Gasterosteus aculeatus (three-spined stickleback): 120831789
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Entry
120831789 CDS
T07457
Name
(RefSeq) LOW QUALITY PROTEIN: versican core protein-like
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
V-set
EGF
Sushi
hEGF
XRCC4_CC
EGF_TEN
EGF_2
Motif
Other DBs
NCBI-GeneID:
120831789
NCBI-ProteinID:
XP_040053485
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All DBs
Position
XIV:complement(199351..223562)
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AA seq
1454 aa
AA seq
DB search
MSRVFLHLEDWSVTPEGRRPWEAELYSRFVLVLNEKKAKIPKPPEGNQDAALRAHWTTAC
GTSPTWPRVASGAPVTSGPRRRGHRAPKGRASSASMTMQNNPPLTGSLGHHVTLPCQFSI
PPISADTPTPGSREELRIKWTKLKKDGEEVVLVTLGGAAKEGQRYAGRLSWQSPQPSGGD
ASLMLGGLRASDAGVYRCEVIHGMEESRETVRLNVSGVVFHYRANASRYTMNLHAAMDAC
RSAGADIATPDHLAAAFEDGLDQCDAGWLADRSVRYPIRTPRPGCYGNLGNRPGVRTYGV
RDASEEYDVYCYVGKLRGEVFYPSSVNAKLTLQEARDKCERHGAVLASPGQLFAAWREGL
NRCDYGWLSDGSARYPVTQPRPQCGGGLLGVRTLYKYPNQTGYPDASDRHGLYCYREPTT
TSPPTTPSEPTSAPGTPTPGPPEPVAHLPTERPPTDQRTPPHTTASAPPTAMSDYDLTDP
LLPMAFPPLPTTRGQPPQLDISQGGQDEGGANSGSGEGGSSDGRSSGAEAVTLVTPTPAW
GETSTGSSRLLKTTTGSGLGGETSRPPRLLALTTVAVAPGTHTPGLGVPGGAVEAGKQPV
VVFKEEVSPETASTFDLDQSSGKPPFHLIIVNVHNQNQSVSHILDILSQSALGLGGPHFP
QVTDLSQGTSKGLQDSRDADPLAVYPIHLPPTVSFVNEKHQVTFETPLPEEARGDQFETA
TPVQVDGDTTPSDYEVIEVHGEETPVPTEETEGSVDFSPDMDQTTSDQTTTDQTTTDKTT
TDRPTTDHPTTDQATTDWPTTDQTTTDQTTTDQTTTDQTTSDRPSTDQTTTTDQTTTDPT
TTHRPTTDQTTTTDQTTTDQTTTDQTTTDRPTSDQTTTDRPTTDQTTRDRSTTDQTTTDQ
TTMDQSAVMTDETEIGGTEPPEAAGVTTGLRAGDPEGSASGEDEASGQDEASAQDPQETT
GYTDMPPLLVYSTRRPPPDDPVTEVASGAEQLSGEGEQGGLVDPLRDHRSYRYNRVAAVT
LRAPTTEVKKDPTPPAPAESMIPIDQRPSSAEESTTSSAHYISEPLYTFDHETRSVPQWA
LVPDPAATPLPNEQFVDYDSQIAPPLVEVRPPTQPAGAVEVSTGLRDPLLCSSSFCLNGG
SCYQRTSQNLCACAPGYTGPRCETEVDECRSNPCLNGATCVDGVSSFTCLCLPSYSGELC
GQDTEVCGLGWEKFQSHCYKYVNHRRTWDAAERECRLHGAHLASVLSQEEQLYVNGLGSD
YQWLGLNDKMFERDFKWTDGNPMQYEHWRPNQPDSFFQSGEDCVVMIWHEGGQWNDVPCN
YHLTFTCKKGTVSCGPPPAVRDTRVFGALKPRYEINALLRYHCKRGFVQRHAPTIRCRAD
GQWDAPKVTCTSPATYSQSLALRRLHHQDHQVHQVHHVPQKPSPQQQQGPSSMLSRWTPP
QRARRQQSANQMRH
NT seq
4365 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtgtgttcctgcaccttgaagactggagcgttacgccggagggaaggaggccc
tgggaggcggagctctactctcgctttgttttggtcctcaacgagaagaaagcgaagatc
ccgaagcctcctgaaggaaaccaggacgcggcgctgcgagcccattggacgacggcctgc
gggacctccccgacgtggccccgagtcgcaagcggcgcacccgtcacctcgggcccccgg
aggcggggccacagggcgcccaaaggaagagcctcatcggcctccatgacgatgcagaac
aaccccccgctgaccggctctctgggtcaccacgtgactttgccgtgtcagttctccatc
ccgccgatttctgcggacactccaacacccggatcccgtgaagagctgaggatcaagtgg
acgaagctgaagaaggacggggaggaggtggtcctggtgaccctggggggggcggcgaag
gagggacagcgttacgcgggccggctgtcgtggcagagcccccagccgtccgggggcgac
gcctccctgatgctgggggggcttagggcgagcgacgcgggggtgtaccgctgtgaggtc
atccacgggatggaggaatcccgggaaaccgtccgcctcaacgtcagcggtgtggtgttc
cactacagggcgaacgccagccgctacaccatgaacttacacgccgccatggatgcatgt
cgctccgcgggcgctgacatcgccacgcccgaccatctggcggccgccttcgaggacggt
ctagaccagtgcgacgccggctggctcgccgaccgctccgtcaggtacccgatcagaacg
ccgcggcccgggtgctacggcaacctggggaaccgaccaggcgtgaggacgtacggcgtc
cgtgacgcctcggaggagtacgacgtgtactgctacgtggggaagctacgcggggaagtc
ttctacccgtcctctgtcaatgctaagctaacgctacaggaagcccgggacaagtgcgag
aggcacggcgccgtgctggcgtctcctggtcagctgtttgcagcctggagggaggggctt
aaccgctgcgactacggctggctgtcggacggcagcgcccgctaccccgtcacgcagccg
cggcctcagtgcggcgggggcttgctgggggtccgcacgctctacaagtaccccaaccag
accggatacccggacgccagtgacaggcacggactctactgctaccgagagccaacgacc
acgagtcccccgacgactccatcagaacccacaagcgcccccggcacgccgacccccgga
ccaccagagcccgtcgcacacctgccaacagagaggcccccaaccgaccaacgcaccccc
ccccacaccacggcctccgcgccccccaccgccatgagcgactacgaccttacagaccct
ttgctccccatggcgtttccccccttacccaccaccagggggcagcccccgcagctcgac
atctcccagggggggcaggacgaggggggcgccaacagcggcagcggggaggggggcagc
agcgacggccgctctagcggggccgaggcggtgactctggtgaccccgacgccggcttgg
ggcgagacctctacagggtccagtcggcttctaaagaccaccaccgggtccgggctgggg
ggggaaacgtccagaccgccacggcttctggccctcaccaccgtggcggtcgcaccagga
actcacaccccgggactgggcgtaccggggggcgcggtggaggcggggaaacagcccgtg
gtcgtttttaaagaggaggtcagccctgaaacggcctcgacctttgacctcgaccagtct
tcaggcaaaccgccgttccacctcatcatcgtcaacgtgcacaatcagaaccagtcggtc
tcccacatcttagacatcctgagccagtcggccctgggcctcggcggtccccacttcccc
caggtcaccgacctctcccaggggaccagcaaggggctccaggacagcagggacgccgat
cctctggcggtctacccgatccacctgccccccaccgtcagcttcgtcaacgaaaaacac
caggtgacctttgagacgccgctgccggaggaagccagaggagatcagtttgagacggcc
acacctgtccaggtagacggggacacgactccctctgactacgaggtcatagaagtccac
ggagaggagacgcccgtccccactgaggagacggagggctccgtggacttctctccagac
atggaccagaccacctctgaccagaccaccacagaccagaccactacagacaagaccacc
acagaccgtcccacgacggaccaccccaccacggaccaggcgaccacggactggcccacc
acagaccagacgaccacagaccagaccacaacggaccagaccaccacagaccagaccacc
tcggaccggcccagcacagaccagaccaccacaacagaccagaccaccacggacccgacc
accacgcaccggcccaccacagatcagaccaccacaacagaccagaccaccactgaccag
acaaccacagaccagactaccacggaccggcccacctcggaccagaccacaacggaccgg
cccaccacagaccagaccaccagggacaggtccaccacggaccagaccaccacagaccag
accaccatggaccagtctgccgtcatgacggacgagacagaaatcggtgggacggagcct
cctgaggcagcaggggtcaccacggggctgcgagcgggggacccagaggggtcggcctcc
ggagaagacgaggcttcgggacaggacgaggcttcggcacaagacccccaggagacgacc
ggctacaccgatatgccgcctttactggtttactccacccggcgaccaccacctgatgac
cctgtcacggaggtggcctcaggtgcagagcagctgtccggagagggggagcagggtggt
ctggttgaccccctcagagatcatcgcagctaccgatataacagagtggcagctgtgact
ttgagagcgccaaccacagaggttaagaaggatccgaccccccctgcccctgccgaatcc
atgatccccatagaccagcgcccatccagcgccgaagagtccaccacgagctccgcccac
tacatctccgagcccttgtacacgtttgaccacgagacccgctccgtgccccagtgggct
ctggtcccggaccctgccgccacccccctgcccaacgagcagtttgtggactatgactca
cagattgccccccctctggtggaggtgcgcccccccacgcagcctgctggcgctgtggag
gtcagcacgggcctcagagatccgctgctctgctcctccagcttctgcctcaatggaggc
tcctgctaccagagaacctcgcagaacctctgcgcctgtgcacccggatacaccgggccg
cgctgtgagacggaggtggacgagtgccggtccaacccgtgtctgaacggagccacctgt
gtggacggagtgagctccttcacctgcctctgcctgcccagctactcgggggagctgtgt
ggacaagacacggaggtctgtggactcgggtgggagaagtttcagtctcactgctacaag
tacgtcaaccaccggcgcacctgggacgccgccgagcgggagtgtcgtctgcacggcgcc
cacctggccagcgtcctgtcccaagaggagcagctgtacgtcaacggtctgggcagtgac
taccagtggctcggcctgaacgacaagatgttcgagagggacttcaagtggacggacggc
aacccgatgcaatacgagcactggaggcccaaccagcccgacagcttcttccagtcgggg
gaggactgcgtggtgatgatctggcacgagggggggcagtggaacgacgtgccctgcaac
taccacctgaccttcacctgcaagaagggcacagtgtcgtgcgggcccccccccgcggtg
agggacacccgggtgttcggggccctgaagcctcgctacgagatcaacgctctgctccgc
taccactgcaagcggggcttcgtccagagacacgcgcccaccatccgttgccgggccgac
ggccagtgggacgccccgaaggtcacctgcacaagcccagcaacttacagccagtcattg
gctctcaggcgcctccaccaccaggaccaccaggtccaccaggtccaccacgtcccccag
aaacccagtccacagcagcagcagggccccagctccatgctgagccgctggacgcctccc
cagagagcgaggaggcagcagagcgccaaccagatgagacactga
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