Gasterosteus aculeatus (three-spined stickleback): 120831959
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Entry
120831959 CDS
T07457
Symbol
prdm12b
Name
(RefSeq) PR domain zinc finger protein 12b isoform X1
KO
K24255
PR domain zinc finger protein 12 [EC:2.1.1.-]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gat03036
]
120831959 (prdm12b)
Chromosome and associated proteins [BR:
gat03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
120831959 (prdm12b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_jaz
zf-met
zf-C2H2_2
zf-C2H2_15
zf-C2H2_7th_ZNF462
CBM_3
zf-C2H2_6
zf-BED
zf-Di19
Zn_ribbon_Elf1
Motif
Other DBs
NCBI-GeneID:
120831959
NCBI-ProteinID:
XP_040053860
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All DBs
Position
XIV:5853518..5857244
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AA seq
370 aa
AA seq
DB search
MGSVLPADALALKSGFKCPSRSLSDVITSDILHSFLYGRWRNVLGEHLAEERHSGSPKTA
FTAEVLAQSFVGEVQKLSSLVLPSEVIIAQSSIPGEGLGIFSKTWIKAGTEMGPFTGRVL
SPEHVDLLKNNNLMWEVFNEDGTVRYFIDASQEDQRSWMTYIKCARNEQEQNLEVVQIGS
SIFYKASETIPPDQELLVWYGNTQNTFLGIPGVPGIDEEHLKKTRSEDSHPCEGPSSCSP
PAATTTAGRMRCVICHRGFNSRSNLRSHMRIHTLDKPFVCRFCNRRFSQSSTLRNHVRLH
TGERPYKCHVCQSAYSQLAGLRAHQKSARHKPAAHAADVTSKVSPPPPQMTAVPHQHQMP
MVHHIPTMVL
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgggctccgtgctacccgccgacgctttggctctcaagtctggatttaagtgtccgagt
cgctcgctctcggacgtgatcacctcggacatcctgcacagcttcctgtacggcaggtgg
aggaacgtgctgggcgaacacctggcggaggagcggcacagcggcagccccaagaccgcg
ttcaccgcggaggtgctggcccagtccttcgtcggagaggtgcagaagctgtccagcctg
gtgcttcccagcgaggtgatcatcgcccagagctccatccccggggaaggcctgggcatc
ttctcgaagacctggatcaaagcgggaaccgagatgggtcccttcacggggagggtcctg
tccccagaacacgtggacctgctcaagaacaacaacctcatgtgggaggtgttcaacgag
gacggcacggtgcgctacttcatcgacgccagccaggaggaccagcgcagctggatgacc
tacatcaagtgcgcgaggaatgaacaagagcaaaacctggaggtggtgcagatcggcagc
agcatcttctacaaggcgtccgagactatcccaccggaccaggagcttctcgtctggtac
ggaaacacccaaaacacgttcctggggatccccggagttccagggatagatgaagaacac
ctgaagaaaaccaggagtgaagactcccacccctgcgagggcccttcctcctgctcccca
cccgccgccaccaccacggccggccggatgcgctgcgtcatctgccaccgcggcttcaac
tcccgcagcaacctgcgctcccacatgcgcatccacaccctggacaagcccttcgtctgc
cgcttctgcaaccgccgcttcagccagtcgtccacgctgcggaaccacgtccgcctgcac
accggggagcggccctacaagtgtcacgtctgccagagcgcctactcccagctggcgggc
ctgcgggcgcaccagaagagcgcgcggcacaaaccggcggcgcacgccgccgacgtgacg
tccaaggtgtcccctcctcccccgcagatgacggccgtgccccaccagcaccagatgccc
atggtgcaccacatccccaccatggtgctatga
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