Gasterosteus aculeatus (three-spined stickleback): 120832159
Help
Entry
120832159 CDS
T07457
Symbol
loxhd1a
Name
(RefSeq) LOW QUALITY PROTEIN: lipoxygenase homology domain-containing protein 1
KO
K24822
lipoxygenase homology domain-containing protein 1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gat03037
]
120832159 (loxhd1a)
04990 Domain-containing proteins not elsewhere classified [BR:
gat04990
]
120832159 (loxhd1a)
Cilium and associated proteins [BR:
gat03037
]
Other cilia and associated proteins
Stereociliary proteins
120832159 (loxhd1a)
Domain-containing proteins not elsewhere classified [BR:
gat04990
]
Other domain-containing proteins
Others
120832159 (loxhd1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLAT
ATS3
DUF7755
Annexin
Motif
Other DBs
NCBI-GeneID:
120832159
NCBI-ProteinID:
XP_040054164
LinkDB
All DBs
Position
XIV:3576272..3598768
Genome browser
AA seq
2422 aa
AA seq
DB search
MPSKQKKSTAAEETEEVGDEVEETELKIKESGDDGDGVTHGDAAKGEKSREKHKCAESSE
DPEAPGREKKKKKTREKKKKKAPDDAAVIENEEEEGEQNNNDPKNNSKKEKSGKLKEEVT
EVEKDKQKKKKKKTQSSTENPEGEEEMGSKDKKSKDGKKKKKSDGDEEPLIEEQEEEEDS
KKKKKKKAKKGSADSDEDKKKKGKKSKNKQVDYGVIYQNELLNYNTDSSDGYEDEYYKKK
VYEVVTITGDVKGAGTDANVFVTLFGDYGVTPKVHLASKSRTAFEKNKTDVFRIKTHNVG
PLRKLRIEHDNTGMNASWFLDRVVVTDMNRPHLRFYFACNNWLSREEADNLFVRDLLGCM
NPMDVPKLNKYIVSVFTADMKGSGTDADVFLNIFGENGDTGERRLDSDKDNFERGSEDKF
TIEAPNLGRLRKITIGHNNRGSSAGWFLDKVTVDDMGNKEVYDFPVSRWFAMDECDGKIQ
RDVLVGSVQPMGIVYNVQVMTGDVRGGGTNSKIHIVMHGSKGLRNSGKVFLEGGAFERGL
IDIFNAEICELLSPLSRVTIGHDNGAVGAGWYCEKVVIYCPFTGIEQTFPCGKWLDEDEA
DGLIERELYEMVSLRQKKQKKFPWSLWILTSDVKGAGTDAQVFLQIYGEKGKSDEIKLEN
NSDSFEQGQLDKFMVEMPDIGRLLKVRIWHEKRHPFAGWHLAKITLLKTLTMEKYSFECG
RWLDINEDDNEIVRELPATGSLINEPLPLIKYRVTICTGNVSGSGTDASVFLNVIGDLGD
TGERLMFMSKNNVNKFEKGNHDEFLIESVSLGQVRRVRVGHDGRGGGCGWFLDKVMVRED
GQPESLATEFPCFRWLDRNEDDGQIVRELVPAGDGLRLFNVSYHIAIKTGSVSGASSDSR
VFVKLYGEKGDTNKTILAVSDNDLRNYFETGQTDIFTIDTFDIGQINRFLIGHMNEGLRA
GWFLDSVQISVPVHGKQYMFPSHRWLCKDEADGKVEVEIYPSEILDIEQLINYEVTVVTG
DVRAGGTNANVFCQIYGDEGKTEVLVLKSRSNNFERGTTEIFRIEALDVGKIYKMRIYHD
GKGIGDGLVSWRRWDIKRLTMAMVQVEVKKQDAKKDKKKDKKKKKKEEEEEVEIVERLQE
VVEAFAFPCDRWLARDEEDGEIVVELLTEGNEDLEVNSYEVHVFTGTMWGAGTDANVYVN
IYGEIGDTGERQLRKANNLNKFEKGQEDIFDITAVDLGTLKKLRIRHDNSQASAGWFLDR
VEIVDNKDDTTYFFPCKRWLAVDEDDGQLARELVPVDEAFMKKGDDDDEEDSETTLGLEQ
KAMSTTYTMRIKTGDKKYAGTDANVFMIMYGTKDDTGTIKLEASKTHKNKFERGMVDEFT
VEAVDIGPLKKLRVGHDNCGGGSAGWFLDWVEIDAPSLGRKLHFPCGRWLDKGEDDGAIV
RDLFPNSLQTELYTPFVPYEIKTFTSDVFAAGTDADVFIVLYGRDAVCTQQKSLCVNKRE
RRMYFERGAEDMFIVELEDVGDVIEKIRIGHDNRGVNPGWHLDRVEIRRLLRKGKGSETV
IFPCECWLAKSEDDGETVRELVPSDIITEKLSRDGNLKVTEVEVEDALETHTYTVSVTTG
DVYGAGTDANVFLTIYGDQGDTGERKLRKSETNSNKFERGSVDKFTIEAVDLGQVFRIKM
RHDNSMMSADWYLDQVEVFDVDTEEVYLFLCERWLSRKREDRRIERVFYVKGYEGVRESS
KKKNTAVTVKSVDNNMNKKSKKKKEEEEEEEVELPIIPYHITICTGLERDASTTSRAYVI
IIGANHTQTQRLWLDLPGERKGFEAGSLESFQCHGSDVGEIKKVELGHDGATPESCWLVD
ELSVAVPTKGVKYIFACKCWLAKDRGDGLTARVFSVLDAEAISISQQIIYEVTVVTGDVQ
DAGTDTLIFMSVFGANGSTEEMLLQKNEDRFERGQEDTFNMEIDDVAPLRKMRLRIDGSG
SRPDWFLDQVVLRNLATEEVSVFTYEEWLSRTRGPKRTTMCEMAAVVDEELMVELTTYIV
QVKTSDSSGAGTDANVWIIVFGENGDTGELALKESQRSNKFERKQVDTFRFTDILSMGEL
SKVRVWHDNSGPAAGWHLEYIDVKDEILDKTFRFPCDRWLAKNVDDGQIMRELACANNDY
LDLGEKTKYEICVTTGDTETKESAWIALEGRKGRSKEFAMENSSKKKRFLRGNVDRFEFS
SKNLGDIAGICLGHTPKDGKKVKGEVFWRVEEVVVTERELGNKYIFSCNALIPLSPKRED
FSTFECTKAIESFASKARSLVPVKYEIIVITGDEKGAGTDANVFITIYGSNGDSGRRQLR
QKFRNLFEREQTDRFLLEMLDMGELQKVRVEHDNSGLSPGWLLDRVEVTNTANGVTTIFL
CGKWLDTKKADGVIARVFYPKY
NT seq
7269 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcgaaacagaaaaaatccacggctgctgaagaaaccgaagaggtcggtgacgaa
gtggaggagacggagctaaaaataaaggagagcggcgacgacggcgacggcgtgacccac
ggggacgccgcgaaaggagagaagagtcgtgagaaacacaagtgcgccgagagctccgag
gatccggaggccccggggagagagaagaagaagaagaagacgagagaaaagaagaagaaa
aaggccccagatgatgcggctgtgattgaaaatgaggaggaggaaggtgagcaaaacaat
aatgaccccaagaacaattcaaagaaggagaaatcagggaagctcaaagaggaagtgaca
gaggtagagaaagacaaacagaagaagaagaagaagaagacacaatcctccacagagaat
ccagagggggaagaagagatgggatccaaggacaagaagtcgaaagacggcaaaaagaag
aaaaagtccgacggcgatgaggagcccttgattgaggagcaggaggaagaggaggactcc
aagaaaaagaagaagaagaaggcgaagaaggggtcggcggacagcgacgaagacaagaag
aaaaaggggaagaaatccaaaaataaacaggtggactacggcgtcatctaccagaacgag
ctgctgaactacaacacagattcatcagacggatacgaggatgagtactacaaaaagaaa
gtgtatgaggtggtcactatcactggtgatgtaaagggagccgggacggatgctaatgtg
tttgttaccctttttggggactatggcgtcacgcccaaggttcacttggcaagcaagagc
cgaactgcatttgagaagaataagactgatgttttccgtatcaaaacgcacaacgtgggg
cctctgaggaagctgaggatcgagcacgacaacacggggatgaacgccagctggttcctg
gaccgggtggtggtgaccgacatgaaccggccacatctgcgcttctatttcgcctgcaac
aactggctcagtcgagaggaggccgacaacctgtttgtccgggacctgctgggctgcatg
aaccccatggacgtccccaagttaaataagtacatagtgagcgtgttcactgcggacatg
aagggaagtgggaccgatgcggatgtcttcctgaacatatttggggagaatggtgacaca
ggagagcggcggctggacagcgacaaagacaactttgagcgcgggtcagaggacaagttt
acgatagaggcgccaaacctgggcaggctgaggaaaatcactattggccacaataacaga
ggttcatcagctggatggtttctagacaaggtaacggttgacgacatggggaataaggaa
gtctatgacttccctgttagtcgttggttcgccatggatgaatgcgatggcaagatacag
agagatgtgttggttggatccgtgcaaccgatgggaatcgtgtacaatgtgcaagtgatg
acgggagacgtgaggggtggaggcaccaactctaagatccacatcgtcatgcacggctcc
aagggcttaaggaacagtggcaaagttttcctggaggggggcgccttcgagcgcggcctc
attgacattttcaacgcagagatctgtgaactgctcagcccgctcagcagggtcaccatc
ggccacgacaatggggctgttggcgccggatggtactgtgaaaaggttgtgatatactgt
ccattcacgggcatcgagcagacattcccgtgcgggaagtggctggacgaggacgaggcg
gacggactgattgagagggagctgtacgagatggtctctctcaggcagaagaaacagaag
aagttcccatggtccctgtggatcttgacatcggatgtgaagggcgcggggacggacgcc
caggtgtttttgcagatctatggagagaagggcaagtctgatgagatcaaactggaaaac
aactctgacagctttgaacagggccagctggataaattcatggttgaaatgccagacata
gggagactgctgaaagtgcgcatctggcacgagaagagacatccgtttgctggatggcat
ctagcgaagatcactttgctcaagacactgacaatggaaaagtattcttttgaatgtggc
cgttggctggacatcaacgaggacgacaatgagatcgtcagagaacttccagctacgggg
tcactcatcaatgagccgctgcctctgataaagtaccgtgttaccatctgcaccggcaac
gtcagtggcagtggcaccgacgcgagcgtcttccttaatgtcatcggtgacctgggcgac
acgggggagagactcatgtttatgagcaagaacaacgtcaacaaatttgaaaagggcaac
cacgacgagtttctcatcgagtcggtgtctttgggccaagtgcgcagggtgcgcgtcggc
cacgacggccgcggcggaggctgcggttggttccttgacaaggtgatggtccgggaagat
ggccagcctgagagtttggccaccgagttcccctgtttcaggtggttggaccgtaatgag
gatgatggacagattgtccgtgagttagtcccagctggagatggcctgcgcctcttcaat
gtcagctaccacatagcaataaagacgggcagcgtgagcggagccagctcggactccagg
gtgtttgtcaagctgtacggagagaagggcgacaccaacaagacgatactggctgtttcc
gacaacgacctcaggaactactttgagacgggacaaacggacatcttcaccattgacacc
tttgacatcggacagatcaaccgcttcctgattggtcacatgaacgagggcctgcgggcc
ggctggtttctggacagcgtccagatctccgtgccggttcatgggaagcagtacatgttc
cccagccaccgctggctctgcaaagacgaggctgatgggaaagtggaggtggagatttat
cccagtgagatattggacatcgaacaattgatcaactatgaagtaacagtggtcacaggg
gacgtgcgagcaggtggcaccaatgccaacgtcttctgtcagatttacggagacgaagga
aaaactgaagtcctcgtgctcaagagtcgttccaacaattttgaacgcggcaccacggag
atcttcaggattgaggctctggatgttggtaaaatctacaagatgcgaatctaccacgac
gggaagggcatcggagacgggctggtttcttggagaaggtgggacatcaagcggctgacg
atggcgatggtgcaggtcgaggtgaagaagcaggacgccaagaaagacaagaagaaggac
aagaagaagaagaagaaagaggaggaggaggaggtggagatagttgagcggctgcaggaa
gtggtggaggcgttcgccttcccgtgtgaccgctggctggccagggatgaggaggacggg
gagatcgtggtggagctgctgaccgagggcaatgaagacctggaggtgaactcatacgag
gtccacgtgttcaccgggacgatgtggggggctgggacggatgccaatgtttacgtcaac
atttatggagagatcggcgacacgggggagcgccagctcaggaaggcaaacaacctgaac
aaatttgagaaaggccaggaggacattttcgacatcacggcggtggacttggggaccctg
aagaagctgcggatccgacatgacaacagccaggccagtgccggctggttcttggacaga
gtggaaattgtggacaacaaagatgacaccacgtactttttcccctgtaaacgctggctg
gctgtcgatgaggatgacggacagctggccagggagctagttcctgtggacgaggccttt
atgaagaaaggagatgatgatgatgaggaagactctgaaaccacgcttggccttgaacag
aaggccatgtcgacaacttacacgatgaggataaaaactggcgacaaaaagtatgcagga
actgatgctaacgtctttatgataatgtacggtaccaaggacgacacagggacaattaag
ctggaggcgtcaaagactcataagaacaagtttgagcggggcatggtcgatgagttcacc
gtggaagctgtggacatcgggccgctgaagaagctgcgcgttggacacgacaactgtggt
ggaggatcagcaggctggttcctcgactgggtggagatcgacgccccgtctctcggtcgg
aaactgcacttcccctgcggccgctggttggacaaaggggaggacgacggggccatcgtc
agggaccttttccctaattccctccagacggagctttacacgccattcgtcccatatgaa
atcaagaccttcaccagcgacgtgttcgccgccggcacggacgcagacgtcttcattgtc
ctctacgggagggacgcagtgtgcacccagcagaagtctctgtgcgtcaacaagagggag
aggaggatgtactttgagagaggagctgaagacatgtttattgtcgagctagaagatgtg
ggggatgtaattgaaaagatccggatcggccatgacaaccggggggtcaacccgggctgg
cacctggaccgagtggagatcagacgtctgctccggaagggaaagggctcggagaccgtc
atcttcccgtgcgaatgttggctcgccaagtcggaggacgacggagaaaccgtgcgagag
ctggtgccctcggacatcatcaccgagaagctctcccgagacgggaacctgaaagtcacc
gaggtggaggtggaagatgccctggagactcacacatacacagtgtcggtgacgacgggc
gacgtgtacggagccggcaccgacgccaacgtcttcctcaccatttacggggaccagggg
gacactggggagaggaaactccgcaagtcggagacaaacagcaacaagtttgaacgggga
tctgtggataagttcactatagaagccgttgacctcggacaggttttcaggatcaaaatg
cgccacgacaacagcatgatgagtgccgactggtacttggaccaggtggaggtgttcgac
gtggacacagaagaggtgtatctcttcttatgtgagcgttggctgtccaggaagagggag
gaccgacgcattgagagagtcttctatgtcaagggctacgaaggtgttagagaaagcagt
aaaaagaagaacacagctgtgacagtgaagagcgtcgacaataacatgaacaaaaagagc
aagaagaagaaggaggaggaggaggaggaggaagttgagcttcccatcattccataccac
atcaccatctgcaccggactggagcgggacgcgagcaccaccagcagggcttatgtgatc
atcatcggggccaatcacacccagacacagaggttgtggctggacctgccgggcgagagg
aagggctttgaggccggctccctggagagctttcagtgccacggctcagacgtgggggag
atcaaaaaagtcgagctaggtcatgacggggccactcctgagagctgctggctggttgat
gagctgtctgttgctgtgccaaccaaaggggtcaaatatatctttgcttgcaagtgctgg
ctggccaaagatcgaggagatggtctgactgctcgagtgttcagcgtgctggatgcagag
gccatttccatctcccagcagattatttacgaggttaccgtagtaacgggggacgtgcag
gacgcaggaacagacaccctgatcttcatgtctgtattcggagccaacggcagcacggag
gagatgctgctgcagaagaatgaggacaggttcgagcgcggtcaggaggacactttcaac
atggagatcgatgacgtcgctccactgaggaaaatgaggcttcgcatcgatggctccggc
agtcgacccgactggttcctggatcaggtggtcctgcgtaacctggccacagaggaggtg
tccgtgttcacctatgaggagtggctctccaggacccgtggaccgaagaggaccaccatg
tgcgagatggctgctgtggtggacgaggagctgatggtggagctcaccacttacatcgtc
caggtcaagaccagtgacagttcaggggcgggcaccgacgccaacgtgtggatcattgtt
ttcggagagaacggagacacaggagagctcgctttgaaagagtcccagaggtccaacaag
tttgagcgcaagcaggtggacacgttccgcttcacggatatcctcagcatgggagagctc
tccaaagtccgggtctggcacgacaactcaggtcccgctgcaggatggcacctggaatac
atcgacgtgaaggatgagatcctggacaaaacgtttcgtttcccctgcgaccgctggctc
gccaagaacgtcgacgacggacagataatgagagagctggcatgcgccaacaacgactac
ttggacctcggcgagaagacgaagtatgaaatttgtgtcacaactggagacacggaaacc
aaagaaagtgcctggattgcactcgaggggaggaaaggccgatcaaaagaatttgcaatg
gagaactcctccaagaagaagcggttcttgcggggaaatgttgacaggttcgagttctcg
tccaagaacttgggggacatcgctggcatctgcctgggacacacacccaaggatggaaag
aaagtgaagggggaggtattctggcgcgtggaggaggtggttgtcactgaaagggagctg
ggaaacaagtacatcttcagctgcaatgccctcatccctctctccccgaagagggaggat
ttctccaccttcgagtgcacgaaggccatcgagagcttcgccagcaaagctcgaagcctc
gtgcccgtcaagtacgaaatcatcgtcatcacgggcgacgagaagggggcgggcacggac
gccaacgtcttcatcaccatctacggctccaacggagattcgggccgccggcagctgcgg
cagaagttccggaaccttttcgaacgggagcagacggaccggttcctgctggagatgctg
gacatgggcgagctgcagaaggtccgggtggagcacgacaactccggcctgagccccggc
tggctgctggaccgcgtggaggtcaccaacaccgccaacggggtcaccaccatcttcctg
tgcgggaagtggctggacaccaagaaggccgacggggtgatcgcaagagtcttctaccca
aaatactag
DBGET
integrated database retrieval system
