Gasterosteus aculeatus (three-spined stickleback): 120832600
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Entry
120832600 CDS
T07457
Name
(RefSeq) DNA-binding protein RFX7-like
KO
K09175
DNA-binding protein RFX7
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gat03000
]
120832600
Transcription factors [BR:
gat03000
]
Eukaryotic type
Other basic domains
RF-X
120832600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX_DNA_binding
RFX5_N
Pox_D5
Cdc6_C
DUF7200
Motif
Other DBs
NCBI-GeneID:
120832600
NCBI-ProteinID:
XP_040054947
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All DBs
Position
II:11902575..11917543
Genome browser
AA seq
1426 aa
AA seq
DB search
MAEEDLQQHADRGARSQPGLLTGLQGAEASALQLRINNSICKSVQSKVENILLDVEKFSD
IEKLYLYLKLPCGPSSCIDKSDQSALSSSRTQQMHAINWIRHHLEEYPETSLPKQEVYDE
YKSFCDNLNYHPLSAADFGKIMKNVFPNMKARRLGMRGKSKYCYSGLRKRPFVQMPSLPS
LDLHKTGDGCDVLESPSQLSNIKEDVRFAACDLVCEWAQKVLKRQFDAVEDLARFLIDSH
YISNKSLAALTIASGTSTEVKPPQVGSAFLPTAEAHSFQPHVTTLCSPSVDAKQQLQRKI
QRKQQEQKLYSPLPGEGQTKRADDSVPCPSPTPPSPQPTIGIVVSAVPSPIAVQRSRQLL
SPSPMGAVESKMLPINIQMVTQPVQTVKPNPKTPQNILTSPAGERTARQRYAQILPKPVA
TTAITLRSPSTMIIGRSPAKTGMTTCHVSPVNLVQVTAVPLAPNSSNNTISPANVTLRPA
SAGISCTMVGEDISSNQSMRSTSAVPILTPFAVSGQTFNTQNVDVEMEVEAIHEYSQMQN
PGAVVFPQETIANRPPGALQRAASVPIPQSKGLLGMEDTSITNCNGIFSTSSNTVATVGN
SNDGANNTRAFSLTPSTQNTSTVSLLNTSTPALFGGSSSLISVKECFTSAKSLRKRLGHS
PDFSPIKRAFVPQQPIEGAAGLGYGIRNMVGNILRPGAPARPESAPAAREVETKMINRPI
AHVHAPCTSSVRCSGFYSVATTQSSLQRKSMSTVMETCTSVSHPFIQKPHGYTMSSLHGV
PNNPGLQMHSGVSDVRSSATGSLEQPQQHTYPSSTPGTTPLGFLNPNPASSSNQLSMQTD
TDYFTFDEDVTQDSIVEELVQMEEQMKLNNLQEFGGCATLQGQQAVMPDNAMSNIQTMTP
YHHASNCRSNPIHTPTPTPTPTPTSEMMGGVQGFTRESPFSRIASTTPVESALGSSRHTP
VGTPQSNCSSTVPPSPVECRNPFAFTPISNSGITGFHDGSIISSSPVKPMQRPMATHPDK
TRLEWMNNSYNNSNGGLNKASSGIGILPSYQSLLGEHFQKPHAFAVPHARHHDSHLGRLT
PISPVQQQGANVGKQEGFAVPAPLDNKSTNSPSSTFRCRSVSPAVHQRNPGNLPLVPCSV
ASPFNSPVTPEMLNIFPHSQTPFGVNSMAQRSHSVPLNIMMQTEVGPTPGQHCNSENIAN
VLLSKLDDDSVRGLGINNLSSSYTARMNLTQILESDPSLSCSDHHFSLMTSDSTSRCSSQ
RPNYLIENAINEQMMLSIADSQVQSASREQHLQQAQSMLLTLSSQQHREELQQQLDFSST
VKDLLADNSLTAGSQLVEPVSELTAGTADFPCEIRMTSELSSSINDLNALDTDLLFDPNQ
QHGQYQHPAEEFVNDVLFQQITSDTAHSSGLDWLDSKDHSTVGLMS
NT seq
4281 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggaggacctccagcagcacgcggaccgcggggcgaggagtcagcccggcctg
ctcaccgggctgcagggcgccgaggccagtgctctgcagctgaggatcaacaactccatc
tgtaaatcggttcaatcgaaagtggaaaacattctgctagatgtggagaagttctcagac
attgaaaaactatacctctacctaaagttgccttgtggtccaagcagttgcattgataaa
agtgaccagagtgccctctcatcaagccgaacacagcagatgcacgcgatcaactggatc
cgccatcatttagaggaatacccagagacgtctcttcccaagcaggaggtctatgatgaa
tacaagagcttctgtgacaatctcaactaccacccactgagtgctgccgattttggaaaa
attatgaaaaatgtcttcccgaacatgaaggcgcgtcgactcggcatgaggggaaaatca
aaatattgctacagtggactgaggaagaggccctttgttcaaatgccatctttaccctct
ctggacctccataaaacaggggacgggtgtgacgtcttagagtccccgagccagctgagt
aacataaaggaagatgtgcgctttgcagcctgtgatctggtgtgtgagtgggcccaaaag
gtgctgaaacgccagtttgatgctgtggaagacttggctcgcttcctgatcgacagccat
tacatcagcaataagtccctggctgctctcaccatcgccagcggcacttcaacagaggtc
aagcctccacaggtgggttcagcgttccttcccactgccgaggctcactccttccagcct
catgtgaccaccctttgctcaccgtctgttgacgcgaagcagcagctccagaggaagatc
cagaggaaacaacaagagcagaagctgtactctcctttacctggggagggacaaaccaag
agggcagatgacagtgtcccttgtcccagcccaacccctccgtcacctcagccaaccatc
ggcatcgtggtctccgccgtcccgagccccatcgcggtacaacgaagcaggcaactgttg
tcgcccagcccaatgggagcagtagagagcaaaatgctgcctattaacatccaaatggta
actcagccagtgcagacagtgaaaccgaaccccaaaaccccacaaaatattcttaccagt
ccagcgggagagcgcacggctcggcaacgctatgctcaaatcctgccaaaacccgtggcc
acaaccgctatcactttgcgctcgccctccacaatgatcatcggcaggagccccgccaag
accgggatgaccacatgtcatgtcagcccagtcaatttggtccaggtgacagccgtaccg
ctcgcacccaacagcagcaataacaccatttcccccgcaaacgtcactctgcggccggcc
tccgcaggcattagttgtactatggtgggggaggacatcagttccaatcaaagcatgagg
agtacctccgcggtccccattctgaccccgttcgccgtttccgggcagacttttaacact
caaaacgtcgatgttgagatggaagttgaagctatacatgaatacagccaaatgcaaaat
cctggcgctgttgttttccctcaagagacaatagcaaataggcccccaggggccttacag
agggctgccagtgtgcccatacctcagtccaaaggcctcttgggcatggaggacacatcc
attactaattgcaatggaattttctctacaagctctaacactgtggcaacagtcggaaac
agtaatgatggcgctaataatacaagggctttctccttaactccctccactcaaaatacc
agcactgtttctttactgaacaccagcacaccagctttatttgggggaagcagcagtcta
atatcagtaaaggagtgtttcacgtccgccaagagcctcaggaaacgtttgggccacagt
ccagacttttccccgatcaaaagggcttttgtaccccagcagccaatagagggcgctgct
ggtctcggatacgggattagaaacatggtcggtaacatcctcaggccaggagctccagct
cgacctgaaagtgcaccagctgccagagaggtagagacaaaaatgatcaatcgccccatc
gctcatgtgcacgcaccgtgcacttcctctgtcagatgcagtggcttctactctgttgcc
acaacacagagctcattgcagagaaaaagcatgtccactgttatggaaacttgcacctca
gtcagtcacccgttcattcagaaaccgcacgggtacacaatgtctagcctccatggcgta
cctaataaccccggcctccaaatgcattcaggtgtgagtgatgttaggagttcagccaca
gggagcctggaacaacctcaacaacacacctatccttcatctacccctggtactaccccc
ttaggctttttgaatcctaatccagcttcatcgtcaaaccagctttccatgcagaccgat
acagactactttacctttgatgaggatgtgactcaagacagcattgtggaggagctggtg
cagatggaggagcagatgaaacttaacaacctgcaggagtttggaggctgtgctacactg
cagggccaacaggccgtgatgccagacaacgcaatgtctaacatccagaccatgactcct
taccatcacgcttcaaactgccgcagcaacccgatccatactccaacacctactccaact
cccacgcccacatccgaaatgatgggaggcgtccaaggcttcaccagagagagccccttc
tcccgtattgcctccacaaccccagtggagagcgcactggggagcagtcgacacacccca
gttggcactccccaatccaactgcagcagcaccgtgcctcccagtccagtggagtgcaga
aacccgtttgcgttcacgcccatctccaactccggcatcactggtttccacgacggcagc
atcatctccagcagtccagtcaagcccatgcagaggccgatggctacccacccggacaag
accaggctggagtggatgaataacagttataacaacagcaacggaggcttaaacaaggca
agcagtggaattggaatcctccccagctatcaaagcctactaggtgaacatttccaaaaa
cctcacgctttcgccgtcccccacgcacggcaccacgacagccatttggggcgcttgact
cccatctcgcccgtgcagcagcagggagccaacgtgggcaagcaggagggcttcgctgtg
ccggcgcctctggataacaaatctaccaactcaccttcttctactttccggtgtcgcagt
gtgagtcccgctgtgcatcagaggaaccctggaaaccttccccttgtcccttgttcggtc
gcgtctccttttaactctcctgtgacaccagagatgttgaacatctttccccacagtcaa
acaccttttggggtgaacagcatggcgcaaaggagccattctgtgccactcaacatcatg
atgcaaaccgaggtcgggcccacgccgggacaacactgcaacagtgaaaacatcgctaat
gtccttctgagcaagctggatgacgacagcgttcgggggctgggcatcaataatttatcc
tccagctacactgcacgcatgaacctcacccagatcctcgagtcggaccccagcctctcc
tgcagtgaccaccacttcagcctgatgacttctgactccaccagcagatgcagctcgcag
aggccaaattatctcatcgaaaatgccattaatgaacaaatgatgctctcaatagctgac
agccaagtgcaatcggcttctagagagcagcatctacaacaagcccagtctatgttgtta
acgttgagctcacagcagcatcgagaagaactgcagcagcagttggatttcagcagcact
gtgaaagacctcctggcagacaacagccttaccgctggcagtcagctcgtggagccggtg
tccgagctaactgcgggaacagcggatttcccttgtgaaatcagaatgacatcggagctc
tccagtagcatcaatgacctcaacgcattggacacagaccttctgtttgaccccaaccag
cagcatgggcaatatcaacacccggcggaggagtttgtgaatgatgtgctgtttcagcaa
attaccagcgacacagcacattcaagtggacttgattggctcgatagcaaagatcattca
actgtcgggttgatgagttag
DBGET
integrated database retrieval system
