Gasterosteus aculeatus (three-spined stickleback): 120832426
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Entry
120832426 CDS
T07457
Symbol
rin3
Name
(RefSeq) LOW QUALITY PROTEIN: ras and Rab interactor 3
KO
K23687
Ras and Rab interactor 2/3
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120832426 (rin3)
Membrane trafficking [BR:
gat04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
120832426 (rin3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
GPW_gp25
ADDB_N
Ribosomal_uL24m-like
DUF3450
Motif
Other DBs
NCBI-GeneID:
120832426
NCBI-ProteinID:
XP_040054608
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Position
XV:15529433..15543269
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AA seq
1102 aa
AA seq
DB search
MEAGVVCKATSHASPGTGSLDTPSTPPTASVLPSPPPSLPSSNPPIRPCRPKPPPPLVKS
SQSPLCAPAPVSTPPPLPPLPPSISKPPPPLSPTLKPSPPLSIPPPTPVSHNPLPLSLPP
PLAPTPVSPAPLTPLQQSVSSDLTPSLSPLPTALLPAISCPAPSSASLPPPPPPPPNSVI
PPSPPAPLLVNPIDRLVASVSVWQPKGLSRDQATSVLEKEMAGAFLLLGAALSVRLPDEG
GAAPVHHLTVKQHKTFLHLDGSSLAFDDIFKLILFYTASRDILAVPLRLPRAITTASQRE
ELDVISAMGADFWTSDLNRPVKDRDLALDQNHNSLYLYVNPVTVEESDIKDLNPPQPPTV
PTQIRTSSLQNGEVPQRISTEVKGQAQTTPTQDIKYKRPPPRPPSLSSGSGTGLLFSSPP
SLHTSPSAAERKEEGRGGASEKEERKSMSTSLTPSRPPVPPQGRTAPPLPPAPLRRTSSR
RSANTEEAEGTEREKGQEAGDEETASKSGQLDEGVQQQNGSQRQENEVTNDREKGEREDE
GEEKEVKMDKAEHEQKSCPHSAPLMKKPSRPVPPPRRKPSSPDAPVCPKQAGGGSANQTA
AIRGPPPSPARRPDVSLYSPQGGSVLVTDPDSPSTSSTEEEGEPNQEQEQSPNHPAESRS
PKAAVRRTPTTVMLGRARYRLSTVLTGLISHDRRLTQRLVELARDPHSYFGNLVKEHRMF
TLETMSKHSSSTELLQEIRQMMTQLKSYLLQSTELQAMLEPQHQYTQDKLESLAEAALCK
SVLKPLREPIYEHLEKLHTSDGSLKQLAQNQSGILGSTTTALGITTAVPEASSMEKINIK
LNNLHLEYSPQKKIELMLKACKLIYDSMSVSSPGRAHGADDLLPVMMYVLARSNLSSLQL
DVEYMMELMDPSLALGEGSYYLTTTYGALEHIKTFDQQRSATRQLSREVQDSIHRWERRL
TLNKERMVQGSVRDFLTVCCPEIGASPKTLGVLPTTTMQELAEQCATRFEQDAYILSVYM
DGVQQPLAPTELALTAKNSSQPGAYCLVFHPIDQPVERPPPGRSCPTDLPPAPPARSAST
GDSAAEDTVEPEGEEEESLISL
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atggaagccggcgtcgtttgcaaggccaccagccacgcgagccctgggacaggatccctt
gacacgccatccaccccccccactgcctccgtccttccgtctcctccaccctccctgccc
tcctccaatcccccgatccggccatgtcgaccaaaaccaccccctcccttggtgaagtcc
tcccagtcccccctgtgtgctcctgcacctgtgtccactccgcctcccctccctcccctt
ccaccctccatctcgaagcccccgcctcctctctctcccaccctgaaaccttccccgccg
ctctccattcctccccctacccctgtttcccacaaccctctccccttgtctcttcctccc
cccctggctcctactccagtgtctcctgctcccctgactcctctacagcaaagtgtctcc
tccgatcttactccctccttaagtccacttcccactgctctgttgccagcgatctcatgc
cccgccccctcctccgcttctcttcctcctcctcctcctcctcccccaaactcggttatc
ccaccatcacctccagctcctctattagtgaatcccatagatcggctggttgcgagcgtt
tccgtatggcagccaaaaggactcagccgggaccaagcgacgagtgtattggagaaagag
atggctggggccttcctgctcctcggagcggcgctgtcagtgcgcctgcctgatgaaggg
ggggcggcgcccgtgcaccatctgacggtcaagcaacacaagacatttctccacttagac
ggctcctctttggcgtttgatgacatcttcaaattgatcttgttctacactgccagcagg
gacattctggccgtgccactgaggttaccccgcgctattaccacggcatctcagcgagaa
gagttggacgtcatctctgcaatgggtgcagatttctggacgtccgatctcaaccggccg
gtaaaggaccgggacctggctttggaccagaaccacaacagtctgtacttgtatgttaac
ccagtcaccgtggaggagagtgacatcaaagacctaaaccccccccaacctcccacagtc
cccactcaaatacgtacctcctccctgcagaatggagaggtcccacagaggatcagcaca
gaagtcaaaggtcaagcccaaaccacgcccacccaggacattaaatacaaacgccctcca
ccacgaccccccagcctgagctcagggtcagggacgggcctcctcttctcctcccccccc
tcacttcacacttcaccttcagcagccgagagaaaagaggaaggaagaggcggagcaagc
gagaaagaagagaggaagtcaatgtcaacatcactcactccatcgaggcctcccgttccc
ccacagggccgcaccgcgcccccgctgcctcccgctcctctccgccgcacctcctccagg
agaagcgccaacacagaggaggcagaggggacggagagagagaagggacaagaggcaggc
gatgaggaaacagcgagtaaatcaggtcagctggatgagggggtccaacagcagaacggt
agccagcgtcaagagaatgaggtaacaaatgaccgagaaaagggagagagagaagatgag
ggggaggaaaaagaggtgaaaatggataaagcggagcacgaacagaaatcctgcccccac
tctgcgccattgatgaaaaagccgtcccgtccagtccccccgccccggaggaaaccctct
tcaccagacgcacctgtgtgccccaagcaggcagggggaggatcagccaatcagaccgct
gcgatcagggggccccctccctcaccggcgaggcgtcccgatgtgtccctgtactcgcca
caggggggcagtgtgctggtgaccgatcccgactccccctccaccagcagcacggaggaa
gagggagagcccaaccaggagcaggagcaaagccccaaccaccctgcagaaagccgcagc
cccaaagcagcagtgaggagaacccccaccacggtaatgttgggccgagcccgctaccgc
ctgtccaccgtcctcacaggcctcatcagccacgaccgccgcctcacacagcgcctcgtg
gagctggccagggaccctcacagctactttggtaacctggtaaaagagcaccgcatgttc
accttggagaccatgtccaagcactcctcctccacggagctgctacaagagatcagacaa
atgatgacccagctgaagagttacctgctgcagagcacagagctgcaggccatgctggag
cctcagcatcagtacacgcaagacaaactggagagcctagcggaagccgctctatgtaag
agcgtactgaagccactgagggagccaatatacgagcatcttgaaaagctgcacaccagc
gacggcagcctgaagcagctggcccagaaccagtctggcatcctgggcagcaccaccacg
gcgttggggataaccactgccgtccccgaggcctcatcgatggagaagatcaacatcaaa
ctgaacaacctccatctggagtactccccccagaaaaagatcgagctcatgttgaaggcc
tgcaagctcatctacgactccatgtctgtcagcagtccagggcgggcccatggcgctgac
gacttgctgcctgtaatgatgtatgtcctggctagatccaatctgtccagcctgcagctg
gacgtggaatacatgatggaactgatggacccatcgttggcactaggagaaggttcctat
tatctgaccaccacctacggcgccttggagcacatcaagacttttgaccagcagaggtca
gcaacacggcagctcagcagagaggttcaggactccatccaccgctgggagagacgactc
acgctcaacaaggaacgcatggtccaaggatctgtgcgggactttctgacagtgtgctgt
ccagagatcggagcgagcccaaaaactctgggtgtcctccccaccaccaccatgcaggag
ctggccgagcagtgtgccacacgctttgaacaagacgcctacatcctcagtgtgtacatg
gatggcgtccagcagccactggctcccaccgagctggccctcacggcgaagaacagttcc
cagcccggagcctactgcctcgtcttccaccctatcgaccaacccgtcgagaggcccccg
ccgggacgcagctgcccgactgacctgcctccagctccccctgcaaggagcgcgtccacg
ggggactctgcagccgaggacaccgtggagccggagggggaagaggaggagagtctgatt
agcttgtag
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