Gasterosteus aculeatus (three-spined stickleback): 120831929
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Entry
120831929 CDS
T07457
Name
(RefSeq) nipped-B-like protein isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120831929
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gat03036
]
120831929
Chromosome and associated proteins [BR:
gat03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
120831929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT_EZ
HEAT
Cnd3
Motif
Other DBs
NCBI-GeneID:
120831929
NCBI-ProteinID:
XP_040053789
UniProt:
A0AAQ4Q407
LinkDB
All DBs
Position
XIV:6384711..6403996
Genome browser
AA seq
2661 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTAKSLLYNGRISEEVSNLLVCRDEN
LVTQLAHSLNQVSTEHIELKDNLGNDEPEGDMPMLLQTLLSLNPKIFRDKSVMQQPMLQQ
YKLSQNQVHGSPGSNYQQTSVPQSPSGCFASPQSGSSARFLPQQNSPIPSPYTPQSPADY
MQYNPPSYSQHQQTQQVRNIHDDKVSGQLSSTSSNHNARLGSDEDYINMAHRLGDEENDP
SMRAATFPVKSPESLCSPAGSEEAAKTGSRPPLIMQSPPPDMPPVAAPDLHLTSADRKKK
QKERSKEENELTDKNASYGIVSSPAKESARLTIKLSRVKLADSDQSGELPQRPLLDSEHE
TDLTNNSNTPMSRTAQDPSHRFVAEEQANCKPVPVRPNSKESGVVSGVVFDDAEIDTLAE
IERIERESASEKERWSKEVQDKDKPLKKRKQDTYPQEPGGDSGDGPTVQGGNTDSKLRSK
KTNAASNGASRPALMVSIDLQQAGRIKGQPVVVLEAQTFCEDHLRHLKTKPDGKVDKVAA
NRPGIIKQNADNPRKSCSDRQPEALKQKPESQRESKHKHEGKTGSGKKHSEDRRLDTPRP
KHDKHSEQRSKEEKNHNIHRPHISNPETPKTASKAERNSKHGDGKARDRERDKNKEKERD
RDKDKVVDRDDRDKDREKEKDRVKDKDRDYDKDKDKIGDKNREKVRDREGDKEKQEKNKT
RDRDKDRKHKTSRENCSRPSPDRPTKPDSPRVKQDDGGKSTDLNGRQKTESSGLQNAQNK
KDRKSGDGSASCQAGNNKQQPLETKHCEFPSYLLGGKSGSLKNFVIPKLKRDVKDLQLPD
KLIESWTEPLVRLERLSLIKDLNKGTKPVVVLNKLNLDEVKRIIKESRNTNSTRFLDKSG
RENKRKHSVVSKKSKYAELEEDSDDSDDNDDGDNSDNESPKKRYKKDHDKSWKHEERKGT
GQHRSGGSHGARRGSGSGHREKSPDGSDQDSPAPSLRDIARKLKKKEKQKTKKAYDSKLT
PEEKLDSSTFKRFTANMDSIIESLEDVDLTAADDDEIPEELLLGKHQLNELGNDSAKIKA
MCIFNKCSTKKLVKMLNILEKNIQDSVKLSTLMNHENDSMDEERLWRDLIMERVAKSADA
CLTALNIMTSPHMPKAVYIEDVIERVLQYTKFHLQNSLYPQYDPVYRKGGMHTSKSKRAK
ISTHKQKVVVMLYDKVCDIVSNISELLEIQLLTDTTILQVSTLGITPFFVENVSELQLCA
ITLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNNDSDEEPLHIQMVTALVL
QLIQCVVRLPSERDAEGEHNKKVDKDVFITNSYETAMRTAQNFLSVFLKKCGSKQGEDDY
RPLFENFVHDLLSAVNRPEWPAAELLLSLLGRLLVHQFSNKHTEMALRVASLDYLGTVAS
SLRKDAVNSNVDQKAIDRILRETQGSDEIPKLQKALLDYIHEHMETDPALVFARKFYIAQ
WFRDTITEADKAVKSQNDDEDLRHQSMDVDSTEEIVQRAETRKKFLRKVMKTSPSDWSSF
SINSDTVAYEDSCLIVRYLASMRPFSQSFDIYLSQILRVLGESAIAVRTKAMKCLSEVVA
VDPSILARLDMQRGVHCRLMDNSTSVREAAVELLGRFVLSRPQLIEQYYDMLIERILDTG
ISVRKRVIKILRDICLELPDFHKITEMCVRMIRRVNDEEGIKKLVNETFQKIWFTPTPSH
DKNAMTRKILNITDVVSACKDTGYDWFEQLLQNLLKSEEQASYKPAKKACVQLVDNLVEH
ILKSEESIADCEDKGVISGRLVACITTLYLFTKIRAQLMVKHAMTLQPYLTTKCNTQNDF
VVICNVAKILELVVPLMEQPSENFLTTIEEDLMKLIIKYGMTVVQHSVSCLGAVVNKVTH
NYKFVWACFNRYYGALAKLKTQHQEDANSLTLAANKPTLLRALFTVGALCRHFDFDQEEF
KGANKIVIKDKVLELLLYFTTHEDEEVQIKALTGLGFQFIMHPEVMFVQDVKVLYNNTLS
DETSLVTLKIQVLKNLQTYLSEEDSRMQVADREWKNQAKQEDLKEMGDISSGMSSSIMQI
YLKQVLESFFHSQSTVRHFALSVIILTLSQGLVHPVQCVPYLIAMGTDPEPTMKNKADQQ
LAEIDKKYCGFIHMKAVAGLKMSYQVQQAINGSKGAVIRGFRHDDSDSSLCSHLYTLVRG
NRQHRRAFLISLLNLFDDSSKTEVNRLLFIADNLAYFPYQTQEEPLFIMHHVDITLSVSG
SNLLQSFKESLQKGSVQKEKKTTMTKKLMKTKKKKKKKKKEKKPQRRKNSSDDDDEIEYE
EEDNEQSSSTSSSSDEEEEEVVHSQKKLALFDSDGDEDEDAVMDRLPENPNPLLDFASAS
QGILLLLVLKQHLKNLYGFSDSKIQKYSPTESAKVYDKAVNRKSKVHFNPRQTLEYLKRD
LDNADLSIEIKRNIVKQYLDFKVLMEHLDRDEEDEEGEASANARNKAITALLKVPKSSNQ
NHTKNEPVPVETDEEESEEEEAPVRKPKKGVESAEDTGHMNERVKAMDIIAIWCPKYKDR
PQIARVIQRIKTGYSIHWMTGSYSGSWTEVKKREGRKKVPWVDNIKESDIIYKKISLSSG
HKLTNKVAETLRALYAAKDGD
NT seq
7986 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtgatatgcctcatgttcccatcactactcttgctggaattgctagcctgaca
gacttgttgaaccagctgcccttgccgtctcctctccctgccaccactgctaagagtctg
ctctacaatggaaggatctctgaagaggtcagcaacctgctggtgtgtcgggacgaaaat
ctggtgactcaactggcacacagccttaaccaagtgtccactgaacacatagagttgaag
gacaacttggggaacgatgaacctgagggtgacatgccaatgcttctacaaactctgctg
tccttaaaccccaaaatcttcagggacaaaagtgtaatgcagcagccaatgttgcaacag
tataaactatctcaaaatcaggtgcatgggagcccaggatcaaactatcagcaaacctct
gtcccccaaagcccgtctggatgttttgcctccccacagtctggatcaagtgctcggttc
ttaccccagcagaacagccctatacccagtccttatacccctcagagtcctgcagactac
atgcagtacaatccccccagttactctcagcaccaacagacacagcaggttagaaatatc
catgacgacaaggtctcaggtcagctatcaagcacttcatccaatcataatgcgaggcta
ggctcagatgaagactacatcaacatggctcacagactgggagatgaggagaacgacccc
tccatgagggctgccacgtttccagttaaatcacccgagtctttgtgttcccctgctggg
agtgaggaggccgcaaaaacagggtccaggcctccccttatcatgcagtcccctccacct
gatatgccaccagttgcagcacctgacttgcaccttacctctgctgaccgcaaaaaaaag
cagaaagaaaggagtaaagaagaaaatgagctgacagacaaaaatgcctcgtatggcatt
gttagttctccagcaaaagagtccgccaggctgactattaaactgtcgcgggtcaagctt
gccgactcggatcaatctggagagctgcctcagaggccacttcttgattcagaacatgaa
actgacttgacgaataatagtaatactccgatgtcaaggactgcccaggacccgtcacac
aggttcgtggccgaggagcaggcgaactgtaagccagttcctgttcggccaaatagcaag
gagtccggagtcgtcagtggggttgtgtttgatgatgccgagatagacacactggcagag
atcgagagaatagaacgcgagtcggccagtgaaaaagagagatggtctaaagaagtccag
gataaagataagccactgaagaaacggaagcaagacacgtatcctcaggaacctggaggc
gattcaggggacgggcctacggtacaaggaggcaacactgatagcaagttgagatccaag
aagacaaatgctgcaagtaacggggccagtcgacctgccttgatggtcagtattgatctg
cagcaagctggcagaatcaagggacagcctgtggtggtcctggaagcacagacgttttgt
gaggaccacctgcggcacctaaagacaaagcccgatggaaaggtagacaaagttgcagca
aacagacctgggatcatcaaacagaatgcagacaaccccaggaagtcctgctcggacagg
caaccagaagccctgaaacagaagccggaaagccaacgcgaatccaaacacaagcatgag
ggcaaaaccggcagtggcaagaaacactcggaagaccgacggctagacacaccgcgaccg
aagcatgacaagcactcagagcagcgcagcaaagaggaaaagaaccacaacattcaccga
ccccatatcagtaaccccgaaactccgaaaaccgcgagcaaggcagagcgcaactccaaa
cacggtgatggcaaagccagggaccgagagagagacaagaacaaagagaaagagagagac
cgagataaagacaaagttgtggatagagatgacagggataaggacagagagaaagagaag
gatagggttaaggacaaagatagagactacgataaagataaggacaagattggagataag
aacagggaaaaggttcgagatagggaaggagataaagaaaaacaagagaaaaacaaaaca
agggatagggacaaagacaggaagcacaagacgtcaagggaaaactgcagcagaccctct
cctgacaggcctacgaagcccgacagcccgagagtgaagcaagacgatggtggaaaatcc
accgacctgaatggtcggcagaagaccgagagttctggccttcaaaacgcacagaataag
aaagaccggaaaagtggggatggcagcgccagctgccaagctggaaacaacaagcagcaa
cctttggagacaaaacattgtgaattcccctcatacctgctgggtggcaagtctggaagt
ctgaagaactttgtgattccaaaattaaaacgggatgtgaaagatctccaacttccagac
aaactgattgagagctggaccgaacccttagtccggctggagaggctgtcgctgataaag
gacttgaacaaaggcactaagcccgtcgtcgtgctcaacaaactcaacctcgacgaggta
aaaaggatcattaaggaaagcaggaacacaaacagcaccagattcctcgacaaatcgggg
agagaaaacaagcgaaaacacagtgtggtcagtaagaaaagcaagtacgctgagttggag
gaagacagcgatgactctgatgataacgacgatggcgataactctgacaatgaatctcca
aagaaacgctacaagaaagatcacgacaagtcctggaaacacgaagagaggaagggtact
gggcagcaccggagcggtgggtcgcacggcgctcgccgggggtccggcagcggtcaccgc
gaaaagagtccagatggttcagaccaagactctccagcaccaagcttgcgtgacattgcc
agaaaattgaagaaaaaggagaaacaaaaaaccaagaaagcgtacgattccaagctgaca
ccagaggaaaagttggactcctccacatttaagagattcacggccaacatggacagcatt
atcgagagcctcgaggacgtagacctcaccgctgcagatgatgatgagataccggaggag
ctcttgctcggaaagcaccaattgaacgagctaggcaacgactctgctaagatcaaagca
atgtgcatctttaacaagtgttcgactaagaaactggtgaaaatgttgaatatcctcgag
aagaacatccaggacagcgtcaaactttccacactaatgaatcatgaaaatgattcaatg
gacgaggagcggttgtggcgtgacctcatcatggagcgggttgctaagtctgccgatgcc
tgtttgactgcactcaacatcatgacatcgccacacatgcccaaggcagtttatatagaa
gatgtgatcgagagggtgctgcagtacacaaagttccatctgcaaaattctttataccct
cagtatgacccagtctacagaaaaggtggcatgcatacttcaaagtccaagagagcaaag
atttccacccacaaacagaaggtggtagtgatgctctacgacaaagtctgtgatattgtg
agcaatatttcggagcttctggaaatccagctgctaactgacaccactattctccaggtg
tccactctgggcattacacctttctttgtggagaatgtcagcgaactgcagttatgtgcc
atcacacttgtgaccgcagtgttctcccgttacgagaagcacaggcagctcattcttgaa
gagatcttcacctccttagctagactgcctactagcaagcgcagccttaggaactttaga
ctaaacaatgattcggatgaggagcctttgcatatccagatggtcacagcgctggttctt
cagctcatccagtgtgtggttcgcctcccctcagagagggacgcagaaggtgaacataat
aagaaggtggataaagatgtttttatcacaaactcctatgaaacggccatgaggacggct
cagaacttcctgtctgtgtttctcaagaagtgtggcagcaagcaaggcgaggatgactac
aggcctctgtttgagaactttgtccatgacctgctgtctgcagtcaaccggcctgagtgg
cctgcagctgaactgctgctcagtttactgggccggctgctggtgcaccagttcagtaac
aagcacaccgaaatggcactcagggtggcatcgctggactacctcggcactgtcgcttct
agcctgcgcaaagatgccgtcaatagcaacgtggaccaaaaagccatcgaccgcattctc
agagagactcaaggcagtgatgagatcccgaaactccagaaggctttgctggactacata
catgagcacatggagaccgatccagctctagtgtttgccaggaagttttatattgctcag
tggttcagggacactatcaccgaggcagacaaagcggtaaagtctcagaatgacgatgag
gacctcagacaccaatccatggatgttgattcaactgaggagattgtacaacgggccgag
acgcggaagaagttcctccgcaaggttatgaagacctcaccatcagattggagttctttc
agtataaactctgacaccgtagcctatgaggactcctgcctgatcgtcagatatctggcc
tccatgaggccgttctcacagagctttgatatttatttatcacagattctgagagtgctg
ggggagagtgccatcgcagtccgaactaaagccatgaagtgtctgtctgaagtagtagcc
gtggatccaagtattcttgctcggttggatatgcagcgtggagttcactgtcgcctcatg
gataactccaccagtgtgcgagaggccgccgtggagctgctcggccgctttgtgctcagt
cgaccgcagctcattgagcagtactacgacatgctcattgaaaggatattggacaccggt
atcagtgtgaggaagagggtcattaagatcttgagggatatttgccttgagctgccggac
ttccataagatcaccgagatgtgtgtcaggatgatccggagggtcaacgacgaagagggg
atcaagaaattggtgaatgagacgttccagaaaatctggttcactcccacgccgagtcat
gacaaaaatgccatgacccggaagatcctgaacatcacggatgtggtctctgcatgtaaa
gatacaggctacgattggtttgagcagcttctacaaaatctactgaagtccgaagagcaa
gcttcgtacaaacccgccaagaaagcctgcgttcagttagtggacaatctagtggaacac
atactgaaatctgaggagtctatcgcagactgtgaggacaaaggggtcatctcgggtcgt
ctggtagcctgcatcaccacgctctacctgttcaccaagatcagagcacagttaatggtc
aaacatgccatgaccctgcagccctacttgaccaccaagtgcaacactcagaatgacttt
gtggtgatatgtaacgtggcgaagatcttggagctggtggtgcctctgatggaacaaccg
agtgagaacttcctcactaccatagaagaagacctgatgaagctcattatcaaatacggc
atgacggtcgtgcagcactctgtaagctgtctcggtgctgttgtcaacaaggtcacacac
aactacaagtttgtctgggcttgtttcaaccgctactatggagcgctggcaaaactgaag
acacagcaccaggaggacgccaacagcttgactctggctgcgaacaaacctactctcctg
cgcgcactcttcactgtgggggctctctgccgacactttgattttgaccaagaggagttc
aagggtgctaacaagattgtcatcaaggataaagtgctggagcttctgttgtacttcacc
actcacgaggatgaagaggtccagatcaaggccctcacgggtctaggcttccagttcatc
atgcatccagaagtcatgtttgtgcaggatgtgaaggttctatataacaatacgctgtca
gatgaaaccagtttagtcactctaaagatccaggtactgaaaaacctgcagacatacctg
tcagaggaggactctcgaatgcaggtggccgatcgcgaatggaagaatcaagctaagcag
gaagatctgaaggagatgggggacatctcatcaggcatgagcagctccataatgcagatt
tacctgaagcaggtgctcgagtcctttttccactcccagtccactgttcggcactttgcc
ctgagtgtcatcatactgactctcagccagggcctcgtccaccctgttcagtgtgtgccc
tacctgatagcaatgggaacagaccctgagccaaccatgaagaacaaggcggatcaacaa
ttggcagagatcgacaagaaatattgcggcttcatccacatgaaggctgtggcagggttg
aagatgtcttatcaggtgcaacaggcaataaatggatccaaaggcgcagtgattcgaggt
tttcgccacgatgactcggactcttccctctgctctcatctctacactctggtccgaggg
aatcgacaacacaggcgggctttcctcatttccctgctcaacctgtttgacgacagctcc
aaaactgaggtgaacaggctgctgttcatagccgacaacttggcctacttcccctaccag
acccaggaggagccactttttatcatgcaccatgtggatattactctgtctgtatctggt
agcaacctgctccagtcgttcaaggagtctttacagaaaggatccgtacaaaaggaaaag
aagacaacgatgacgaagaagttgatgaagacaaagaagaaaaagaagaagaagaagaag
gagaagaagcctcagagaagaaaaaacagctctgatgacgacgacgaaattgaatacgaa
gaagaggacaatgagcagagcagcagcacatctagcagcagtgacgaggaggaggaagag
gtggttcacagccaaaagaaactggcactctttgactcagacggcgacgaggacgaggat
gcagtgatggaccgtctgcctgaaaatcccaaccctctgctggactttgccagtgcgtca
cagggaattctgctgctgctggttctaaagcaacatctgaagaatctgtacggcttctcg
gacagcaaaatccagaagtattccccgacagagtccgccaaggtgtacgacaaggcagtg
aacaggaaatctaaggtgcacttcaaccctcgccagacactggagtacctgaagagggac
ctcgacaacgcagatctcagcatcgagatcaaaaggaatatcgtgaaacaatatttggac
ttcaaggtactgatggaacacttggatcgcgacgaagaggacgaggagggtgaagcaagt
gccaatgccagaaacaaagccattactgcactgctgaaggtcccaaaatcttccaaccag
aaccacactaaaaatgaacccgttcccgtggagacagatgaggaggagagtgaggaagaa
gaggctcctgtgcggaagccaaaaaaaggggtggagtccgcagaggacacaggtcacatg
aacgagagagtgaaggccatggacatcattgccatctggtgtcccaaatacaaagacaga
ccgcagattgccagggtcatccagaggatcaaaactggctacagtatacactggatgact
ggatcttactctggctcgtggaccgaggtaaagaaacgggaaggtcgcaaaaaggttccc
tgggttgacaacatcaaggagtcagacatcatttacaagaaaatatctttgtcaagtgga
cacaagctgacgaacaaagtggcagagacgttacgggcgctatacgctgccaaggacggg
gactaa
DBGET
integrated database retrieval system
