Gasterosteus aculeatus (three-spined stickleback): 120833156
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Entry
120833156 CDS
T07457
Symbol
rtn1a
Name
(RefSeq) reticulon-1a isoform X1
KO
K20721
reticulon-1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120833156 (rtn1a)
03036 Chromosome and associated proteins [BR:
gat03036
]
120833156 (rtn1a)
Membrane trafficking [BR:
gat04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
120833156 (rtn1a)
Chromosome and associated proteins [BR:
gat03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
120833156 (rtn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Reticulon
RHD_RETREG1-3
DUF4736
Motif
Other DBs
NCBI-GeneID:
120833156
NCBI-ProteinID:
XP_040055969
LinkDB
All DBs
Position
XV:complement(5920887..5938615)
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AA seq
718 aa
AA seq
DB search
MSGQPGEELGSEGKWFGDDYEQNGLFGNTPTRFGELREEFKPRGGEVAGDLHQRFHPSPD
DGKRPPVAMGTASTDDLMSGPLRTPMNEDGDVYTSLMSNQSYASGREASYLSDDLKPTKP
PSGSSALDQFSGDTYSFSSSTRMTSDLGDDMPTSLLGSDKTESYNYMDISHGDERQDHHN
PVDPGSAGHDSLGSYMEKNHGRDEEEDLGSALGSQSFPYVEEPSDEELSDYRSYRNLGGT
PQTASPVKITLTESHPQAAKSELPQHAPPVSVSERENVLSVGLQGVPTVTLSEPEDDSPA
STPNASPTQKEFRSHDMFKADAVKPAASKSSPGSKAGSREQDGSSAESGDSEIELVYEEP
PKAASNPFVQLPKSQGAPSQPNNPFDNPPVAKGGFGNHAPPTAYSILREEREAELDSDLF
IESASEESPKRAQGSGGPKRGVSPPSPLAPSAALPRSAPPPPAEPLITEKVKSPVRAEED
RTSKPKPPTAAVPPEVRLERPHQDDMHKHANEGKGEPAASIVLQGFDKQKAIDLLYWRNV
KQSGAVFSSVLLLLFSLTQFSVVSVGAYLALAALSASISFRIYKSVLQAVQKTDEGHPFK
AYLEVEIALSQDQISKYADKILLYTNTCMKELRRLFLVQDLIDSLKFAVLMWLLTYVGAL
FNGLTLLILAVVSMFSMPVVYEKHQAQIDQYVGLIRTHVNSVVGKIQAKIPGAKRKEE
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtcagcccggtgaggagctaggctcggaggggaagtggttcggggatgactac
gagcaaaacggcctgtttgggaacacaccgacccgcttcggcgagctccgtgaagaattc
aagccgagaggcggcgaggtggccggcgacctgcaccaacgatttcacccttccccggac
gacgggaaaaggcctcccgttgctatgggaactgcatctacagatgacctcatgtctggc
ccgttgaggacgcccatgaatgaagacggcgacgtctacacttccctgatgtcaaatcag
agctacgcgtccggtcgagaagcctcttacctgtctgatgacctgaaaccgactaagcct
ccctccggctcctccgccctagatcagttctctggcgacacctatagcttcagctccagc
accaggatgacctctgacctgggcgatgacatgcccacatctctgttgggctcagataag
acggaatcctacaactacatggacattagccacggggacgagcgccaggaccaccacaac
ccggtggatccaggctcagccggccacgactcattaggcagctacatggaaaagaaccac
ggaagagatgaggaggaagacctcgggtcagctctgggctcccaatcgttcccctatgtg
gaggagccatctgatgaagagctgtcggactaccgctcctaccgaaaccttggtggcacc
ccacagacggccagcccggtgaagatcactttgaccgagtcccatcctcaggctgccaag
agtgagctgccgcaacacgcccccccggtcagtgtgtctgagcgtgaaaacgtcctcagc
gtgggcctgcagggggttcccactgtgacgctatcggagccggaggacgacagccctgct
tccactcccaatgcttcgccaacacaaaaagaattccgttcccatgacatgttcaaggcg
gacgcggtgaagccggcggcttccaaaagcagcccgggctcaaaggcgggcagcagggag
caggacggcagcagcgctgagtccggagactccgagattgagttggtgtacgaggagcct
cccaaggccgctagcaacccatttgtccagctgcctaaaagccagggcgctcccagccag
cctaacaacccctttgacaatccccccgtcgccaagggtggtttcggtaaccacgctcca
cccacagcctacagcattctgagagaggagagagaggcagagctcgacagtgatctcttc
atcgagtctgcgtccgaagagagcccgaagagagcgcagggctccggtggccccaaacgg
ggggtgagccctccctctccgctggctcccagcgccgcccttccccgaagcgcgccgccg
ccgccggcagagcccctgatcacagagaaggtcaagagcccggtgagagcggaggaggat
cggaccagcaagcccaaaccgcccactgccgccgtgcccccagaggtgcgactggagagg
ccccaccaggacgacatgcacaagcacgccaatgagggcaaaggagagccggccgcctca
atcgtcctgcagggctttgataaacaaaaagccattgacctgctctactggaggaacgtg
aagcagtccggggccgtgttcagcagcgtgctcctgcttctcttctcgctgacccagttc
agcgtggtcagcgtcggcgcctacttggccctggcggccctctctgccagcatcagcttc
cggatctacaagtctgtgctgcaggctgtgcagaagaccgacgagggacaccctttcaag
gcctacttggaggtggaaattgctctatcccaggaccagatcagtaaatatgccgacaaa
atcctgctgtacaccaacacctgtatgaaggagctccgtaggctgttcctcgtacaagac
ctgatcgactccttgaagttcgccgtgttgatgtggctgctgacctacgtgggcgcgctc
ttcaacggcctgacactgctcatcctagccgtggtgtccatgttcagcatgcccgtggtc
tacgagaaacatcaggcacagatcgatcagtacgtgggactaatacggacccatgtcaac
tctgtggtggggaagatccaggcaaagatccccggggcaaagaggaaggaggagtag
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