Gasterosteus aculeatus (three-spined stickleback): 120831939
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Entry
120831939 CDS
T07457
Symbol
rnf165a
Name
(RefSeq) E3 ubiquitin-protein ligase RNF165 isoform X1
KO
K17821
E3 ubiquitin-protein ligase RNF165 [EC:
2.3.2.27
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gat04121
]
120831939 (rnf165a)
Enzymes [BR:
gat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120831939 (rnf165a)
Ubiquitin system [BR:
gat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120831939 (rnf165a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
U-box_ZFPL1
zf-RING_Vps41
RINGv
zf-RING_16
Prok-RING_4
zf-Nse
zf-RING_10
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
120831939
NCBI-ProteinID:
XP_040053817
LinkDB
All DBs
Position
14:complement(3599097..3610584)
Genome browser
AA seq
346 aa
AA seq
DB search
MVLVHVGYLVLPVFGSVRNRGAHFTRQQHSHATSCRHFHLGAPQAPISAEFPLGHASQPP
QTGLAPHLPPAHHPPLTALPAAPQFQDVPGPPFLPQALHQQYLIQQQLLEAQHRRILPHS
RRTQERLPLNPHRLRSGYEFPPPLHVPQQMTQQQQRYLAEGTDWDLSVDAGLPHHQYQLQ
QLPQHYQHYLASPRMHHFPRNTSSAQVVVHEIRNYPYPQLHLLALQSLNPSRHATAVRES
YEELLQLEDRLGSVSRGAIQTTIERFTFPHKYKKRKPLLLKIGEEEETDVDEKCTICLSM
LEDAEDVRRLPCMHLFHQGCVDQWLATSRKCPICRVDIETQLNPDS
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggtgttagtacatgttggatatctggttcttcccgtctttggatcagttagaaataga
ggagcacacttcaccaggcagcaacacagccatgctacctcctgccgacactttcacctg
ggcgccccccaggcccccatctcagccgagttccctctgggacacgccagccagccgcct
cagaccggcctcgccccccacctgcccccggcgcaccacccgcccctaactgccctgccc
gcggcccctcagttccaggacgtgccggggcctccattcctacctcaggccttacaccag
caatacctcatccagcagcagcttctggaagcgcagcatcgcaggatcctcccgcactcc
agaagaacccaggagcgcctccccctgaaccctcaccgactgcgctcaggctacgagttc
ccccctcccctccacgtcccccagcaaatgacccagcagcagcagcggtacctggccgaa
ggcaccgactgggatctcagcgtagatgccggcctcccccaccaccagtaccagctccag
cagcttccacagcactatcagcattacctggcctccccccgcatgcaccacttccccagg
aacacgtcctctgcacaagtggttgtgcatgaaatccgaaactacccgtaccctcagctg
cacctgttggctctgcaaagcctgaatccttcgaggcacgccaccgcggtgcgagaaagc
tacgaggagctgttgcagctagaggaccgtctggggagtgtcagtagaggagcgatccag
accaccatagagcgattcacctttcctcacaaatacaagaagagaaagcccctgctgctg
aagatcggggaagaggaggaaacggatgtggacgagaaatgcaccatctgtttgtccatg
ctggaggacgcagaggacgtcaggagattgccctgcatgcacctcttccaccagggctgc
gtggaccaatggctggccaccagcaggaagtgtcccatctgtcgagttgacatcgaaaca
cagctgaaccccgacagctga
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integrated database retrieval system
