KEGG   Gasterosteus aculeatus (three-spined stickleback): 120831976
Entry
120831976         CDS       T07457                                 
Symbol
lamc3
Name
(RefSeq) laminin subunit gamma-3 isoform X1
  KO
K06247  laminin, gamma 3
Organism
gat  Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04510  Focal adhesion
gat04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:gat00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    120831976 (lamc3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    120831976 (lamc3)
SSDB
Motif
Pfam: Laminin_N Laminin_EGF Laminin_B FliE
Other DBs
NCBI-GeneID: 120831976
NCBI-ProteinID: XP_040053896
LinkDB
Position
XIV:2862978..2934166
AA seq 1631 aa
METSFAVSSVLPSLLLSLHLHCSLLAWAAMDSCIDEEGGPSRCMPKFENVAFNRTVVTSN
VCGSPPEDYCMQTGSTRSCRHCDASHPDLSHGAGLLTDFHRNEEPTWWQSQSMYYGVQHP
SSVNLTLHLGKAFEITYVRLKFYTSRPESFAIYKRTAEGGSWVPYQFYSASCRKTYGKDA
KAYIRPGDDERTALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDQSAVLKEWVTATDLL
ISLDRLNTFGDEFFKDAKVLRSYFYAISDFSVGGRCKCNGHASECVASEHRGLVCSCQHH
TAGDDCQRCQPFYQDRPWFRATGDSANECLKCNCSGRSDECVFDAEQYRSTGSGGRCVSC
RDNTDGPHCERCRQDHYRASAEEPCLPCNCNVNGSVSLQCDGEGRCACSAGVTGEKCDAC
RAGFHSLGHGGCRPCECDPGGSVDDCSPLDGHCPCKPNVEGQSCDRCKPGFFNLEPVNPA
GCQACFCSGHSLACSSSHRYAAASITSDFLEDQDGWLGEFSGGQQYTLLWKEGEVYLLPL
TEEDVGFYKAPEKFLGQQVYSYGQLLSITFTSETPELLPHRVTLLLQGAGVTLSADLSPQ
PALGGGLTSQRSFVVRLHENEMRFQPPLSASAFQQLLNNLTALRISNAGGHNYTSQLAGV
TLTSALVPSGAAHPPAPWVESCSCPPAFTGQFCERCAPGFTREDSARGPLSTCVPCNCHQ
HGTCHPETGACECSDFTAGMTCERCRAGYHGNAVTGTPGDCRPCPCPGRTSCAEIAKTGQ
VVCTNCPAGQTGMRCQMCEDGYYGDPLGQSGEARACARCDCSGNVDFNALGTCDRVTGEC
LKCLGHTEGDRCQRCQRGFYGDARSQSAGQKCKPCSCNPKGTSGRVNECHPQTGECQCLG
HVTGRDCSSCDGGFFNLQPGVGCERCKCNPIGSASAACHPSTGQCVCRAGVEGVLCDSCR
VGFFGFSSRGCRACNCDPMGSVSMQCHGNGTCHCRQGFVGYKCDKCEMNYFHSSATHQCE
ECPVCYGLVKKQAEQMRTRLQDLEKLLAHFDCRGRSGKRHPLLKYPMARLHEHGDQGEDA
LPNALEDFLAFQEAREAFIKHFSLLEASHGTLLAQLHGITSTLNCSISVTEEEGKERRKE
GGSKGACQTFTQTAFMVTASQEQLKQATRDLDNMIIPFEVPSEPNKWNILVNDSRALMKS
HGETADHIEAVASRAARVSQQTLGLLADLLQDNSTEEYTGNLTEQITRMRRQRADLTSRV
NDAAAEQLALEEEAAGLKLALGNITSSLHQMSPTDAGPSPEPDQTPPTDRTTRWVEDLLK
QKEELDQQIQMKDKLISKIREEVEPLKHAAGQKMEVMVDISEMQADAEGAKVAALSSVVT
GKEVESDAIALHRELQYMVREFPRRRTQTEAAVKKGRPLEEKVLADVRKKVSQIEKMLKP
ALENSSLSSNATKEAERRAHAVAKESKAILTQAKHTRTASAHLDSHIDSALKQLAEQETL
ADTLSSQITSEPEASLAGVMEDMEAAKLQLKAYSATLTELISSIDGNVPLERFHRLLDET
ARRLSVLRGSVDSPALVSKIQRLQSAAKEQHSRMSFIEQDLQEIREERDSLRDIALNLPQ
SCPRATGAAGG
NT seq 4896 nt   +upstreamnt  +downstreamnt
atggaaacgtccttcgccgtgagctctgtcctcccgtccctgctgctctctcttcatctg
cactgcagcctcctcgcttgggccgcgatggactcctgcatcgacgaggagggcgggccg
agccgctgcatgcccaagtttgagaacgtcgccttcaatcgcacggtggtgacgtccaac
gtgtgcggctcgccgcccgaggactactgcatgcagaccggctccacgcgctcgtgccgc
cactgcgacgcgtcccatccggacctgagccacggcgccggcctcctgacagacttccac
aggaacgaggagcccacgtggtggcaaagccagtccatgtactatggtgtccagcaccca
agttccgtcaacctcaccctccacctggggaaggctttcgagataacctacgtgcgattg
aaattctacaccagtcgtccggagagcttcgccatctacaagcgcacggcggaaggtggc
tcctgggtgccttaccagttttacagcgcctcctgtaggaagacctacgggaaggacgcc
aaggcctacatccgcccgggagatgacgagaggacggctttgtgcacggacgagttcagc
gacatctcccccctcaccggggggaacgtggcgttctccaccctggagggacggcccagt
gcgtacaactttgatcaaagcgcggtgttgaaggaatgggtcacagccactgacctgctc
atctctttggacaggcttaacacctttggagacgagttcttcaaggatgccaaagtgttg
cgctcgtacttctatgccatctctgatttctccgtgggtggcagatgcaagtgtaatggc
cacgccagcgagtgcgtggcgtcggagcaccggggcctggtgtgctcctgccagcatcac
acagcgggggacgactgccagagatgccagcccttctaccaggaccgaccctggttcagg
gccacgggggactccgccaacgagtgtttgaagtgcaactgcagtgggaggtcggacgag
tgcgtgttcgacgccgagcagtaccgcagcaccggcagcggggggcgctgtgtgagctgc
agagacaacaccgacgggccccattgtgagcgctgcagacaggaccactacagggcgtcc
gccgaggagccctgcctgccatgcaactgcaacgtcaacggttcggtgagtctgcagtgt
gatggagaaggaaggtgtgcgtgttcagccggcgtgacgggggagaagtgtgacgcatgt
cgggccggctttcactcgctcggccacggcggctgcaggccctgcgagtgcgaccccggc
ggcagcgtggacgactgctcccccctcgacggacattgtccctgcaagcccaacgtggag
gggcagagctgtgacagatgcaagccaggctttttcaaccttgagccagtgaacccggcg
ggatgccaggcctgtttctgctccggccactcgctggcctgctcctcctcccatcgctac
gccgccgccagcatcacttctgacttcctcgaagatcaggacggctggctgggggagttc
tccggggggcagcagtacaccctgctgtggaaggaaggtgaagtctacctgctgcctctc
accgaggaagacgtcggcttctacaaagcgcccgagaaattcctgggtcagcaagtctac
agctacggccagctcctctccatcaccttcacctctgagacccccgagctgctcccccac
cgcgtcaccttgctcctccagggcgccggagtcaccctctccgctgacctttcaccccag
ccggcgcttggcggcggcctcacatcgcagcgatccttcgtcgtcaggcttcatgaaaac
gagatgagattccaacctcctttgtctgcctctgcgttccaacaactccttaacaacctg
acggcgctcagaatcagcaacgccggaggacacaactacacgtcgcagctcgcgggggtc
accctgacctcggctctcgtcccctccggcgccgcccaccctcctgccccgtgggtggag
tcctgttcctgccccccggcgtttacgggccagttttgcgagcgctgtgccccaggcttc
acccgggaagactccgccagggggcctctctccacgtgtgtgccatgcaactgccaccag
cacggaacctgccacccagagacaggcgcgtgcgagtgctccgacttcaccgccgggatg
acctgcgagcgctgccgggctggttaccacggcaacgctgtgactggcacgcccggtgat
tgtcggccgtgcccctgcccgggccgcaccagctgtgccgaaattgcgaaaacgggacag
gtggtgtgcaccaactgccccgcaggacagacaggcatgcgctgtcagatgtgcgaagac
ggttactacggcgaccccctgggacaatccggtgaagctcgggcgtgcgcgagatgcgac
tgcagcggcaacgtggacttcaacgcgctgggaacgtgtgaccgcgtgaccggggaatgc
ctgaaatgcctgggacacaccgagggcgaccgctgccagcgctgccagcggggtttctac
ggcgacgcccggagccagagcgctgggcagaagtgcaagccgtgcagctgcaatcctaaa
ggaacctctggacgcgtaaatgagtgccaccctcagacgggagaatgccagtgcctcggt
catgtgaccggacgggattgcagttcttgcgatggcggcttcttcaacctgcaaccaggt
gtaggatgcgagaggtgcaagtgcaatccgattggctcagcctccgccgcgtgtcaccca
tccacagggcagtgcgtgtgtcgcgccggagtggagggcgtgctgtgcgactcctgccgc
gtcggcttctttggattctcgtcccgagggtgtagagcctgtaactgtgacccaatgggc
tccgtctcgatgcagtgccacggcaacggcacctgccactgccgccagggctttgtgggt
tacaagtgtgacaaatgtgagatgaactacttccacagcagcgccacgcaccagtgtgag
gaatgccccgtctgctacggcctcgtcaagaagcaggcagaacagatgaggactcgcctg
caggatctggagaagcttctggctcactttgactgccgtggtagatccgggaagcggcac
ccgctgctgaagtatcccatggccaggctgcatgagcacggggatcagggggaggacgct
ctgcccaatgctctggaggatttcctggccttccaagaggctcgggaggccttcataaaa
catttttcgctgctcgaagcttcccacggcacactcttagcccagctgcacggcattaca
tccacgctgaactgcagcatcagcgtgacggaggaagaggggaaggagaggaggaaggag
ggagggagcaagggcgcgtgtcaaaccttcacacaaaccgcgttcatggtcacggcgtct
caggaacagctcaagcaggcaacgcgggacctggacaacatgatcattccttttgaggtg
ccgtcagaacccaacaaatggaacattttggtcaatgactcgcgggccctgatgaaaagc
cacggagagactgcagaccacattgaggccgtggccagcagggcggccagagtctcgcag
cagaccctgggtctcctggcagatctcctgcaggacaactccacggaggagtacaccggg
aaccttacggagcagataacacgaatgcggcggcagagggcggacctgacgtcacgggtc
aatgacgccgccgctgagcagctggccctggaggaggaggctgctggtttaaagctcgcc
ctgggaaacatcacatcatccttacatcagatgtctccgaccgacgccggcccctcgcca
gagcccgaccagacccccccaaccgaccgtacgacacggtgggtggaggacctgctaaaa
caaaaagaagagctggaccagcaaattcagatgaaagacaagctcatcagtaagatcaga
gaggaggtggagcctctgaaacacgctgccggccaaaagatggaggtgatggttgacatt
agtgagatgcaagctgacgctgaaggggcaaaggtcgcggccctgtcgtccgtggtgacg
gggaaagaggtggagtctgacgccatcgccctgcacagggaactgcaatacatggtgagg
gagtttccccgtcggcggacccagaccgaggcggccgtgaagaaggggagacccctggag
gaaaaggttctagcagacgtcaggaagaaggtctcacagatagagaagatgctgaaaccg
gcgctggaaaactccagcctctccagcaacgccacaaaggaagcggaaaggagagcacac
gctgtggcaaaggaatccaaagccattctgacccaggccaagcacaccaggactgcgtct
gctcacctcgactcccacatagactctgctttaaaacagctggctgagcaggagacgcta
gcagacacactcagctcgcagatcacctcagagcctgaggcgtccctggccggcgttatg
gaggacatggaagcagccaagctccagttaaaggcctattccgctacactgaccgagcta
atcagcagcatcgatgggaacgtgccgctggagcgcttccaccgccttctggatgagacg
gcgcggcgcctgagcgtgctgcgcggcagcgtcgacagcccggcgctggtgtccaagatc
cagaggctgcagtcggccgccaaggagcagcacagcaggatgtccttcatcgagcaggac
ctgcaggagatcagggaggagagagacagtctcagggacatcgctttaaacctgccccag
tcgtgcccccgggccacgggggcagcgggaggctag

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