Gasterosteus aculeatus (three-spined stickleback): 120832185
Help
Entry
120832185 CDS
T07457
Symbol
grin3a
Name
(RefSeq) LOW QUALITY PROTEIN: glutamate receptor ionotropic, NMDA 3A
KO
K05213
glutamate receptor ionotropic, NMDA 3A
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04020
Calcium signaling pathway
gat04080
Neuroactive ligand-receptor interaction
gat04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
120832185 (grin3a)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120832185 (grin3a)
04082 Neuroactive ligand signaling
120832185 (grin3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gat04040
]
120832185 (grin3a)
Ion channels [BR:
gat04040
]
Ligand-gated channels
Glutamate (ionotropic)
120832185 (grin3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Motif
Other DBs
NCBI-GeneID:
120832185
NCBI-ProteinID:
XP_040054191
LinkDB
All DBs
Position
XIV:complement(9813122..9844845)
Genome browser
AA seq
1225 aa
AA seq
DB search
MMMKTVVMMVMNGPAARAGTGVSVLLLCALVFSPPCAHCHPQPCQVLKRIGHTVRVGALD
VQPRLLSATGGGSEEWDTDRMELEKERKTSAGAPGYGSLRTRGTANNPRGASRSRSQARQ
REENTSRENRVFAPRDSILLAVEAINRAGLLPFNLSLELVMAVGSGLGELPAFSGSSAGS
PEGEDPLSFVESVCHTVVVQGVSAMISFPRNRDEFVKLEFVSLALQVPVVSVVQREFTRQ
SQNPLHFQLAMRTVEAPPSRLLSTLLMMNGWWDISILLCQEWDISDFLLLINNNSRFHLG
TLVNLTTIASTLSSSSSSSVPSGTASDVAAGAEASSSSLPYFSPAGSSSSASSSTSSSKL
DQQQALMRQLEALREPSSTRGVVTFGCEIREVRRLWTLASRMTLPEFHWVLGDSQNVAEL
RTEGLPLGLLAHGVMEAPSLDHFVHDSLELVARAVGSAAQENPALALIPGTTNCMDIQKR
NGSSGEYLSRFLSNTSFEGQTGLISRDTHSQNVVSEAHHYIWSLQLDPLGQPTWTRLGRW
RSGEVLMDRRAWPSHQGSGAGGDWRRSARLHMRVVTLVEHPFVFTREVDGDGLCPAGQLC
LDPLTNQSSVLKGFFQNLAGPNGSVPTELKKCCYGYCIDLLEKLGEDMGFTFDLYIVGDG
KYGGFKNGRWTGLVGDLLSGAAHLAVASFSINSARSQVIDFTSPFFSTSLGILVRTRDTA
APIGAFMWPLHWSMWLGIFVSLHVTAVFLTLYEWHSPFGMTPRGRNRDRVFSFSSALNVC
YAILFGRTVAIKPPKCWTGRLLMNLWAIFCLFCLSTYTANLAAVMVGEKTYEQLSGIHDP
KLHHPSQGFRFATVRESSAEDYLKKSFPEMHEYMRRYNVPATPDGIHQLKADPQRLDAFI
MDKALLDYEVSIDADCKTLTVGKPFAIEGYGIGLPQNSALTSNISELVSQYKSDGFMDML
HDKWYKVVPCGKRSFAVTETPQMGIKHFSGLFVMLCVGVALSLLTTLAELIVYKLVIPRV
KEPRFKYWLHTSQRLHRALNSVFTDDKLPTVTKPEKRCNEGNNQSASWNPSESSHCNRRG
ILPQDVQNDLEAPSSQELRSAPSPSPLPHSHSLPLMEKHPLIATNSNGRSDLSGRGLTRL
GAGVGVGLSPLVQELSELEAQILAIKQQLQSAMRRKRELEQYQSENQQANQTAPSQPTAH
PSNQFVQYTQSHQQTNQHANTLPDF
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgaagacggtggtgatgatggtgatgaatggcccggcagctcgagcaggcacc
ggggtctccgtcttactgctgtgcgctctagtcttttccccaccgtgcgctcactgtcac
ccgcagccgtgccaagtactgaaacggatcggccacacggttcgggtcggcgctctggac
gttcagccccggttgctctccgctaccggcggcggctctgaggagtgggacaccgatcgg
atggagttggaaaaagagcgcaaaacaagtgccggtgcgcccggatatggaagcctgagg
actagaggcaccgccaataacccgcggggagccagcaggagtaggagtcaggcacgccag
cgggaggagaacacctccagggagaaccgggtgttcgctccccgagactcgatcctcctc
gccgtggaggcgatcaaccgggccggactgctgccattcaatttgtcattggagctcgtc
atggccgtcgggtccggactcggcgagctgcctgcgttctccggctcgtccgccggcagc
cccgagggcgaggacccgttgtccttcgttgagagtgtgtgtcacaccgtggtcgtgcag
ggggtttccgccatgatctcctttccgcgaaaccgggacgagttcgtgaagttggagttc
gtctcgcttgcgcttcaggtgccggtggtcagcgttgtgcagagggagtttacgcgccaa
agccagaatcctctccatttccaactggcgatgcggaccgtggaggccccaccatcccgt
ctcctctctaccctgctgatgatgaacggctggtgggacattagcattttgctctgtcag
gaatgggacatcagcgatttcctcctcctcatcaacaacaactcccgcttccacttgggc
actcttgtcaatctgacaactatcgcctcaaccttgtcatcgtcctcatcttcgtcggta
ccttcgggaacggcatcggatgtggcagcaggggcagaggcgtcctcgtcgtctttgcct
tacttctcccccgccggctcctcctcttctgcttcttcgtccacgtcgtcctccaaattg
gaccagcagcaggctctgatgcggcagctggaggccctgagagaaccttcgtccaccagg
ggagtggtgacgttcgggtgcgagatccgcgaggtgcggcgtctgtggacgctggccagt
cggatgacgctcccagagtttcactgggttttgggggacagccagaatgtggccgagctg
agaacagagggtttgcccctggggctgctggcgcacggggtcatggaggccccctctctg
gatcactttgtccacgactcgttggagctagtggcgcgggccgtgggcagtgcggcacag
gagaatcccgctctggcgctcatacccgggactacgaactgcatggatatacaaaagaga
aacggcagctcaggggagtacttgtcaagatttctatccaacacatcgtttgagggccag
acaggtttgatatccagagacactcacagccagaatgtcgtctcggaggcccatcattac
atctggtccctccagctggaccctctagggcagccgacgtggacccgcctgggacgctgg
cgcagcggcgaggttctgatggaccgcagggcctggccaagccatcagggatccggcgcc
ggaggagactggcgccgatcggcgcggctgcacatgcgcgtggtgactctggtggagcac
ccgttcgtattcacccgggaggtggacggggacggcctgtgtcccgcgggccagctgtgc
ctcgacccgctcaccaaccaatcttcggttttgaaaggatttttccagaacctcgcagga
cccaacggatccgtccccacggaactgaagaagtgttgttatggttactgcatagacctg
ctggagaagctgggagaggacatgggcttcactttcgacctctacattgtaggcgatggg
aagtacggggggttcaagaacggtcgctggaccggattggtgggggacctgctcagcggc
gcggcccacctggcggtggcctcttttagcattaattcggccagaagccaggtcattgac
ttcacctcgccctttttctccaccagcctgggaattctggtgcgaactcgagacacagcc
gcacccatcggcgccttcatgtggcctctccattggtccatgtggctcggcatctttgtc
tccctccacgtcaccgctgtcttcctcaccctgtacgagtggcacagcccgttcggcatg
acgcctcgcggacgcaaccgcgaccgagtgttctccttctcctccgcgctcaacgtgtgc
tacgccattctcttcgggaggacggtggccatcaagccgcccaagtgctggacgggccgc
ctgctgatgaacctgtgggccatcttctgtctgttctgtctgtccacctacaccgcaaat
ctagctgccgtcatggtcggggagaagacctacgaacagctgtcagggatacatgaccca
aagttacaccatccctctcagggattccgattcgccacggtgagagaaagcagcgcagag
gactacctcaagaagagtttccccgagatgcacgagtacatgagaagatacaacgtcccg
gcgaccccagatggcattcatcagctcaaggctgaccctcagagactggatgcattcatc
atggacaaagcgctgctggactacgaggtctccatagatgcagactgtaaaacactaaca
gtggggaagccctttgctatagaaggctacggcatcggcctgcctcagaactctgctctc
acctccaacatctcagagctcgtgagtcagtacaagtcagacggcttcatggacatgctg
catgacaaatggtacaaggtcgtgccctgcgggaagcgcagcttcgccgtgaccgagacg
ccgcagatgggcatcaagcatttctccggcctgttcgtgatgctctgtgtgggcgtggcc
ttgtccctgctgaccacactggcagaactcatcgtgtacaagctggtgatcccgagggtc
aaggagccacgcttcaagtattggctgcacacaagccagagattacaccgggccctaaac
tcagtcttcactgatgacaaactgccaactgttaccaagcccgagaagaggtgcaacgag
ggaaacaaccagtcagcatcttggaatccctcggagtcctctcactgcaacaggcgtggg
atccttccacaagacgtgcagaatgacctggaggctccttcctcccaggagcttcgctca
gcgccgtccccgtctcccctgcctcattcccactcccttcccctcatggagaaacacccg
ctcatcgccaccaactccaacggtcgctccgacctgtcggggcggggcctcacgcgcctg
ggggcgggcgtcggcgttggcctgagcccactggttcaggagctgtcagaactggaggcc
cagatcctcgcaatcaagcagcagctgcagtcagccatgaggaggaagcgggagctagaa
cagtaccaatcggaaaaccagcaggcgaaccagactgcgccaagtcagcccactgctcac
ccgtccaaccagtttgttcagtacacccagtcgcaccagcagaccaatcaacacgcaaac
acgctgccggacttctga
DBGET
integrated database retrieval system
