Gasterosteus aculeatus (three-spined stickleback): 120832542
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Entry
120832542 CDS
T07457
Symbol
exd1
Name
(RefSeq) piRNA biogenesis protein EXD1 isoform X1
KO
K18740
exonuclease 3'-5' domain-containing protein 1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gat03019
]
120832542 (exd1)
Messenger RNA biogenesis [BR:
gat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
120832542 (exd1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
120832542
NCBI-ProteinID:
XP_040054847
UniProt:
A0AAQ4R634
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Position
XV:2459377..2462993
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AA seq
528 aa
AA seq
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MDLDNAKLLHFFRGKFIKLTLKSSSYFGVVQRINHNKTLVLGDVVGASNGCQIPGFKLFF
GHEIINVEFPSEANTDSGNIEHHRLEEHLSLETFQPCMKTLPFDDDEDNEDYVNFIVIDE
FYEKFGSAVMHIKKQHVIGVGADGVELFKHDRLCWLQIATKTKVYLFDIMILGDRAFKNG
LSMILQSKHILKVIHDCRAIAGCLSVQFGVKLANVFDTQVADVMGFSSKTGGLLPDRVST
LQEVVSLHLKVPPSQLSSLQIKSQLTKEEREMLYKRPCPMPLLKVMALSVIHLLPLRLVL
LDSLMIDYVALVDSYLNSGYYEPDELQHVGMESVFELPRELKQLEKMRQEWAVDHYPVTE
RGLLDRFNPRSPSQTLPANGHQRLTVESPSPAIPPLPTPSPPRASDGFSVDVESADPAPV
PLDSSDLRDHMPVNAPVSLGAGGGNAEVLMDITGGGSPFGRRHAAPPPPCAFGRGFLLPV
SQDQKPTQKMGGVTTPGRMGAAPFRHKVMLELTCRRTPESISSSLFSC
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggatttggacaacgccaagttgttgcatttcttcagggggaaattcatcaaactgacc
ctgaagtcctcctcgtacttcggcgtcgtccaacggatcaatcacaacaaaacgctggtt
ttgggggacgttgttggtgccagtaacggctgtcagattcctggattcaagctgttcttc
ggtcatgagattatcaatgtggaatttcccagtgaggcaaacactgacagcggaaacatc
gaacatcacagactggaagagcatttgagtttggaaacgttccagccgtgcatgaagaca
ctcccattcgatgacgatgaagacaacgaggactacgtcaacttcatagtcatcgatgag
ttttatgagaagtttgggtctgctgtgatgcacatcaagaagcagcatgtgatcggcgtg
ggcgctgatggagtcgagttatttaagcacgacagactgtgttggctgcagattgccact
aaaacgaaggtttacctgtttgatatcatgatacttggagatcgggcctttaagaacggc
ctttctatgatcctgcaaagtaagcacatactgaaggtcatccatgactgcagagccatc
gctggatgtctgagtgttcagtttggagtgaagctggccaacgtcttcgatacgcaggtt
gcggatgtcatgggcttctcctctaagacgggaggtctacttcccgacagggtcagtact
ctgcaggaggtggttagtctccatctgaaggtgcccccgtctcaactctcatcccttcag
ataaagtcccagctcaccaaggaagaaagggagatgttgtacaagcggccgtgtcctatg
cccctgcttaaggtgatggctctgtcggtgatccacctcctccctctcagactggtgctg
ctggattctctcatgatagactacgtggccctggtggattcatacctcaacagcggctac
tatgaacctgatgaattgcagcatgtcggcatggagagcgtgtttgagctgcccagagag
ctcaaacagctggagaaaatgcgacaggagtgggctgtcgaccactaccctgtcaccgag
cgaggcctgctggatcgcttcaacccccggtctccgtcccagactttacccgccaacggc
caccaacgcctgactgtggagtcgccttcgcccgcgatccctcccctcccgacgccgagc
cctccgagagccagcgatgggttttctgtggatgttgaatcggcagatccggctccagtc
ccactcgactcatcggacctcagggatcacatgcccgttaacgcccccgtgtctcttggt
gcaggtggagggaacgctgaggtactgatggacataacaggtggaggaagtccttttgga
agaaggcacgcggcccccccgccgccctgtgccttcggaagagggttccttctcccggtg
tcacaagatcagaaacccacccagaaaatggggggcgtaacgactcctggtaggatgggg
gcggctccttttaggcataaagtgatgctcgagctgacctgccgaaggacgcctgagtcc
atctcatcctcacttttcagctgttga
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