Gasterosteus aculeatus (three-spined stickleback): 120832168
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Entry
120832168 CDS
T07457
Symbol
ttc28
Name
(RefSeq) LOW QUALITY PROTEIN: tetratricopeptide repeat protein 28
KO
K24936
tetratricopeptide repeat protein 28
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gat03037
]
120832168 (ttc28)
Cilium and associated proteins [BR:
gat03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
120832168 (ttc28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TTC28_C
TPR_10
TPR_8
TPR_2
TPR_MalT
Rapsyn_N
RPN7
TPR_NPHP3
TPR_16
TPR_17
TPR_6
TPR_14
TPR_19
TPR_9
Motif
Other DBs
NCBI-GeneID:
120832168
NCBI-ProteinID:
XP_040054171
LinkDB
All DBs
Position
14:complement(729971..>749163)
Genome browser
AA seq
2329 aa
AA seq
DB search
TPNLFLLPQAYFRQGVALQYLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPLGES
LEPTYQQLRRMKLDKSPFVVVSVVGQELLTHGFHAASVVVLEAGLKIGTCSLKLRGSVFS
ALSSAYWALGNVEKSVFYMQQDLEVTKTLGDQTGECRAHGNLGSALFSKGSFREALANHR
NQLVLAMKLKDREAASGALSSLGHVYTAIGDFPNALASHKQCALLARQTGSRLHEARQLG
NVGAVYTALGDFSNAVRSHEQHLDIAKSLENRREEARAYSNLGSAFHSQRDFDKAVSYHG
RVLQLGQQLGDRAIEMRAYAGLGHAARCMQDLERARVHHQHQLEIAEELQDRAAQGRASS
NLGIIHQMKGEYETALKLHQAHLSLAQELSDYAAQGRAYGNMGNAHHALGVYDQAVRFHR
QELQISVEVNDRPSQASTHGNLAVAYQALGAHEQALQHYLHHLAIARELRDAQSEARALA
NLGNFHSWRGEYAQALPYYGQYLALAPGLQDLEGEGKVCHNLGYAHYCLGQYGDAVRYYE
QDLALAKDLQDKLSQAKAYCNLGLAHKALGEHKKAEECQRYLLSLAQALDNTQAVFRAFG
NLGDVCACRGDLPAALRFYQQQLSLAQKVSDQRMEADAYSALGSVHRLLRQLDAALSFHS
QELTVRKDLADQQGECRALGHLAAVHMALGDYATTFQCYRAQLGLAQGLRDAGLEAQVHG
NMGITKMNMGVFEEAIGYFEQQLAMLQQLSGTESVLDRGRAYGNLADCYDALGDHEEAIQ
YYEKYLAVAQSLDHVQDQEKAYRGLGNAHRSMGSLQQALVCFEKRLVVAHELGGEAGGKA
QAYGELGTLHSQLGNYEQSLSCLEHQLSIARAAGDKPLEAEASDALGGVYQLMADNETAL
QWHQRALDIGEQTGCVRSQGRAYGNLGLTYEALGKYERAVVFQEQHLSVAAQTSDLIGKT
LAYGSLGRTHHALQNYAQAVMYLQEGLRLSEQLGRREDEAKIRHRLGLSLWAGGNLEEAQ
HQLHRSSVLFEAIRRETQHSTDCKLSLFDLQTSSYQALQSVLVSLGRHDEALATAERGRT
RAFADLLVERQKGGGPAATSDPYGPVTVEHILETVNGQRALVLYYSLAGGFLYSWLISPG
TGIVKFNEVYLGESGLEEFHDAGGGSPQGGGGGGGPLSLDQYIGNAREALGVDSHHSRRC
SGSETESEAGDLLELNHDPTGYLRMVSRNNLFNRSCQSMTSLYSSTVSPAKDVPSSPPRR
PSALSRAPPLRALYDLLIAPMEGALMHSSGPVGRHRQLVLVLEGELYLVPFALLKGSSSN
EYLYERFSLISVPSLGSLGAAIKPPSRRGGPALCSDGGSVAAVVGAPRLPPSVMDRWLWG
PLPSAQDEALWLGEQLGCRPLAGAGATKERVLAALGPAECVHFATHVSWKLAALVLAPGR
EHGAGEGPAAAGRPRERSPRGGSASSLGRAEETSXDGESAYYSPPLHDFLLTAADIRDLS
LSVKLVVLRVYPESSSRATADGVVGLTPAFLGAGVQCVCVSLGPGPVAASKLFTHAFYSG
LLAGTKASAALTDAMKGLQNNKHFSHPSNWAGYMLVGADVKLNSPMSLVAQALAEILQHP
ERARDALRVLLHLVEKSLQRIQSGQSNPMYTSQQSVENKVGGVPGWQALLSAVGFRLDFS
AGGAGPPAAVFFPTSDPGDRLQQCSTTLQALLGLTPPGLQALCKLVTASEAGEQLIHKLH
QVLVQLQAGDREQDFSLAPVQVAISVQLWRLPGCHEFLAALGLDLCEVGQEEVLLKTGKQ
ASRRVVHFALQALLALFESTELPKRLSMDSSSLLESLSSSQSASQPHSLALSFGWYPPQP
SFLPPACPDNLSCDAISVYSLSSLASSLSFLSRPEPAGSDIISQRPHQQEPERPRGGGGL
YASHRHSGGLPRGRPSDPGGGGGGGGEEEYEGYSIISSEPLGRGRRECDTLPLPGGHRSA
RGGARRGSAGGHGCPLTISSKGSISTPTSPIKAPPPPPKAPNGSRAELDTCPPRRTGKGK
ASSSESDQSSTETDSTVKSQEERTVPVGQLDPQELAQKILEETQSHMQAVESLQKAARGA
GSPATGGARGFQPSESSAFSRPPSGAGLKPRSSPLSPPAPPPTRPKPPSRSSSLQMLVVP
APPSPPSSLPEASLRLRPRYPTSPYSGHISPALSCSSGGSVSGPSSPADTPEPDRSKRDH
KIQAVHDLKTFWAGQKHELPSAASLLRGGTGRRMTTVQKDVLGLLHLSPRHEPSSKSAEA
SNSDRPNVRQKTGAKPPPPPPPPKGGVKLPSGNGFKFLSPGHFFPSSKC
NT seq
6990 nt
NT seq
+upstream
nt +downstream
nt
actcccaacctcttcctcctcccgcaggcctacttccgccagggggtcgccctgcagtac
ctgggtcgtcacgccgacgccctggcggcgttcgcctccggcctcgcccaggaccccaag
agcctgcagctgctggtgggcatggtggaggccgccatgaagtcgcccctcggagagtcc
cttgagccgacctaccagcagctgcggaggatgaagctggacaagagcccgttcgtggtg
gtgtccgtcgtcggccaggagctgctgacccacggtttccacgccgcctcggtggtggtg
ctggaggcggggcttaagatcggcacgtgctccctgaagctgcgcggctccgtcttctcg
gcgctgagctccgcctactgggctctgggcaacgtggagaagagcgtcttctacatgcag
caggacctggaggtcaccaagaccttaggggaccagacgggggagtgccgcgctcacggg
aacctcggctccgccctcttctccaaaggcagcttcagagaagcgctcgccaaccacagg
aaccagctggtgctcgccatgaagctcaaggacagggaggcggcgtccggcgccctcagc
agcctgggtcacgtgtacacggccatcggcgacttccccaacgcgctggcgagccacaag
cagtgtgcgctgctggcgcggcagaccggcagccggctgcacgaggcgcggcagctgggc
aacgtgggcgccgtctacacggcgctgggcgacttcagcaacgccgtgcgcagccacgag
cagcacctggacatcgccaagtctctggagaaccggcgcgaggaggcgcgggcctacagc
aacctgggcagcgccttccactcccagcgggacttcgacaaggccgtctcgtaccacggc
cgggtgctgcagctgggccagcagctgggggaccgggccatcgagatgagggcctacgcc
gggctggggcacgccgcccgctgcatgcaggacctggagagagctcgcgtgcaccaccag
caccagctggagatcgcggaggagctgcaggaccgggcggctcagggccgagcgtcctcc
aacctgggcatcatccaccagatgaagggcgagtacgagacggcgctgaagctccaccag
gcgcacctgtccctcgcccaggagctgagcgactacgccgcccagggtcgggcctacggc
aacatgggcaacgcccaccacgccctcggcgtttacgaccaggccgtccgcttccaccgc
caggagctgcagatctctgtggaggtgaacgaccggccgtcccaggcctccacgcacggc
aacctggccgtggcgtaccaggcgctgggcgcccacgaacaggccctgcagcactacctg
caccacctggccatcgcgcgggagctccgggacgcccagagcgaggccagggcgctagcg
aacttgggcaacttccacagctggaggggcgagtacgcccaggccctgccgtactacggg
cagtacctggccctggcccccggcctgcaggacctggagggggaagggaaggtttgccac
aacctgggctacgctcactactgcctggggcagtacggcgacgccgtcaggtattacgag
caggacctggccttggcgaaggacctccaggacaagctctcccaggccaaggcctactgt
aacctgggcctggcccacaaagccctgggggagcacaagaaggcggaggagtgtcagaga
tacctgctctccctggcgcaggccttggacaacacacaggcggtgttcagggctttcggt
aaccttggtgacgtgtgcgcgtgtcggggcgacctcccggcggcgctgaggttctaccag
cagcagctgagtctggctcagaaggtcagcgatcagaggatggaggccgacgcctactcg
gccctcgggtccgtccacaggctgctccgccagctggacgcggccttgtccttccacagc
caggagctgacggtgcgcaaggacctggccgatcagcagggggagtgccgcgccctcggc
cacctggcggccgtgcacatggcgctgggcgactacgccaccacattccagtgttaccgg
gcccagctgggcctggcgcagggactcagggacgccggcctggaggcgcaggtccacggg
aacatgggcatcaccaagatgaacatgggcgtgttcgaggaggccatcggctacttcgag
cagcagctggccatgctgcagcagctgagcggcaccgagagcgtgctggaccgcggccgg
gcctacgggaacctggcggactgctacgacgctctgggggaccacgaggaggccattcag
tactacgagaagtacctggcggtggctcagagtctggaccacgtccaggaccaggagaag
gcctacaggggactcggcaatgcacacaggtccatgggcagcctccagcaggccctggtg
tgcttcgagaagcggctggtggtggcccacgagctgggcggcgaggccgggggcaaggcc
caggcctacggcgagctgggcactttgcacagccagctgggcaactacgagcagtcgctg
tcctgcctggagcaccagctgagcatcgcccgcgcggcgggggataaacccctggaggcg
gaggccagcgacgcgcttggcggcgtctaccagctgatggccgacaacgagacggcgcta
cagtggcaccagagggcgctggacatcggcgagcagacggggtgcgtgaggagccagggc
cgggcctacgggaacctggggctgacctacgaggccctcggcaagtacgagcgggccgtg
gtcttccaggagcagcacctgagcgtggcggcgcagaccagcgacctgatcggcaaaacg
ctggcctacgggagcctgggcaggacgcaccacgccctgcagaactacgcccaggccgtg
atgtacctgcaggaaggtctgcgtctgtcggagcagttgggtcgcagagaagatgaggca
aagattcgccatcgcctcggcctctcgctgtgggccggagggaacctggaggaggcccag
caccagttgcacaggtcctccgtgctgttcgaggcgatccgtcgggagacgcagcacagc
accgactgcaagctgtccctgttcgacctgcagaccagctcgtaccaggccctccagagt
gtcctcgtcagcctcggacgccacgacgaggcgctggccacggcggagcgaggccgcacg
cgagccttcgccgacctcctggtggagcggcagaaggggggcgggccggccgcgacctcc
gacccctacgggcccgtcaccgtggagcacatcctggagacggtgaacgggcagcgggcc
ctggtgctctactactcgctggcgggggggtttctgtacagctggctgatctccccgggg
acaggtatcgtgaagttcaacgaggtgtacctgggagaatccggcctggaggagttccat
gacgccggtggtgggagtccgcagggcggaggaggtgggggaggtcctctgtctctggat
cagtacatcggcaacgccagggaggctctgggcgtggacagccatcacagcaggcggtgc
tccggcagcgagacggagagcgaggcaggagacctgttggagctgaaccacgaccccacc
gggtacctccgcatggtgtcccgcaacaacctcttcaacagaagctgtcagagcatgacg
agcctctacagctccacggtgtctccggcgaaagacgtcccgtcgtctccgccgcggcgg
ccgagcgccctgagcagagccccgcccctccgggccctgtacgacctgctcatagcgccc
atggagggggcgctgatgcacagcagtggacccgtgggccggcacaggcagctggtgctg
gtgctggagggggagttgtacctcgtcccgttcgctttgctcaaaggcagctcctccaac
gagtacctctacgaaaggttcagcctcatctcggtgccttcgttaggcagcctgggagcc
gccatcaagccgccgtcccgccgcggggggcccgcgctgtgctcggacggaggctcggtg
gccgcggtggtcggggctcctcgcctgcccccctcggtgatggaccgctggctgtggggc
ccgctgccctcggcccaggacgaggctctgtggctgggggagcagctggggtgccgcccc
ctggccggcgccggcgccaccaaggagcgcgtgctggcggcgctgggcccagcggagtgc
gtccacttcgccacgcacgtgtcctggaagctcgccgccttggtgctggcccccggccgg
gagcacggcgccggggaggggccggcggcggctgggcggccgcgcgaaaggtcgccgcgc
ggcgggtcggcgtcttcgctgggaagggctgaggagacgagctaggacggggagagcgcc
tactacagtccgccgcttcacgacttcctcctcacggccgcggacatccgggacctgagc
ctgtccgtcaagctggtggtcctgagggtgtacccagagtccagcagcagggcgacggcc
gacggcgtggtgggtctgaccccagccttcctgggggcgggggtccagtgcgtgtgcgtg
tccctggggccggggcccgtggcggcctccaagctcttcacgcacgccttctactcgggg
ctcctcgccggcaccaaagccagcgcggccctgacggacgccatgaaggggctgcaaaac
aacaagcacttctcccacccctccaactgggcaggctacatgctggtgggggccgacgtg
aagctcaacagccccatgtctctggtggctcaggccctcgcagagatcctgcagcacccg
gagagagcgagggacgccctgagggtgctgctgcacctggtggagaaatctctgcagcgc
atccagagcggccagagcaacccgatgtacacgtctcagcagagcgtggagaacaaggtc
ggcggcgtccccggctggcaggcgctgctctccgcggtgggcttccggttggacttctcg
gcgggcggcgccgggccccccgccgcggttttcttccccacctcggaccccggggaccgg
ctgcagcagtgcagcaccaccctgcaggctctgctgggtctgacccccccgggcctgcag
gccctctgcaagctggtcaccgcgtccgaggccggagagcagctcatccacaagctccac
caggtgctggtgcagctgcaggcgggcgacagggagcaggacttctctctggcccccgtc
caggtggcgataagcgtgcagctctggaggcttccgggctgccacgagttcctggcggcg
ctcgggttggacctgtgcgaggtgggtcaggaggaggtgctgctgaagacggggaagcag
gccagcaggcgcgtcgtgcacttcgccctgcaggcgcttctcgccctctttgaatccacg
gagctccccaagcgcctgagcatggatagctcctccctcctggagtctctgtcctcctcc
cagtccgcctcccagccccactccttggccctctcctttggctggtaccccccccagccc
tccttcctgcccccggcgtgcccggacaacctctcctgcgacgccatctccgtctacagc
ctcagctccctcgcctcctcgctcagcttcctgtcgcggcccgagcccgccgggagtgac
atcatcagccagcgcccgcaccagcaagagccggagaggcctcgcggcggcgggggcctc
tacgcctcacaccgccactcgggcggcctgccgagaggtcgaccgagcgatcccggagga
ggaggaggaggaggcggggaggaggagtacgagggctactccattataagcagtgagccg
ttggggcgggggaggagggagtgcgacacgttgcccctgcccgggggacacagatccgcg
agaggcggagccagaagggggtccgccgggggtcacgggtgcccgctcaccatttcctcc
aagggaagcatcagcacgccgacgtcgccgattaaagcgccgccgccgccgccaaaagcc
cccaacggctccagagccgagctggacacctgtcctcctcggaggacggggaaagggaag
gcgagcagctcggagtcggaccagtccagcacggagacggacagcacggtgaagtcccag
gaggagaggacggtgccggtgggacagctggacccgcaggagctggcccagaagattttg
gaggagacgcagagccacatgcaggccgtggagagccttcagaaggcggcgaggggggcg
gggtctcccgcaaccgggggagcgcgaggctttcagccctccgagagcagcgccttcagc
cggccccccagcggagccggcctgaagcctcgctcctcccctctctcccccccggcccct
cccccgacgcgtcccaaacccccgtcacgctcctcgtcgctgcagatgctcgttgtcccg
gctcccccctcgcccccgtcgtccctcccggaggcgtccctccggctcaggccgaggtat
ccaacctcgccgtattccggccacatctcgccggccctctcctgctcctcgggggggtcc
gtctccggcccctccagccccgcagacacccccgaaccggatcggtccaagcgggaccac
aagatccaggccgtccacgacttaaagaccttctgggcgggacagaaacacgagctgccc
agcgccgccagcctgctgcgaggggggaccggtaggaggatgaccacggtccagaaggac
gtgctgggcttgctccacctctccccgagacacgagccctcgagcaaaagcgccgaggcg
tcgaacagcgaccggccgaacgtacggcaaaaaacgggggccaagccgccgccaccgccg
ccgccaccgaaaggaggcgtgaagctcccctcagggaacggattcaagttcctctccccc
ggacacttcttcccttcctccaaatgctga
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integrated database retrieval system
