Gasterosteus aculeatus (three-spined stickleback): 120832947
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Entry
120832947 CDS
T07457
Symbol
cdan1
Name
(RefSeq) codanin-1 isoform X1
KO
K19531
codanin-1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gat03036
]
120832947 (cdan1)
Chromosome and associated proteins [BR:
gat03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
120832947 (cdan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Codanin-1_C
VMAP-M8
Motif
Other DBs
NCBI-GeneID:
120832947
NCBI-ProteinID:
XP_040055597
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All DBs
Position
XV:complement(10859501..10869768)
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AA seq
1322 aa
AA seq
DB search
MAALLESLLCKKVDIKTVLEWLKNDEEGERLAFSEPQVSVHKQEFVPFLLNFLREQSSRA
LTHGPATPAKTPNRLRPGAQGCRSAAGAAAGSRSASRVQLFSPSPSVSPGSEWDAASHSL
SGVNPFSSPSFATGWSPASRPSGHERRSGQKVSLGDYMVSPPDLQKSPSIQSQKSRRRSG
GNMALGGQGKHGGWRQAHHSDEIGRRPSRGGGNSRISEQVSPPSVGQLNLNNLEDFPPVG
SSPISPAASKPSRRINPTPVSEERAHSKPKTCFTSIPFTESSSPSLAVDALEGPLTVGSP
LSLQEERELLKKEKTKRAQQVSSPLLSSLDPCTPTKSGLGAGSKVTPELQTPCPEPSKVT
FSSELDLLAELYCTCISENLVPNIFLELFFVVQLLTSQSAHTHDDDERESLCSVNSEIME
RCYLRRVHNCVYFAVKVLQNQFQLVAHLDKCTLRLLAENERVASFSPALRDRLTEAQGGS
TAQHSPSVSTFIHSVPFQPATDNQSNFCSTHAFHIFKKQRDIFYEVLREWEDFHKEQGWN
FDAALGRRIRGIMSQLTSAGNHSHFARLFLKQLIQVCKGPGVNSSPGETPDADLLGMLGA
DSLGRLKRLEERLIQPQGVVGPCPPPSFPGHQEFFRDFLQAASCCHLNQHLQDSLCQQLL
QLDEVSILSPPASVAGVDEEGDGDMEQQDEKQRFTSVLLLARLLAKFLGFISFLPYQTSE
RPSREIRDAAVALRSKSVPVLDVCAVLSNSMKRRRTILTVPWLVEFLSMMDFVGPLLLCY
RTALGKLLLLYRRMLLGRCGEMCYLNKLLTVSVLGWLFQIPVIPEDIFFTNEFTEVAKLE
DSSTSAAGLDCIPLVDQQLLYTCCPFLGEFRKLLAAFVSGSSAKSGGIIRKITPTSAELK
DAPTANRSQQKLQVDLEQAFFHNQPPSLRRTVEFVAERVGSNAVKHMKATLVSELVERGE
KMLRDGLASPNSNPSKLNDSICAQLCVAGLEAMAKATRFCSEKSPEAIRILLSDETSPAV
RTTSENITKRLATEKACSWLSANITALIRREWKSRYDRVMKTAAGPPPPHSRLDVEAAAP
EPPTKEEPSAAPKTRRGSERVTSCPPHCSHGASLPSDVLIEMKEWLSIAVGPRTNDELLT
GSQAKALLQRVADTLACRKFSTATSEQMLLNSTVLLACRLVSAELPVLSPSEGDGDVAGS
GSEPPVRALLEQLAALWQADGCSSAPLHLLFAQLTVSAVLKASDAEWKNYLFLVRKLVDG
QVLSEEEVISHWRKLTNLALPAKLVENFQLQSQSIKPPLPLAELQSQLDVLQVSQQAVEG
AT
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcttttagaatctctcctgtgcaagaaagtggatattaaaacggttttggaa
tggctaaagaatgatgaggaaggtgaacggctggcgttcagtgaaccgcaggtgtcagtt
cacaaacaagaattcgtcccatttcttctgaacttcctgagagagcagagcagccgagca
ctgactcatggccctgccacgccggccaagacccccaaccgcctcagacctggtgcacag
ggctgcaggtcagcggcaggtgctgcagctggttctcggagtgccagccgggtccagctg
ttttctccttccccatcggtgtcccctgggtctgagtgggacgctgcgtcccactctctg
agtggggtcaaccccttcagcagcccctcctttgccacaggatggagccccgcctccagg
ccttcaggtcatgaacgccgttctggccagaaggtcagtctgggggactacatggtttct
cctcctgacctccagaaaagccccagcatccagtcgcagaagagccgcaggagaagcggt
ggcaacatggcactggggggacaagggaaacatggaggatggcggcaagcacatcacagt
gatgagatcggaagaaggccgagtagaggaggagggaacagtaggataagtgagcaggtt
tcacctccatctgtggggcagctcaatttgaacaacttggaggactttccccctgttggg
tcttcacccatttcacctgcggcatcaaaaccatcaagaagaataaacccaacgccggtc
agtgaagaacgtgctcactccaaaccaaagacctgcttcacctccatcccattcactgaa
tcttctagtccctcattagctgtagatgcgctcgagggcccattgaccgtcggcagtcct
ctgagcctgcaggaagagagggagctactaaagaaagaaaagacaaagcgtgctcagcag
gtcagctctcctctgctgtcctctctggacccttgcacccccaccaagtcagggcttggg
gcgggatctaaagttacaccggagctgcaaacaccatgtcctgaaccatccaaagtcacc
ttctcttcggaactggatctccttgcagagctgtactgtacctgtatttctgaaaacctt
gtgccaaacattttcctggagcttttctttgttgtgcaattgctaacgtctcaatcggct
cacactcatgatgacgacgaacgggaaagtttgtgttcagtgaattcagaaattatggag
cgatgttacctgagacgagtacacaactgtgtgtattttgcggtgaaggttttgcagaat
cagtttcagttggtggctcatttggacaagtgtactctccgtctgctggcagagaacgag
cgggtggcgtctttctctccggctctcagggaccgtctgactgaggcccagggggggagc
acggcccagcactctccttcagtttccactttcatccactcagtcccattccagccagct
actgacaaccagtccaacttctgcagtactcacgccttccacatctttaaaaaacagaga
gatattttttacgaggtgctgcgagaatgggaggactttcacaaagagcaggggtggaac
tttgacgctgctctcggcagaaggataaggggaattatgagtcaactcacttctgcagga
aaccattcacattttgcccgtttgttcctgaagcagcttattcaggtgtgtaaagggccg
ggcgtgaacagctctcctggagagactcctgacgcagacctgctgggcatgctgggagcc
gacagcctgggccgtctgaagcggctcgaggagcgtctcattcagccgcagggagtcgtc
gggccctgtcctccaccgtcctttcctggtcaccaggagttcttcagggatttcctgcag
gcagccagttgctgccacctgaaccagcacttgcaggacagcttgtgtcagcagctcctc
cagctggacgaggtgtccatcctgagtccgcctgcttccgtcgcaggggtggacgaggag
ggagatggggacatggagcagcaggatgagaagcagcggttcacctcagtgctgctcctg
gctcgtcttctggctaagtttctgggattcatttcctttctgccttaccaaacgtctgag
agaccgtccagggagatacgggacgctgctgtagccctgcggagcaagagtgtcccggtg
ctggatgtgtgtgccgtgctgagtaacagtatgaaaaggaggcgcaccatcctgactgtg
ccctggctggtggagttcctctccatgatggactttgttggtcccctcctgctttgctat
agaacggcattgggcaaactgctcctcctgtacaggagaatgctgctgggaagatgtgga
gagatgtgttacctgaacaagctactcacggtgtccgtgttgggttggctcttccagatc
ccagtgattcccgaggacattttcttcaccaatgagttcaccgaggtggccaagctggag
gacagcagcacgagtgctgcggggctcgactgcattcccctggtggatcagcagcttctc
tacacatgttgtccatttcttggtgagttccgtaagctcctagctgcctttgtgtcggga
agctccgccaaaagtggaggaattatccgcaagattacccccacttccgccgagctgaag
gacgcgccgacggccaacaggtcgcagcagaaactgcaggtggacctggagcaagccttc
tttcacaaccagcctccgtcgctgcgtcgcaccgtggagtttgtggccgagagagtcgga
tccaacgctgtcaagcacatgaaggccacgctggtgagcgagttggtggagcgaggtgag
aagatgctgcgggatggtctggcgtcgcccaactctaatccctcaaagctaaatgactcc
atctgtgctcagctgtgtgtcgccggattggaagccatggccaaagccaccagattttgc
agtgagaagagtccagaggcaatacggattctgctctctgatgaaacgtcccctgctgtc
cggaccacgtctgaaaacatcaccaaacgtcttgcgacagaaaaggcctgcagctggctc
tccgccaacatcacagccctgatcagacgagagtggaagagcaggtacgatcgcgtgatg
aagaccgcggccggcccgccgcctccacactctaggctggatgtcgaggctgccgcgccc
gagccgcccaccaaggaggagccctcggcggcccccaagacgaggcgaggaagcgagaga
gtgacgtcctgcccgccgcactgcagccacggcgcctcgctgccctccgacgtcctcatt
gagatgaaggagtggcttagcatcgcagtaggcccccggaccaatgatgagctgctcacc
ggctctcaggcgaaagcgctgctgcagagagtggcggacacgctggcctgcagaaagttc
tccactgcgacgtcagagcagatgctgctgaactctacggtgctgctggcctgcagactg
gtgtccgccgagctgcccgtcctgtctccgtcagagggggacggggacgtcgcgggttcg
ggatcagaacctccggtccgagcgctgctggagcagctcgccgcactgtggcaagctgac
ggctgttcctccgccccgctccacctgctcttcgcccaactcaccgtctccgctgtgctg
aaggccagcgacgccgagtggaagaactacctgtttctggttagaaagctggtagacgga
caggtcttgagcgaggaagaggtcatatctcattggaggaagctaaccaacttggccttg
ccagcgaagctggtggagaatttccagctgcagtcacagagcattaaacccccgttgcct
ctggctgagttgcagagccagctggacgtgctgcaggtctcccaacaggcagtagagggc
gctacatga
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