Gasterosteus aculeatus (three-spined stickleback): 120832009
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Entry
120832009 CDS
T07457
Name
(RefSeq) nucleolysin TIA-1-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gat03019
]
120832009
03041 Spliceosome [BR:
gat03041
]
120832009
Messenger RNA biogenesis [BR:
gat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
120832009
Spliceosome [BR:
gat03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120832009
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
Calcipressin
Nup35_RRM_2
RRM_3
Motif
Other DBs
NCBI-GeneID:
120832009
NCBI-ProteinID:
XP_040053944
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All DBs
Position
XIV:1500388..1508327
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AA seq
388 aa
AA seq
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MDDDQPKTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYCFVEFYEYRHAT
ATIAAMNGRKILGKEVKVNWATTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFAPFGK
ISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTT
NETPNTKQLSFDEVVNQSSPSNCTVYCGGVTTGLTEQIMRQTFSPFGQIMEIRVFPDKGY
SFVRFNSHEAAAHAIVSVNGTSIEGYVVKCYWGKETTDMVSPIQQVQMPQQSTVSFAAAQ
PYSQWGQWYSNTAAQQLGQYVPNGWQVPSYGVYGQTWDQQGYNHLHAGAGWTGVGAVSNG
AMVEPGQGVNGAVLTNTAGMSAAGYHTH
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggacgatgaccagcccaaaaccctgtacgtggggaacctgtcccgggacgtgacagag
gccctcatcttggagttgtttggccagattggaccctgcaagagctgtaaaatgatagta
gatacggcgggtcatgatccgtactgctttgtggagttctatgagtatagacatgccact
gccacaatcgcggccatgaacggtcggaaaatactgggtaaggaggtcaaggtcaactgg
gccacgacgccaaccagccaaaagaaagacacaagtagtcacttccacgtctttgttgga
gatttaagtcctgaaatcaccacagacgacataaaagcagctttcgctccgtttgggaaa
atatcggattgtcgagtggtgaaagacatggccacaggtaaatctaaaggctatggcttt
gtctccttcttcaacaaatgggatgcggagaacgccatacagcagatgggaggacagtgg
ctgggcgggaggcagatcagaaccaactgggccacgaggaagccggcgcctaaaactaca
aacgagacacccaacactaagcagctatccttcgacgaggtggtcaaccagtccagcccc
agcaactgcaccgtgtactgcgggggggtcaccaccggcctcacggagcaaatcatgaga
cagactttctcacctttcggccaaataatggaaatccgtgttttcccggacaaaggctac
tcgtttgtgaggttcaactcccacgaggcggcagctcacgccatcgtgtcggtcaacggc
acgtccattgagggctacgtggtcaagtgttactggggcaaagaaaccaccgacatggtc
agccccatccagcaggtacagatgccacagcagagcacggtgagcttcgcggcggcgcag
ccctacagccagtggggtcagtggtacagcaacacggccgcccagcagctcgggcagtac
gtgcccaacggatggcaggtgccaagctacggcgtctacgggcagacctgggatcagcag
ggctacaatcatttacatgccggggccggatggaccggcgtgggggccgtgagcaacggg
gccatggtggagcccggccagggagtcaacggggccgtgctcaccaacacggccggcatg
agcgccgccggctaccacacccactga
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