Gasterosteus aculeatus (three-spined stickleback): 120832246
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Entry
120832246 CDS
T07457
Name
(RefSeq) uncharacterized protein LOC120832246 isoform X1
KO
K06745
programmed cell death 1 ligand 1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120832246
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
gat04090
]
120832246
CD molecules [BR:
gat04090
]
Proteins
120832246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
V-set
Ig_2
NACHT
C2-set_3
ig
C1-set
C2-set_2
AAA_30
nSTAND3
AAA_18
AAA_25
ABC_tran
NPHP3_N
AAA
C2-set
RuvB_N
AAA_33
Izumo-Ig
AAA_16
AAA_5
Mg_chelatase
AAA_22
AAA_17
Motif
Other DBs
NCBI-GeneID:
120832246
NCBI-ProteinID:
XP_040054330
LinkDB
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Position
XIV:complement(7826263..7832568)
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AA seq
591 aa
AA seq
DB search
MFFFKPHSKSFPPSSNGTRGARGDPAVFARTSVSVKASSRGGGDHNVEKWRSSKHGRPQI
SPREQERRAAGNKPLENQQVGGHGLSISMDWSLIVFLQVMFQPSLSVLFTVWAGKSTYEA
QFGGDVVMSCRFKPKPSNPQADLKVTWNWISSTSVREVYRMDNGEEVSASRDPDYRGRVK
LFTEELKEGVAKLQVSRLRINDSGTYQCSVQTEQGADYKAITLSVVAPYKTVAKRIQKTA
DEGWLLLTCQSQGYPESSVTWHNGHLQRPPGPDTTAVSTEDLLYTVTSQIRVRSTDKNNY
TCSFAQDGNSATFHIPDEIPVLHVQKDALIVVLSIGLIMVVIIIAVLVYRRRKGFRLGTR
NLPVCCGGKSIPAVDCLKREKDNEEEIGVFNEVSVEENLGVFLKASYGDVSPEVRHHWNS
FVVEELPHKLSNNEGQPVNLQALLPEAGETLFLEGPPGSGKTTVAHILVSSWSEGSAHPL
SKFLDLSTLPLLFYVDCGKAKGDLFQEITIQRSLTERMSTEDELRTVLTSSREALLLLDG
YREGNPLFDASLRKFLVEKGGCRVLVVACQGHWPTLKDTVEPKRVLQLQAV
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgtttttttttaaaccacattcgaagtcatttcctccttccagtaatggaactcgagga
gcacgtggtgacccggcggtgtttgccaggacttctgtgtcagtgaaagcgtcgtctcgt
gggggcggtgatcataacgtggagaagtggcgaagctcaaaacacggccgacctcagatc
agcccgagagagcaggagagacgcgccgcggggaacaagccgcttgaaaaccaacaggta
ggaggacacggtttatcgatctcgatggactggtccctaattgtatttttacaagtgatg
tttcagccatctctctcagtgttgttcactgtttgggccgggaaaagcacatacgaggcg
cagtttggaggagatgtcgtgatgagctgcaggtttaagcctaaaccgtcgaatcctcag
gctgacctgaaggtgacctggaactggatcagctccacctcggttcgagaagtgtaccgt
atggacaacggggaggaggtcagtgcgtcccgagatccggactatcggggcagagtgaag
cttttcactgaggagctgaaggaaggcgtggccaagttgcaggtctcaaggctccggatc
aatgactctgggacctaccagtgttcggtgcagacagaacaaggagctgattacaaagcg
ataactttgtccgttgtagcaccttacaaaactgtggctaaacgcattcaaaagactgca
gatgagggatggttgctgctaacctgccagtctcagggataccccgagtcctccgtcacg
tggcacaacggacacctgcaaagacccccgggacccgacaccaccgctgtatcaaccgaa
gacctgctttacacagtcaccagtcagatacgcgtccgatccacagacaaaaacaactac
acttgttcctttgcacaggatgggaattctgcaacgtttcacatcccagatgagattcct
gttcttcatgtccaaaaggatgctctcatcgttgtgttgagcatcggactgataatggtt
gtcatcatcatcgcagtgctcgtgtacagacgacgaaaaggttttcggcttggtaccagg
aaccttccggtctgttgtggggggaagtctattcctgctgttgactgcctcaaaagagaa
aaggacaacgaggaagagataggagtttttaatgaagtttccgtggaggaaaatttgggg
gtgtttctgaaagcaagctatggtgacgtcagcccagaggtgagacaccactggaattcc
tttgttgtggaggagctgcctcacaagctgagtaacaatgagggccaacctgtcaatctt
caagctttactgccggaagcaggagagacacttttccttgaaggacccccaggaagcggc
aagacgaccgtggcccacatcctggtctcttcttggtctgaggggtccgcacatccactc
tccaaattcctcgatctcagcactcttccacttctcttttacgtcgactgcggaaaagcg
aagggtgacctgtttcaggaaatcacgattcagcgctctctcacggaaaggatgtccacg
gaggacgagctgaggacggtgttgaccagctcccgcgaggctctgctgctgttggatggc
tacagagaggggaacccacttttcgacgcgtccttgaggaagttcctagtggaaaaagga
gggtgcagggtgttggtcgtggcctgccaaggacactggcccacactcaaggacacagtt
gagccaaagagggtgctgcagctgcaagcagtatga
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