Gasterosteus aculeatus (three-spined stickleback): 120832001
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Entry
120832001 CDS
T07457
Symbol
arhgef28a
Name
(RefSeq) LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 28
KO
K21072
A-kinase anchor protein 28
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120832001 (arhgef28a)
Membrane trafficking [BR:
gat04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
120832001 (arhgef28a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_16
PH
C1_1
Ank_2
SOS1_NGEF_PH
PH_13
PHD
Prok-RING_1
DUF7588
C1_2
Motif
Other DBs
NCBI-GeneID:
120832001
NCBI-ProteinID:
XP_040053934
LinkDB
All DBs
Position
XIV:2179990..2208143
Genome browser
AA seq
1739 aa
AA seq
DB search
MEGNRTEVPLYGQVEALVSSPADAPDRAEFYVVVRGSALTHVTAAKRGADGRTLCYTVPG
HAPAEAAAVTSYFYAAGRVEPCEGRASLQYLADAAQEAAEHLKANRERLGPRSHLEVLER
FSAAGLERREEEEEDGISGGESGLGKLDEKITQAMANMEYPQQWSEADAQPREAAELQPR
ETLLHLAVRLGLVHLSRFLIHQPRGQRALTAPNQEGHTPLQLAQRDGRHAMFRALAAPPG
PAVGPVPGVWCVWADGSSMVRFCPGTGSLTLTVRQGRRPEPGGRPEDAVGILRERLADDS
VLKLVNVLKGDTEEDESGTEESAPSDEGVGKALRVDAAAPVDHVFEEQLVLSLDDDDDDE
DFPSSSFGAVNGRPVLPAGVQNQPVQQPSVMDAGDPTAPHHQQEEEADPQVGDATGTDGG
PRDAEQPPPAADAAPPALSPADRALARLSRPASSEQAGRRRTRVTSARDLSPSLVALEVD
SEEEEEEEPQSPLSPLWSEAEKKEDESEGSSPSADVACTCSQSASSAKQTGERGIRLRSY
SYSSPRISFRPARPTRDSNPSDPSLDGVPHSVGHSRSLLQALSLPMSLSLLHPGKQRPPM
TPEQPHEKREIRFRQRAQSAEDEGGVELPESLQHLTLSEFLKEIQEEELDKCNVPAKAES
EKYKVARTFSFLKSRMSSTRNKSKGKAKDREAKDRPPDGHRFNAGSCLGPSACVVCDKPA
SGKDVLHCAGCAAIVHKGCKESVPPCLKKLQDKYAVAMVKNRTASLPQNFTVRDGPPPHV
VPVSPSLPAMRDADAQPGPPPGTFPSGDSRLGDGPEAESDAWKVGGRSEEPPATRASSDS
SYGEDAVDACIHSDMSADAADYEAESWSLTVDNRFCRKQDKRAVKRQDVIYELMQTELHH
LQTLHIMAEVFRRGMREEVQLDPEALERVFPCLDQLLLTHHGFFAAMKERRHGSARPHGR
GNYLIRRIGDVLLQQFSGENNEKMKQLYGEFCSRHNEAVNFFKELQQHNKRFQIFIKQQG
NNSLVRRREIPECILLVTQRITKYPVLLERILQYTEEDTVEHADLTKALAQIRGVIAAVD
LSVSEYEQHQRLQDVCGRMENRSAAKLKNGHAFRKQDMMAPGQTLKHQGPLLWKTATGRL
KDVLALLLTDALIFLQEKDQKYSFAAVDQKPPVIALQKLIVREVANEERGMFLISASAAG
PEMYEVHASSKEERNTWMRIIREAVESCPEEEEESTSESEEERRAAEARVQKIHKLQESL
LSQDQRICSSLEEKLQVYAALGALSGRTDTAAAQVEPRLLVQPNSEEPPQGGVLLSAALR
EAETLKATLSPGARSPSSPSPDSDDADSVFPVSPAPPPSDREGSPVTPEAGQGGWTEALG
LRSPSLLHQTHRNGIDSEVAQSVQSLTRLLYSLQATVAIQDSCCEVQRLLLRESGRPSPR
AHRPHLPSMRGNTLQEQEKQRNLEKRKEEVAAAQRLKGRLRQEKERWERECQARESQQGE
QESRLEERERQCHLETERLRRERQELDEQLEEYQQSLERLREGQRNVERERERLENQREL
LQAWRRCRQRSLPNVIPHMVIPLDGRQDPAASRPRGLAGNGSAFVNEAAFADASVNNRHG
KNDPDAHNCLNALLARPGSRRSAGAKTPRGTHGDPRGWVVGTGYLCGAARRLELQDAPAD
LNRAAAYIAGSWSTTSGADSPPALPGARDPRLDLSALVSLETDGGGGGEEAGEETIVYL
NT seq
5220 nt
NT seq
+upstream
nt +downstream
nt
atggaggggaacagaacagaggtgcccctgtatggacaggtggaggccctggtgagctca
ccagccgacgcccccgaccgagcggagttttacgtcgttgtgcgaggctccgccctcacg
cacgtgaccgcggcgaaacgaggagccgacggacggaccctctgctacacggttcctggc
cacgcccccgcggaagccgccgccgtcacgtcctacttctacgcggcggggcgggtggag
ccgtgcgagggccgggcctccctccagtacctggcggacgcggcccaggaggcggcagag
cacctgaaagcgaaccgcgagcggctcggcccccggagccacctggaggtgctggagagg
ttctccgccgcggggttagagcgccgcgaggaggaggaggaggacgggatttcaggtggg
gagtccggtctggggaagctggatgagaagatcacacaagccatggccaacatggaatac
cctcagcagtggagtgaggccgacgctcagcccagagaagccgctgagcttcagcccaga
gaaaccctccttcacctggcggtgcgcctgggtttggtccacctctcgcgcttcttaatc
caccagccccgaggtcaaagggcactgaccgcgcccaaccaggaggggcacacccccctc
cagctggcccagagggacggacggcacgccatgttcagggcgctggcggctcccccgggt
ccagctgtgggccccgttccaggcgtgtggtgcgtgtgggccgacgggtccagcatggtg
aggttttgtcccgggacgggctccctgaccctgacggtgcggcaggggcggcggccggag
cccggaggccgccccgaggacgccgtcgggatcctccgagagcgactggccgacgacagc
gtcctcaaactggtcaatgtgctcaaaggtgatactgaggaagacgagagcggcacagag
gaatctgccccgagcgatgaaggcgttggcaaagcgctccgagtggacgcggcggcgccg
gtggaccatgtatttgaggaacaactggttctttctctggacgacgacgacgacgatgaa
gacttcccgtcctcatcgtttggggcggtgaacgggcgtcccgtgctgcccgccggagtc
cagaaccagccggtccagcagccctcggtgatggacgccggcgacccgaccgccccgcat
caccagcaggaggaagaagctgacccgcaggtcggggacgccaccgggacggacggcggg
ccgcgggacgcggaacagccgccgccggccgccgatgccgcccctcccgcgctctcaccc
gccgaccgggccctcgcccggctgagccgccccgcgtcctccgagcaggccggccgccgg
cggacgcgcgtgacctcagcgcgtgacctcagtcccagcctggtggccctggaggtggac
agcgaggaggaggaggaggaggagccacagtccccgctctccccgctctggtcggaggcg
gagaaaaaggaagacgagagtgaaggctcctcgccctcggcggacgtcgcctgcacttgc
agccaatccgcctcctcggcgaaacagacgggtgagcgtgggattcgactgcgttcgtac
tcctactcctcccccagaatcagcttccgtcccgcccgtccgacccgcgacagcaacccg
tcggacccgagcctcgatggcgtcccccacagtgtcggccacagccgctctctccttcag
gcgctctctctgcctatgtctctgtctctcctccaccctgggaagcagagaccccccatg
acgccagagcagccgcacgaaaagagggagattaggttccgtcagcgagcgcagtccgct
gaggacgagggcggcgtggagctgccagagtccctccaacatctcaccctgtctgagttc
ctcaaagaaatccaagaggaggagctggacaagtgcaacgtccccgccaaggcggagtcg
gagaagtacaaagtcgcccgcaccttcagtttcctgaagagccggatgtccagcacccgc
aacaagagcaaggggaaggccaaggacagagaggccaaggaccggccgccggacggacac
cggtttaacgccggctcctgtttgggccccagcgcgtgcgtcgtgtgcgataaaccggcc
tccgggaaggacgtgctgcactgcgccggctgcgccgcgatcgtccacaagggctgtaaa
gaatccgtcccgccctgtttgaagaagctccaggataaatacgccgttgccatggtgaag
aacaggacggcgtccctcccgcagaatttcacagtgagagacggtccccctccgcacgtc
gtccccgtctccccgtctctgcccgccatgagggacgcggacgcccagccgggcccgccc
cccgggaccttcccaagcggcgacagtcggctcggcgacggtccggaggccgagtccgac
gcctggaaggtcggcgggcgatcggaagagcccccggcgactcgggcgtcctccgactcg
tcctacggggaagacgccgtcgacgcgtgcatccacagcgacatgtcggccgacgccgcg
gactacgaggccgagtcgtggagtctcaccgtggacaacaggttctgcaggaagcaggac
aagcgagccgtgaagaggcaggacgtgatctacgagctgatgcagaccgagctgcaccac
ctgcagacgctccacatcatggccgaggtcttccggcggggcatgagggaggaggtgcag
ctggatccggaggcgctggagcgggtcttcccctgcctggaccagctgctcctcacccac
cacggcttcttcgccgccatgaaggagcgccggcacggctcggctcggccgcacggacgc
ggcaactacctcatccggcggataggagacgtcctgctccagcagttttcaggtgagaac
aacgagaaaatgaagcagttgtacggagaattctgcagtcgtcacaacgaggcggtgaac
ttcttcaaggagctgcagcagcataacaagagatttcagatcttcatcaagcaacaaggt
aataactccttggtgagacggagggagatcccagagtgcatcttgctggtgacccaaagg
atcacaaagtacccagtgctgctggagaggatcttacagtacactgaagaggacacggtg
gagcacgccgacctcaccaaagcgctggctcagatccggggggtgatagcggccgtggac
ctgagcgtcagcgagtacgagcagcaccagaggttgcaggacgtgtgcggccgcatggag
aaccgcagcgcggccaagctgaagaacggccacgccttccgcaagcaggacatgatggcg
ccggggcagacgctcaaacaccagggccccctcctgtggaagaccgccaccggccggctc
aaagacgtcctggcgctccttctcaccgacgcgctcatcttcctgcaggaaaaagaccag
aagtattcgtttgccgcagtggaccagaagcctcccgtcatcgcgctgcagaagctaata
gtgcgagaagttgcgaacgaagagcgagggatgttcctgatcagcgcgtcggccgccggg
ccggaaatgtacgaggtccacgcgtcctccaaagaggagcgcaacacctggatgaggatc
atcagagaggctgtcgagagctgcccggaggaagaggaagaatccacgagtgaatccgaa
gaggagcggcgagctgccgaggctcgcgttcagaagatccacaagctacaagagagtctg
ctgagccaggaccagcgcatctgctccagcctggaggagaagctgcaggtctacgcggcg
ctcggcgctctgagtgggaggacggacacggcggcggcgcaggtcgaaccgcggctgctc
gtccagccgaactccgaggagccgccccagggcggcgtcctgctttctgccgctctgcga
gaggccgagaccctgaaggccacgctgtcgcctggggcccgctctccatcgagtcccagc
ccggactccgacgacgccgactccgtgttccccgtcagcccggcgccgcccccctcggac
cgcgagggctcgcctgtaaccccggaggccgggcaggggggctggactgaggccctcggg
ctccgctccccttctctcctgcaccaaacccacaggaacggcatcgactccgaggttgct
caaagtgtccaaagcctgacccggttactctacagtctgcaggccaccgtcgccatccag
gacagctgctgcgaggtccagaggctcctcctccgagagagcggccgcccatccccccgc
gcccaccggccgcacctccccagcatgcggggcaacaccctgcaggagcaggagaagcag
cgcaacctggagaagcgcaaggaggaggtggcggcggcgcagcggctcaagggccgcctc
cgccaggagaaggagcgctgggagcgcgagtgccaggcccgggagagccagcagggggag
caggagagcaggctggaggagcgggagcggcagtgccacctggagacggagaggctgagg
cgagagcgccaggagctggacgagcagctggaggagtaccagcagagcctggagcggctc
cgggagggccagaggaacgtggagagggagcgcgagcgcctggagaaccagcgggagctg
ctccaggcgtggcggcgctgccggcagaggagtctgcccaacgtgattccgcacatggtc
atccctctagatgggcgtcaggacccggcggcgagtcggccccgaggcctcgccggcaac
ggctccgcgttcgtgaacgaggcggcgttcgccgacgccagcgtcaacaaccgccacggc
aagaacgaccccgacgcgcacaactgcctcaacgccctgctggcgagacccggcagcaga
cgcagcgccggcgcgaagaccccccgcggcacgcacggcgacccccggggctgggtggtg
gggacggggtacctctgcggcgccgcgcggcggctggagctgcaggacgcgcccgccgat
cttaaccgtgccgccgcctacatcgcggggagctggtcgacgacaagcggcgccgactcg
cctcccgcgctgcccggtgcccgtgacccccgcctggacctcagcgcgctggtttccttg
gagacggacggcggcggcggcggggaggaggccggcgaggagaccattgtgtacctctga
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integrated database retrieval system
