Gasterosteus aculeatus (three-spined stickleback): 120832022
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Entry
120832022 CDS
T07457
Symbol
dcp2
Name
(RefSeq) m7GpppN-mRNA hydrolase
KO
K12613
mRNA-decapping enzyme subunit 2 [EC:
3.6.1.62
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120832022 (dcp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gat03019
]
120832022 (dcp2)
Enzymes [BR:
gat01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.62 5'-(N7-methylguanosine 5'-triphospho)-[mRNA] hydrolase
120832022 (dcp2)
Messenger RNA biogenesis [BR:
gat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120832022 (dcp2)
mRNA degradation factors
5'-3' decay
Decapping complex
120832022 (dcp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP2
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-GeneID:
120832022
NCBI-ProteinID:
XP_040053966
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Position
XIV:complement(14033812..14043642)
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AA seq
390 aa
AA seq
DB search
MLCTNMENKRVEIPSGVLDDLCSRFILHIPSEERDNAIRVCFQIELAHWFYLDFCMQNTP
GAPHCGIRDFAKAIFHHCPFLLPHGEDVQKILEQWKEYKMGVPTFGAIILDEALENALLV
QGYLAKSGWGFPKGKVNEDEAPHDCAVREVLEETGFDIKNRISKDRYIEQKITDQLVRLY
IIPGVSKDTKFNPKTRKEIRNIEWFPIEKLPCHRNDMTPKSKLGLAPNRFFMAIPFIRPL
REWISRLKGESTDSDEDFANIGVTPGKASDNTRHKLRRLTGTEAYPGEGGAKPKQQKALE
QLNQHELNQNTNLKPSGKKCQDSSYGANNQQKEDKRLQPRRLQDSFERDVGPCTSNGHQA
AHSRDSEDLLFSKAFLNFKFDKDAIMKCFE
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgctttgtaccaacatggaaaacaaacgagtggagatcccctccggcgtactggacgac
ctttgcagccggttcatcctgcacatccccagtgaggagagggacaacgccatccgggtg
tgcttccagatcgagctggcccactggttctacctggacttctgcatgcagaacacccca
ggagcccctcactgtggaataagagactttgccaaagcaatcttccaccactgtccattt
ctattgcctcatggagaggatgttcaaaagatccttgaacagtggaaggagtacaagatg
ggcgttcctacctttggagcaatcattctagatgaagcactggaaaacgcactgcttgtt
caaggctaccttgcaaagtccggctggggctttccaaaggggaaagttaacgaggatgaa
gctcctcatgactgtgcagtccgtgaagtgttggaggagacgggttttgacatcaagaat
cgaatctctaaagaccggtacatagagcagaaaatcactgaccagctggtgcggctctac
atcataccgggagtgtcaaaggatactaagttcaatccaaaaacaaggaaagagatcagg
aacattgaatggtttccaattgagaagctgccctgtcataggaatgacatgaccccaaag
tctaaactcggactcgcccccaacaggtttttcatggccattccgtttataaggccgctg
cgagaatggatcagccggctgaaaggcgagtccacagacagcgacgaggactttgcaaac
attggcgtcactccaggaaaagcttcagacaacactcggcataaattgcgccgcctcaca
ggtacggaagcctatccaggagagggcggggccaaaccgaagcagcagaaggctctggag
cagctcaaccagcatgagctcaaccagaacacaaatttgaaacccagtgggaagaaatgt
caggactcatcttatggagcaaacaaccaacagaaagaagataaacgactacaacccaga
agactgcaagacagttttgagagagatgtgggtccatgcacctcaaacggccaccaggcc
gcccacagcagagactccgaggacctgctcttctccaaggctttcctaaatttcaaattt
gacaaagatgccatcatgaaatgttttgagtaa
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