Gasterosteus aculeatus (three-spined stickleback): 120831888
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Entry
120831888 CDS
T07457
Symbol
grin1a
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1a isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04020
Calcium signaling pathway
gat04080
Neuroactive ligand-receptor interaction
gat04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
120831888 (grin1a)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120831888 (grin1a)
04082 Neuroactive ligand signaling
120831888 (grin1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gat04040
]
120831888 (grin1a)
Ion channels [BR:
gat04040
]
Ligand-gated channels
Glutamate (ionotropic)
120831888 (grin1a)
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
120831888
NCBI-ProteinID:
XP_040053691
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All DBs
Position
14:complement(11700140..11731891)
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AA seq
968 aa
AA seq
DB search
MRLLLLAVLLSCSCARAGCEPKIVNIGAVLSQKRYEQVFKDAVTQANQVYGRDKFKLTAI
SVTHKPNAIQMALSVCEDLISSQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAHVWFDLMREFNWNHIILIVSDDHEGRAAQKRLETL
LEERETKNKKRNYENLDQLSYDNKRGPKAEKVLQFSQETNLTALLLEAKELEARVIILSA
SEEDAAAVYKAARFLNMTGSGYVWLVGEREMSGKALSEAPDGLIGLQLINGKNESAHIND
AVAVVAQSIQELFEKENITEPPRGCVGNTNIWKTGPLFKRVLMSSKYPEGLTGRVEFNDD
GDRKYAHYSILNYQKSRLIQVGIYNGTQVVMNNQRKIIWPGGETEKPQGFQMSTRLKIVT
IHQEPFVYVKPTQLDGTCKEEMTLNGVLIKKVICTGPNETIPGNLSGRPIVPQCCYGFCI
DLLIKLAMTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTIN
NERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLL
DRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFA
MIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELS
TMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGI
GMRKDSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLV
AGGIAAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDTTEASGSQAVAGTPSL
PSSSLETQDDRKSGRADPDPQKKASFRSISTTLASSIKRRRSSKDTQYPPTDITGQLNLS
DPSVSTVV
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgctactgctggcggtgctcctctcgtgctcctgcgcgcgggccggctgcgag
ccgaaaatcgtgaacatcggcgccgtgctcagccagaagagatacgagcaagtcttcaaa
gatgcggtgacccaagccaaccaggtctacggcagggataaattcaagctgaccgccatc
tccgtaacgcacaaacccaacgccatccagatggctctctccgtctgcgaggacctcatc
tccagtcaggtctacgctattctggtgagtcaccctccacagtccaatgaccacctcact
ccaacgcccgtctcatacactgcaggcttctaccgcatccccgtggtggggctcaccacc
cgcatgtccatctactcggacaagagcatccacctgtccttcctgcggacggtccctccc
tattcccaccaggcgcacgtgtggttcgacttgatgcgcgagttcaactggaaccacatc
atcttgatagtgagcgacgaccacgaggggcgtgccgcccagaagaggctcgagaccctc
ttggaggagagggaaacaaagaataaaaaaaggaactatgaaaacctcgaccaactgtcc
tatgacaacaagcgaggaccaaaggcagagaaagtcctccagttcagccaggagactaac
ttaactgccctgctgctggaggccaaagagctggaggcccgagtcatcatcctgtctgcc
agtgaggaggacgctgccgctgtgtacaaggccgcccgcttcctcaacatgacgggctcg
ggctacgtgtggctggtgggcgagcgggagatgtccggtaaagccctgagcgaggcgcca
gacggtctgatcggcctccagctcatcaatgggaagaatgagtcagcccatatcaatgat
gcggtggctgtggtggctcagtctatccaggagctgtttgagaaggagaacatcacagaa
cccccgagaggatgtgtgggcaacaccaacatctggaaaacagggccgctctttaaacgg
gtgctgatgtcgtccaaatacccagagggcctcacaggacgcgtggagttcaatgatgac
ggagacaggaagtacgcccattacagtatactcaactaccagaagagtcgactcattcaa
gtcggcatatacaatggaacgcaggtggtgatgaacaatcagcggaagatcatctggccc
ggaggagagacggagaaaccgcagggcttccagatgtccactcgattaaagatagtgacg
atacaccaggagccatttgtgtatgtgaaacccactcagctggacggaacatgcaaggag
gaaatgactttaaatggagtcttaattaaaaaggttatctgcactgggcccaatgagacc
atcccaggtaacctatcaggacgtccaattgttccccaatgttgttacggattctgtatt
gatctcctcatcaagctggctatgaccatgaacttcacctatgaggtgcatctggtggct
gatgggaaattcggaactcaggagcgggtgaacaacagtaacaagaaagagtggaatggc
atgatgggagagctcctggggggcctggctgacatgattgtagcaccactgactataaac
aacgaacgagcccagtacatcgagttctccaaaccctttaaatatcaaggcctcaccatc
cttgttaaaaaggaaatccctcgcagtacgctggactcgttcatgcagccgttccaaagc
acgctgtggctgctggtgggtctttcggtacatgtggtggcggtgatgctttacctacta
gaccggttcagcccgtttggaagatttaaagtaaacagtgaagaggaagaagaagatgcc
ctcaccctatcctctgctatgtggttctcctggggagtgttactgaattctggaatagga
gaaggtgcgccgcgcagcttctcagcgagaatcctgggtatggtgtgggccgggtttgcc
atgatcattgtggcctcttatactgccaacctggctgccttcctggtgttggaccggcct
gaggagcgcatcaccggcatcaacgacccgaggctgagaaacccatccgacaagttcatc
tacgccacggtgaagcagagctccgtggacatctacttccggcggcaggtggagcttagc
accatgtaccgccacatggagaagcacaactatgagagtgccgccgaggctatccaggcc
gttcgcgacaacaagctgcatgctttcatctgggactctgcggtgctggagtttgaagcc
tcgcagaagtgcgacctggtgaccacgggagagctgtttttccgctcgggctttggcatt
ggcatgcgcaaggacagcccctggaaacagaatgtgtccctggccattctcagttctcat
gagaacggcttcatggaagacctagataaaacctgggtgagataccaggagtgtgactca
cggagcaatgccccagccacactcacctttgaaaacatggcaggagtattcatgcttgtg
gcaggaggaatagccgcagggatcttcctaatcttcattgaaatcgcctataagcggcat
aaagacgcccgcaggaagcagatgcagctcgcctttgcggcggtcaatgtttggaggaag
aacctgcaggacactacggaggcctctggaagtcaagctgtggctgggacgccctcatta
ccctcttcctctctagagactcaggatgataggaaaagtggtagagcagaccccgacccc
caaaagaaagcctcttttaggtccatcagtaccaccctggcctccagcatcaagagacgt
aggtcctccaaagacacgcagtacccacccactgacatcacgggccaactaaacttgtct
gacccgtctgtcagtactgtggtataa
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