Gasterosteus aculeatus (three-spined stickleback): 120833095
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Entry
120833095 CDS
T07457
Symbol
lingo2b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2b
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120833095 (lingo2b)
Membrane trafficking [BR:
gat04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
120833095 (lingo2b)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
LRR_4
Ig_3
LRR_5
Ig_2
ig
LRR_14
V-set
LRR_9
LRR_Zer-1
LRR_EndoS
LRRNT
C2-set_3
Motif
Other DBs
NCBI-GeneID:
120833095
NCBI-ProteinID:
XP_040055869
UniProt:
A0AAQ4PRN5
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All DBs
Position
XV:2027267..2051089
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AA seq
612 aa
AA seq
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MRHAALNHCHLFLGGALLLLLASPTLSCPARCECSAQSKSVSCHRKRLPTIPEGIPIETR
VLDLSKNKLRIITPDNFSSFLQLEDLDLSDNLISVVEPGSFRSQLALRSLNFRSNLLQLV
PAGVLSGLTNLTRLELGHNRLVVLLDHAFQDLRRLTSLKVGDNELVFISQRAFTGLLGLQ
SLTLERSNLTVVPTDALTHLHSLVELRMRYLSISFLKPFSFKRLSRLRRLEIDYWPWLET
LPPFSLHGLNLTSLVITNTNLSAFPGAALSSLPYLTHLNLSYSRIKHIHQGDLGQLPHLL
ELHLQGARLISIEPFAFSGLRSLQLLDVSRNRLDSLESGVFASPGALQRLCLGGNPLVCD
CRLLWLLNSHKPSALQILDVQPECSAPEHLLGKPLRDLKEPLVSRYMICTKPRIGPNTTQ
LLMADEGQPARLSCTAEGAPRPSVVWVTPHRSHITTKSSGRMEVRPDGTLEIKEAELHDS
GVYLCVASNPAGNASLSASLAVKGLGLGDRSHFSNRSSNYLTDSNSTWGNGTVLYNMTVP
IDLKTIIISTAMGCLSFLGVVIFCFLLLFVWSRGKGRHKSNFDIEYVPRKSNGAAADVAE
TSGPRRVNMKMI
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgcgacacgcagccctgaaccactgccacctcttcctgggcggggccttgctgcttctc
ctggccagcccgaccctgagctgccccgcccgctgcgagtgctccgcccagagcaagtcg
gtcagctgccaccgcaagcgcctgcccaccatcccggagggcatccccattgagacgcgc
gtcctggacctcagcaagaacaagctgcggatcatcacgccggacaacttctcctccttc
ctgcagctggaggacctggacctgagcgacaacctcatcagcgtggtggagcccggctcc
ttccgctctcagcttgctctgcgctcgctcaactttcgcagcaacctgcttcagctggtt
cccgccggcgtgctgtcgggcctgaccaacctcacccgcctcgaactgggacacaaccga
ctggtggttcttttggaccatgccttccaagacctgcgcaggttgacgtccctcaaggtg
ggcgacaatgagctggttttcatctctcagcgagccttcactggattacttggactccaa
agtctcacgctggaacgttccaatctgaccgtggttcccactgacgctctgacgcacctg
cacagcctggtcgagctgcgcatgcgctacttgagcatcagctttctaaaacctttctcc
ttcaagaggttatcacgtctccgccgactggagattgattactggccctggctggagacg
ctgccccccttctccctgcacggcctcaacctcacgtcgttggtcatcaccaacaccaac
ctgtcggccttccccggcgccgccctgagcagcctgccctacctcacgcatctcaacttg
tcctacagccgcatcaagcacatacatcagggcgacctgggccaactgccccacctgctg
gagctccacctccaaggggctcgtctgatttccatcgagccctttgcattctcgggcctc
aggtctttgcagctgctggacgtgtcgcggaaccgcctggactccctggagagcggcgtg
ttcgcctcgccgggcgccctccagaggctctgtctgggcggtaacccattagtgtgcgac
tgcaggttgctctggctgctcaatagccacaagccctccgctctgcagattctggacgtg
cagccagagtgcagcgccccggagcacctcctggggaaaccactgcgtgacctcaaggag
cctctggtctccagatacatgatctgcaccaagccccggatcggacccaacacgacgcag
ctgctgatggccgacgagggtcagccggcccgcctgagctgcacggcggagggagcgccc
cggccctcggtggtgtgggtcacgcctcacagaagccacatcacgaccaagagcagcggc
aggatggaagtccggccggatgggaccctggagatcaaggaggcggagctgcatgacagc
ggcgtgtacttgtgcgttgccagtaacccggctggaaacgccagcctgtcggcctctcta
gctgtgaagggcctgggcctcggcgacagatctcacttcagcaacaggagctcaaactat
ctgacagactccaacagcacgtggggcaatgggacggtactgtacaacatgacagtcccc
atagaccttaagaccatcatcatatctacagcaatgggctgcctgtccttcctcggcgtg
gtgatcttctgcttcctgctgctgttcgtgtggagccgggggaaaggacgccacaagagc
aactttgacatcgagtacgtccctcgcaagtccaacggcgcggcggcagacgtggcggaa
acgagcggcccgcggcgggtgaacatgaagatgatttga
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