Gasterosteus aculeatus (three-spined stickleback): 120832912
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Entry
120832912 CDS
T07457
Symbol
myo5aa
Name
(RefSeq) unconventional myosin-Va isoform X1
KO
K10357
myosin V
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
120832912 (myo5aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gat03019
]
120832912 (myo5aa)
04131 Membrane trafficking [BR:
gat04131
]
120832912 (myo5aa)
03029 Mitochondrial biogenesis [BR:
gat03029
]
120832912 (myo5aa)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gat04812
]
120832912 (myo5aa)
Messenger RNA biogenesis [BR:
gat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
120832912 (myo5aa)
mRNA cycle factors
P-body specific factors
120832912 (myo5aa)
Membrane trafficking [BR:
gat04131
]
Others
Actin-binding proteins
Myosins
120832912 (myo5aa)
Mitochondrial biogenesis [BR:
gat03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
120832912 (myo5aa)
Cytoskeleton proteins [BR:
gat04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
120832912 (myo5aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_22
Myosin_N
HTH_17
DUF5382
AAA_16
nSTAND3
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
120832912
NCBI-ProteinID:
XP_040055539
LinkDB
All DBs
Position
II:complement(16011715..16051397)
Genome browser
AA seq
1849 aa
AA seq
DB search
MNRELEYMFVKRARVWIPDAEEVWKSAELNKDYKNGDASLQLMLEDGTNIEHKLDPKTKN
LPYLRNPDILVGENDLTALSYLHEPAVLHNLKVRFMDSKLIYTYCGIVLVAINPYETLGI
YGSDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMR
YFATVSGSTSEANVEQKVLASNPIMEAIGNAKTTRNDNSSRFGKYIEIGFDTRYRIIGAN
MRTYLLEKSRVVFQADEERNYHIFYQLCASSHLPEFKMLKLSSANDFLYTRQGRSPVIDG
VDDTKELSSTRKAFTLLGINESNQMGLFQVLAAILHLGNVQIKDRDSDSSIIPPNNGHLT
AFCDLVGVTYQDMSQWLCHRKLKTATETYIKTIPRLQATNARDALSKHIYAKLFNWIVEH
VNKALITNFKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYM
KEQIPWTLIDFYDNQPCINLIEAKMGILDLLDEECKMPKGSDDSWAQKLYNTHLKTCSLF
EKPRMSNRAFIIQHFADKVEYQCEGFLEKNKDTVNEEQINVLKASKKFPLLVELFHDGEK
AISPTGQVPGTGGRTRLSIKPEKGREKSSKEHKKTVGCQFRNSLQMLMETLNATTPHYVR
CIKPNDFKLAFSFDPKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDV
LPDRRLTCRNVLEHLVQDQDKYQFGKTKIFFRAGQVAYLEKLRAEKLRAACIRIQKTIRC
WLARKKYLRKRSAAITIQRFTRGHQARRLAKFMRRTQAATTIQKYQRMCVEKKRYRQKQA
AALVMQTILRAYMARQKYRALLRESKVVIIQKRVRGWLARCWYKRCLVSLVYLQCCFRRM
KARRELKKLKIEARSVEHFKKLNKGMENKIMQLQRKLDEQNKENRLVNERLAGLENTYTT
ESERMRGELSRLRGAEEDAKNKGHQVTSLLEELEKLRKELSSTQKEKKTIEDWAQNYRSE
MEKMVSELKDQNGSLKKEKDDLNRLIQEQSQQMTEKMARAILEETQQLKTDLNEERSRYQ
NLLTEHLRLEEKYDDLKEEMVSSNVPKAGHRRRDSTHSSNGSEYTYNSEYAELEDGSRAG
EDVTRGMDTSLTLKLQKRLTELEQEKQSLRNELENKEDQFQRARARDDVEFKKARGAELE
YESLKRQELESENKKLRHDLKEIRQSLVGNAATGAGAPGSPAYKVVLDQLNASCEELEVR
KEEVLILRSQLVSQKEAMHHKDEKETMTEPSVYVEDVSKLKDAGELKQAYVGLKDTNRLL
EHQLQTQRRGYDSEVESLRGELQNVKEENNRQQQLLAQNLQLPPEARIEASLQHEITRLT
NENLELLAEDPTASREARVIILRRMVDLMEQLEKQDRTIRKLKKQLKVYSKRIGEMGAGQ
TEGQTSPGQMVDEPIHPVNIPRREKDFQGMLEYNKEDELKLVKNLILELKPRGVAVNLIP
GLPAYILFMCLRHADYVNDDQKVRTLLTSTINSIKKILKKRGDDFETVSFWLSNTCRFLH
CLKQYSGDEAFMKHNSPRQNEHCLSNFDLAEYRQVISDLAIQIYQQLIKCMENILQPMIV
SGMLEHETIQGVSGVKPTGLRKRTSSIADEGTYTLDSILRQLSAFHSTMCQHGTDPELIK
QVVKQQFYIIGAVTLNNLLLRKDMCSWSKGMQIRYNVSQLEEWLRDKGLMTFGAKETLEP
LIQAAQLLQVKKKTDEDADAICSMCLGLTTAQIVKVLNLYTPVNEFEERVSVSFIRTIQT
RLRDRCESPQLLMDTKMIYPVTFPFSPSSLALETIQIPSSLNLAFLTRV
NT seq
5550 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgggagttggagtacatgtttgtcaaaagggctcgggtgtggatccccgatgcc
gaggaggtgtggaagtccgccgagctgaacaaggactacaaaaatggcgacgcctccctg
cagctcatgctggaggatggaacgaacatcgagcacaaactggaccccaagacgaagaac
cttccttacctgcgtaatcccgacatcctggtcggcgaaaatgacctcacggcactcagc
tacctgcacgagccggccgtgctgcacaacctcaaagtccgcttcatggactccaagctc
atctacacttactgtggaatcgtcctggtggccatcaacccgtacgagacgctgggtatc
tacggctcggacatcatcaacgcgtacagcggtcagaacatgggagacatggacccacat
atcttcgctgtggccgaggaggcttacaaacagatggccagggacgagaggaaccagtcg
atcattgtgagtggggagtccggagcaggaaagacggtatcagccaaatacgccatgaga
tactttgctacggtcagcggctccaccagcgaggccaacgtggagcagaaagtcttggct
tccaaccccatcatggaggccattggaaatgcaaagaccacacgaaacgacaacagcagc
cgctttgggaaatacatcgagatcggcttcgacacacgctaccgcatcatcggcgccaac
atgaggacgtatctgctggagaaatcacgagtggtgtttcaggccgacgaggaaaggaat
tatcacatcttctatcagctctgtgcatcatcccatctgcctgagttcaagatgctgaag
ctaagcagcgcaaacgacttcttgtacaccaggcagggccggagcccggtaattgacggc
gtggatgacacaaaggagctgtcctccactcgcaaagccttcacgttgctcggtattaat
gaatccaatcagatgggtttgttccaggtgttggctgctattcttcatctcgggaacgtg
cagataaaggacagagactcggacagcagcatcattccacccaacaatggccacctgacg
gcattctgcgatttggtgggcgtgacctaccaggacatgtctcagtggctgtgccacagg
aagctgaagacggccacagagacgtacatcaagaccattccccgcctgcaggccaccaac
gcccgcgacgcgctctcaaaacacatctacgcgaagctcttcaactggatcgtggagcac
gttaacaaagcgctaatcaccaattttaaacagcactccttcatcggggtccttgacatc
tacgggtttgagacctttgagatcaacagctttgagcagttctgtatcaactacgccaat
gagaaactccagcagcagttcaacatgcatgtgttcaagctggagcaggaggagtacatg
aaggagcaaatcccctggactctgattgacttctacgacaatcagccctgcatcaacctc
atagaggccaagatgggcatcctggacctgctggacgaggagtgcaagatgcccaaaggt
tccgatgattcttgggctcagaagctctacaacacccacctgaagacctgctccctcttc
gagaagccacgcatgtccaaccgcgctttcatcattcaacattttgccgacaaggtggag
taccaatgtgaaggtttcctggagaagaacaaggacacagtgaacgaagaacagatcaac
gtgctgaaggccagcaagaagtttcccctgctggtggagctgttccacgacggggagaaa
gccatcagtcccactggtcaggtccccggcaccggaggccggacgcgcctcagcatcaaa
cctgagaagggccgtgagaagagcagcaaggagcacaagaagactgtcggctgccagttt
cgtaactcgctgcagatgctgatggaaactttgaacgcgacgactccgcactacgtacgc
tgcatcaaacccaatgacttcaagctggccttctcgtttgatcctaaacgtgcggtgcag
cagctcagagcctgcggcgtcctagaaaccatccgcatctctgctgcagggttcccatcc
agatggacgtaccaggagttcttcagccgatacagagtgctgatgaagcagaaggacgtg
ttacctgacaggaggttgacctgcagaaatgtcctggagcatctggtccaggaccaggac
aaatatcagtttggtaagaccaagatcttcttccgggccggccaggttgcctacttggag
aagttgagggcggagaagttgcgcgctgcctgcattcgcatccagaaaaccattcgctgc
tggctggcacgcaagaagtacctgcgcaagcgcagcgctgccatcaccatccagaggttc
accagagggcaccaggctcgccgcttggccaagttcatgcgtcgcacgcaggcggccacc
actatccagaagtaccagcgcatgtgcgtggagaagaaacgctacagacagaagcaggct
gccgctctggtcatgcagacgatcctcagagcttacatggcccggcagaagtaccgggcg
ttactgcgggagagcaaggtggtgatcattcagaaacgcgtccgtggctggttggctcgg
tgctggtacaagcgctgcctcgtctccctggtctacctgcagtgctgcttccgcaggatg
aaggccaggcgcgagttgaagaagctgaagatcgaggctcgctcggtggagcacttcaag
aagctcaacaaaggcatggagaacaagatcatgcagctgcagaggaaactcgacgagcag
aacaaagaaaaccgcttggtcaacgagaggctagccggtctggagaacacctacacaaca
gagagcgagcggatgcgtggcgagctgagccggctgcgaggggcggaggaggacgccaag
aacaaaggccaccaagtgacgtcgctgctggaggagctggagaagctgaggaaggagctg
agttccacacagaaggagaagaagaccatcgaggactgggcgcaaaactacaggagcgaa
atggagaaaatggtctcggagctgaaggatcagaatggctcgctgaagaaagagaaggac
gacttgaacaggttgattcaggaacagagtcagcagatgaccgagaaaatggcccgtgcg
atactagaggagactcagcagctgaagaccgatctgaacgaggagcgatctcgctaccag
aatctcctgacggagcaccttcgtctggaggagaagtacgacgacttgaaggaggagatg
gtttcctcgaacgtccccaaggctggccacaggagaagagattccacccacagcagcaac
ggatcagagtacacgtacaactccgagtacgccgagttggaagatggttcccgtgccggc
gaggatgtgacgcgaggaatggacacctcgctgaccctcaagctgcagaaacgtttaacc
gaactggagcaagaaaagcagtcactgcgcaacgaactggaaaacaaagaggaccagttc
cagcgggctagagccagggatgacgtagaatttaaaaaggctcgtggggcagagctggag
tacgagtccctgaagcgtcaggagctggagtccgagaacaagaagctgagacatgacctg
aaggagatccggcaaagcctggtgggtaacgcagctacgggcgctggggccccgggctcc
ccggcctacaaggtggttctggaccagctcaacgcctcctgtgaggagctcgaggtccgt
aaggaggaggtgctgatcctgcgctcccagctggtcagccagaaggaagccatgcaccac
aaggatgagaaggagaccatgaccgagccttccgtctacgttgaggatgtgtcgaagctg
aaggacgcgggtgaactcaagcaagcttacgtgggcctcaaagacaccaacaggctactg
gagcaccagctgcagactcagcggagaggttacgacagcgaggtggagtcgctgcgcggt
gagctgcagaatgtcaaggaggagaacaaccggcagcagcagctcttggcccaaaacctg
cagcttcctccggaggcccgaatcgaagccagtctgcaacacgagatcacgcggctcacc
aacgagaacctggaactcctggctgaagaccccacagcatcccgagaggctcgagtcatc
attttacgacggatggttgatctgatggagcagctggagaagcaggaccgaaccatccgc
aagctcaagaagcagctgaaggtttactccaagaggatcggcgagatgggggcgggtcaa
accgagggacagacgtctccgggacagatggtggacgagccgattcaccctgtcaacatt
cctcgcagggagaaagacttccaagggatgctggagtacaacaaggaggatgagctcaaa
ctggtcaagaacctcatcctggagctgaagcctcgcggtgtggctgtgaatctgatccca
ggtctgccggcctacatcctgttcatgtgtctgagacatgcggactacgtcaacgatgac
cagaaggtccgcaccctgctcacctcaaccatcaacagtattaagaagatcctcaagaaa
cgaggagacgactttgagaccgtctctttctggctatcgaacacgtgtcgcttcttgcac
tgtctgaaacaatacagcggagacgaggctttcatgaagcacaactcgccgaggcagaat
gagcactgtctgtccaacttcgacctggcagagtacagacaggtgatcagcgacctggcc
atccagatctaccagcagctgatcaaatgcatggagaacatcctccagcccatgatagtt
tctggcatgctggaacacgagaccatccagggagtgtctggggtgaagcctacgggcctc
cgcaagcgaacgtctagcatcgcagacgagggaacctacaccctggactccatcctgcgg
cagctcagcgccttccactctaccatgtgccagcacggcaccgaccccgagctcatcaag
caggtggtgaagcagcagttctacatcatcggagccgtcacgctcaacaacctgctgcta
cgcaaggacatgtgctcctggagcaaaggcatgcagatcaggtacaacgtgagccagctg
gaggagtggctcagagacaaaggtctgatgacattcggagccaaggagactctggagcct
ctgatccaggccgctcagctgctgcaggtgaagaaaaagactgacgaggacgccgacgcc
atctgctccatgtgcctggggctcaccactgctcagattgtgaaggtcttgaacctctac
actccagtcaacgaatttgaggagagagtatccgtgtcattcatacgaaccatacagact
cgcttgcgagatcgttgtgagagtccccagttgttgatggacacgaagatgatctacccg
gtcaccttcccgttcagcccttcatccctcgccctggaaaccatccagatccccagctcg
ctcaacctggccttcctcacccgcgtctaa
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integrated database retrieval system
