Gasterosteus aculeatus (three-spined stickleback): 120832153
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Entry
120832153 CDS
T07457
Symbol
nudt21
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120832153 (nudt21)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gat03019
]
120832153 (nudt21)
Messenger RNA biogenesis [BR:
gat03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
120832153 (nudt21)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
120832153
NCBI-ProteinID:
XP_040054161
LinkDB
All DBs
Position
2:12022728..12024999
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AA seq
234 aa
AA seq
DB search
MSVAPPSRSAAGWPRGGAVQFGNKYISGPAKALSLERTINLYPLTNYTFGTKEPLYEKDS
SVAARFQRMREEFDKMGMRRTVEGVLIVHEHRLPHVLLLQLGTTFFKLPGGELSPGEDEV
EGLKRLMTEILGRQDGVKQDWVIDDCIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQ
LQEKALFAVPKNYKLVAAPLFELYDNAPGYGPIISSLPQLLSRYSLCHCGTSLN
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtcgcgcctcccagccgctcggccgccggctggccgcgcggcggagccgttcag
tttgggaacaaatacatcagcgggcccgcgaaggcgctttccctggagaggaccatcaac
ctgtaccctctaaccaactacacctttggaaccaaggagcctctgtacgagaaggacagc
tctgtggctgcccgcttccagcggatgcgtgaagagtttgataaaatgggaatgcggagg
acagtggagggtgttctcattgtccatgaacaccggctgcctcacgtgttactgctgcag
ctgggcaccactttcttcaaactgcccggtggagagttgagtcctggagaagatgaggtg
gagggtctgaaacgcctgatgaccgagatccttggaaggcaagatggcgtgaagcaagac
tgggtgattgacgactgtatcggcaattggtggcgcccgaactttgagcctccacagtat
ccgtatattccagctcacatcactaaacccaaggagcataagaagctattcctggttcag
ttgcaggaaaaagcgctgtttgccgtccccaagaactataaactggtggcagcacctttg
tttgaactgtatgacaacgctcctggatatggaccaatcatttccagtcttccgcagctt
ttgagcaggtatagtttatgtcattgtggaacgagcctgaattga
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