KEGG   Gasterosteus aculeatus (three-spined stickleback): 120832557
Entry
120832557         CDS       T07457                                 
Name
(RefSeq) histone-binding protein RBBP4 isoform X1
  KO
K10752  histone-binding protein RBBP4
Organism
gat  Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03082  ATP-dependent chromatin remodeling
gat03083  Polycomb repressive complex
gat04218  Cellular senescence
Brite
KEGG Orthology (KO) [BR:gat00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    120832557
   03083 Polycomb repressive complex
    120832557
 09140 Cellular Processes
  09143 Cell growth and death
   04218 Cellular senescence
    120832557
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gat03036]
    120832557
Chromosome and associated proteins [BR:gat03036]
 Eukaryotic type
  Nucleosome assembly factors
   Histone chaperones
    CAF-1
     120832557
  Histone modification proteins
   HAT complexes
    HATB complex
     120832557
   HDAC complexes
    Sin3A-HDAC complex
     120832557
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     120832557
    PRC2.2
     120832557
  Centromeric chromatin formation proteins
   Kinetochore proteins
    MIS16-MIS18 complex
     120832557
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    120832557
  Chromatin remodeling factors
   NuRD complex
    120832557
   NuRF complex
    120832557
   NuRF complex (fruit fly)
    120832557
SSDB
Motif
Pfam: WD40 CAF1C_H4-bd WD40_CDC20-Fz WD40_Prp19 Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR75_1st Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd WD_LRWD1 WD40_RFWD3 Beta-prop_DCAF12 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st ANAPC4_WD40 eIF2A WD40_MABP1-WDR62_1st Beta-prop_RIG_1st MIOS_WD40 Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 120832557
NCBI-ProteinID: XP_040054873
LinkDB
Position
XV:3224801..3228625
AA seq 427 aa
MADKDAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
YSVHRLVLGTHTSDEQNHIVIASVQLPNDDAQFDASHYDSEKGENMEFGGFGSVSGKIEI
EIKINHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRGHQ
KEGYGLSWNPNLSGCLLSASDDHTICLWDISAVPKEGKIVDAKTIFTGHTAVVEDVSWHL
LHESLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILASGSADKT
VALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPE
DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGA
ADSEVQT
NT seq 1284 nt   +upstreamnt  +downstreamnt
atggccgacaaagatgctgcgtttgacgatgctgtggaggaaagggtgatcaatgaggag
tacaagatctggaagaagaacacccctttcctctatgacctggtcatgactcacgccctg
gagtggcccagcctcactgcccagtggctgcccgatgtcaccagacccgaggggaaggac
tacagcgtgcaccggctggtcttgggaacgcacacgtccgacgagcagaatcacatcgta
attgccagcgttcagctgcccaatgatgacgcccagttcgacgcgtcgcactatgacagc
gagaaaggagaaaatatggagttcggaggctttggatccgtaagcgggaagattgagatt
gagatcaagatcaaccacgagggtgaagtgaacagagcccgctacatgcctcagaatccc
tgcatcattgccacaaagacccccaccagcgacgtgctggtctttgattacacgaagcat
ccctcaaaacccgacccctctggagaatgcaccccagatctgcggttgcgaggccaccag
aaggagggctacggcctctcctggaacccgaacctcagcggctgcctcctcagtgcttca
gacgaccacacgatctgcctatgggacatcagcgcggtgccaaaggaaggaaagatagtg
gacgccaagaccatcttcacgggccacaccgccgtggtggaggacgtctcctggcacctg
ctccacgagtcgctctttggctccgtggccgatgaccagaaactcatgatctgggacaca
cggtccaacaacacctccaagcccagccacgccgtggacgcccacaccgctgaggtcaac
tgcttgtccttcaacccctacagtgaatttatcctggccagtggatctgcagataagact
gtggctctttgggacctcaggaatttgaaactgaagctgcactcgtttgagtctcacaag
gacgagatcttccaggtgcagtggtctcctcacaacgaaaccatcctggcttccagcggc
accgaccggaggctcaacgtctgggacctcagtaagatcggagaggagcaatcccccgag
gacgccgaggatggccctccggagctgctgttcatccatggcggacacacggcgaagatc
tccgacttctcttggaaccccaacgagccgtgggtcatctgctctgtatcagaggacaac
atcatgcaggtttggcaaatggctgaaaacatctacaacgacgaagacccagaaggtgct
gcagacagcgaggtccagacatga

DBGET integrated database retrieval system