Gasterosteus aculeatus (three-spined stickleback): 120833075
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Entry
120833075 CDS
T07457
Symbol
rab11fip5a
Name
(RefSeq) LOW QUALITY PROTEIN: rab11 family-interacting protein 1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120833075 (rab11fip5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120833075 (rab11fip5a)
Membrane trafficking [BR:
gat04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
120833075 (rab11fip5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
Motif
Other DBs
NCBI-GeneID:
120833075
NCBI-ProteinID:
XP_040055826
LinkDB
All DBs
Position
15:complement(1573712..1591583)
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AA seq
1350 aa
AA seq
DB search
MSSLTVEEDQKWFPTHVQVTVLRGRGVRGKGKHGTSDVYTIIQLGREKYSTCVAEKTTEP
EWREECSFELQPGVLETGCPAGSNELVLVEEQQGVDGTGSVLGDRRXSSWPSSSQESRVV
KNEWYKLNSKTGKKEKERGDIQVTVQFTRNNLTASMYDLVMKDKGASTFGKLKERIKGKK
RCSEEDSAPAALPSGYGSLVRMRQRLPSDGGGEEDYEDDEGGEARRSKMRTFFLRGKLRK
SSDTRSSTSLGSESSESSSRGGSLSPTAGISVVVSDLSNSPSNSSNLTADNSPDHTKSSS
LICEFGDDDDGEITIAVPRPAANGRLPRGVRPTDPGKPAAPSGLAPLQRSLPLSVSLQNL
RPSTDLLKSPAGDGRRWSFDKPCEEEKAAIAAALEQSGPMLGDEEEEEEEEGGQFAPPGS
ASSSRVESGKKPRSDMFTQRQDESQQAGEQKHKGWFGSKDSHAKPSLVVSPKLEPSTDPR
PPPSPPGAPVDPAPLVSPLHHTNPFSHSQAAAPPISPRNPFFSLLQHNPFYGATLTAQPL
KPPLPPLPHLSSARPPIAQLFPQTRADPPAEAAAAAMDEAGERPLEGEVPASVKLPGASA
RAGEVDPDSEWDECFDAFAAGRLQSPEDPTAGKTQRSDALNADDGASLPATEANANEALR
RRPSTGSAPDAQRAVFQVTGTYHSDTFAQFLETIPEHESFDSDNVPLSNSPDAWLQANQA
NSATNDLNHTNAHRAPSGPPFVELSSSSPDPGSSGIGSSEAEEEFVSCPSSFSDKFCASS
SEEAEVRLVDSDILRFERSSDPSVVRPSESEDDPNDRSADLSAADVGQRTVIQHGESSES
SPAPQTPPLTPQQHEINAAPPSPNLSGAERLPELQPKSKEPSQFTAELDGSAQDFFDTFA
PVSDTAGVMTFTTPEGTLAHPSLRIITSSPEASLRSPNPFGFVGDLLNASNMASGPGRDL
GGASLAARASDQSGSSVFLQSFCASTDSQDYQTCASHQTSKCSSGPELNETPRSANSTLC
GELSDTHATLPAAALGLDGSTDAYMPRGEGLAGWDRFAEMWRQLSSHVSMAEAFGSPPAS
CNLETLAEGGDRRRHVVSGDASPKRREAPSAPLNRSHSEGELTPAFDGLLLLPSFGSDPG
AAQEAPPPAQPGPRLPSLTSFAPCLTPQSSSSPVARFSLPPPANATARPPPXAPPPPPPR
PVHEEPPTRQQQAANQENSPHPVKPXSAAPPAEERRTEGRSVLEKLKSSIHPGRSSEQEA
DRKKQPVTEGAGSYYHLNHRELVAMLVEREAELERQKAEFERQKLALAKREVELRKLKPQ
VKDLEDYIDTLLVRIMEQKPTLLQVRSKLK
NT seq
4053 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgctaaccgtagaggaggaccagaaatggttccccacgcacgtgcaggtgacg
gtgctgcggggcaggggcgtgcggggcaagggcaagcacggcaccagcgacgtgtacacc
atcatccagctggggagggagaagtactccacctgcgtggcggagaagaccaccgagccg
gagtggagggaggagtgctccttcgagctgcagcccggcgtgctggagaccggctgcccg
gccggaagcaacgagctggtcctcgtcgaagaacaacagggagtcgatgggaccggaagt
gttcttggggacaggcggtgatccagctggccaagctcttcacaggagagcagggtcgtg
aaaaatgagtggtacaaactcaactccaagacggggaagaaggagaaggagcgaggagac
atccaggtcacggtgcagttcacccgcaacaacctgacggccagcatgtacgacctcgtc
atgaaggacaagggcgcctccaccttcggcaagctgaaggagcgcatcaagggcaagaag
aggtgcagcgaggaggactcggcgccggccgccctgccgagcggctacggctccctcgtg
cggatgcggcagcggttgccgagcgacggcggcggggaggaggactacgaggacgacgag
gggggcgaggcccggcggagcaagatgaggaccttcttcctgagggggaagctgaggaag
tcgtcggacactcgctccagcacgtcgctgggctcggagagcagcgagtcgtcgtcgcgc
ggcggcagcctgagccccacggccggcatcagcgtggtggtctccgacctctccaactcg
cccagcaacagcagcaacctgacggcggacaacagcccagatcacaccaagtcgtcctct
ctcatatgcgagttcggcgacgacgacgacggggagatcaccatcgcggtgccccggccc
gccgccaacggacgcctccctcgcggcgtccggcccacggacccggggaaacccgcggcc
ccttcgggcctggcgccgctgcagaggtctctgccgctctccgtgtctctgcagaacctg
cggccttccacggacctcctcaagagccccgcgggcgacgggcgccgctggtctttcgac
aagccctgcgaagaggagaaggcggccatagcggcggccctggagcagagcgggcccatg
ctaggagacgaggaggaggaggaggaggaggagggggggcagtttgctccgcccggatcg
gcctcctcctccagggtggagtcggggaagaagccgaggagcgacatgtttacccagcga
caggatgagtcccaacaggcaggcgagcagaaacacaagggctggtttggatcaaaagac
tcgcacgccaaacccagcctggtggtgtcacctaaactagagcccagcactgacccccgc
ccaccacccagccccccgggtgcccccgtagaccccgcccctctggtttcccccctccat
cacactaaccctttctcccactcacaggccgcagcgcctcccatatcgccccgcaacccc
ttcttctctctcctccagcacaaccctttctatggcgccacgctaaccgctcagccccta
aagcctccgctgcctcctctgccccatctctccagcgcccggccccccatagcgcaactc
tttccgcagacgcgcgccgacccgcccgcggaggccgccgccgccgcgatggacgaagcc
ggggaacgaccccttgaaggggaggtgccggcgagcgtgaagctgcccggcgcctctgcg
cgtgccggggaggtggacccggactctgagtgggacgaatgcttcgacgccttcgcggcc
ggccggctgcagtctcctgaggatccgaccgccggcaaaacgcagcggagcgatgctctg
aacgccgacgacggcgcatcactacccgcaacggaggcaaacgccaacgaagcactacgc
cgccgaccttccacggggtcggcgcccgatgcacaaagagccgtgttccaggtgaccggc
acgtatcattctgacacgtttgcacaattcctcgagacgatcccggagcacgagagcttt
gacagcgacaacgtcccgctaagtaactcaccagatgcttggctccaagctaatcaagct
aacagtgctactaacgatctaaaccacactaatgcgcatcgggccccctccggccccccg
tttgtagagctcagcagcagctccccggatcccggttcttctggtatcggcagttcagaa
gcagaagaggaattcgtctcctgcccgtcgtcgttttcagacaaattctgtgcgtcctcc
tccgaggaagccgaggtacgactcgttgacagcgacatcctccgctttgagcgatcctct
gacccgtcggtcgtaaggccctcggaatcggaggacgacccaaacgaccggtccgccgat
ctgtccgcagccgacgtgggtcagcgcaccgtcattcagcacggcgagtcctctgaatcg
tcaccggcaccgcagaccccaccgcttacgcctcagcagcacgagatcaacgccgctcct
ccgtcaccaaacctctccggcgccgagcggcttccggagctgcagccgaagtccaaagaa
ccttcacagttcaccgctgaattagacggatctgctcaggatttctttgatacctttgcg
ccggtcagcgacaccgcgggcgtgatgacgttcacgactccagagggtacgctggcacac
ccctcgctgcgtatcataacctcctcgcctgaggccagcctgcgctccccgaacccattc
ggctttgtgggcgatctcctcaacgccagtaacatggcgagcggccccggccgagacttg
ggcggcgcctcgctggccgcgcgggcgtctgatcagagcggcagcagcgtgtttctgcaa
agtttctgtgccagcacggactcgcaggactaccaaacctgcgcgtctcaccagacctca
aagtgctccagcggcccggagctgaacgagacgccgcgctcggccaactcgacgctctgt
ggcgagctgagcgacacgcacgcgaccttgccggccgccgctttgggcctagacggttcc
accgatgcgtacatgccacgtggcgaaggacttgccggatgggatcgattcgcggagatg
tggcggcaactctcgagccatgtttcgatggcggaggccttcggttcccccccggcgagc
tgtaacctggagacgctcgccgagggaggcgacagaagacggcacgtcgtctcaggcgac
gcgtcgccgaagcgccgcgaggcaccgagcgctccgctgaaccgctcgcattctgaaggc
gaactcacacccgcctttgacggactcctcctgctgccgtccttcgggagcgaccccggc
gcggcacaggaggccccgcccccagctcagcccggcccccgcctcccctcgctgacctcc
tttgctccctgtctaactcctcaaagcagtagctcccctgtcgcgcgcttttccctccct
ccccccgccaacgccacggcgaggccgccgcccngcgcaccgccgccgccgccgccaagg
ccagtacacgaggagccgccgactcggcagcagcaggcagccaatcaggagaacagcccc
cacccggtgaagcccntgagcgccgccccgccggccgaggagaggcggaccgaaggccgg
tcggtgctggagaagctgaagtccagcatccacccggggaggagcagcgagcaggaggcg
gacaggaagaagcagcccgtgacggagggagcgggctcgtactaccacctcaaccaccgg
gagctggtcgccatgctggtggagcgggaggcggagctggagcggcagaaggcggagttc
gagcgccagaagctggcgctggccaagcgggaggtggagctgaggaagctgaagccgcag
gtcaaagacctggaggactacatcgacacgctgctggtgcgcatcatggagcagaagccc
accctcctgcaagtgcgctccaagttaaagtga
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