Gasterosteus aculeatus (three-spined stickleback): 120833247
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Entry
120833247 CDS
T07457
Symbol
hcn4
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4
KO
K04957
hyperpolarization activated cyclic nucleotide-gated potassium channel 4
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gat04040
]
120833247 (hcn4)
Ion channels [BR:
gat04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
120833247 (hcn4)
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GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
RNase_H2-Ydr279
LPD1
Motif
Other DBs
NCBI-GeneID:
120833247
NCBI-ProteinID:
XP_040056104
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All DBs
Position
II:16868579..16920211
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AA seq
1445 aa
AA seq
DB search
MDRLHSSMRKRLYSLPQHIGQRASIMGEDEDADKDTRRKSLRMKPLPSPMPTSGGSCKGI
GETKSGESVIMETDMGRPMKTSSNGDCRRFRGSLSSITSRHVHDSDAAEQRRLITEGDVT
PSEESPPGAIGDGPSDQGAQGASGGVGAQKDSADQEAGFIKLDGIDQILPDDERLYQAGF
IHRQFGAMLQPGVNKFSLRMFGSEKAVEREQERVKSAGFWIIHPYSDFRFYWDLTMLLLM
VGNLIIIPVGITFFKDEHTPPWIVFNVVSDTFFLMDLVLNFRTGIVKEDNTEITLDPQQI
KIKYLRSWFVVDFISSIPVDYIFLIVETRIDSDFYKTARALRIVRFTKILSLLRLLRLSR
LIRYIHQWEEIFHMTYDLASAMVRIVNLIGMMLLLCHWDGCLQFLVPMLQDFPADCWVSK
NKMVNDTWGQQYSYALFKAMSHMLCIGYGMYPPVGMTDVWLTILSMIVGATCYAMFVGHA
TALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADMRQRIHDYYEHRYQGKMFDEDSILGEL
NEPLREEIVNFNCRKLVASMPLFANADPNFVTSMLTKLRFEVFQPGDYIIREGTIGKKMY
FIQHGVVSVLTKGSKETKLSDGCYFGEICLLTRGRRTASVRADTYCRLYSLSVDNFNEVL
EEYPMMRRAFETVALDRLDRIGKKNSILQHKVQHDLSSGGLNYHESEIIQQIVQHDRDMA
HCAHLLQNAPSQTPPSPTPVIWAPLIQAPLQAAAATTSVAIALTHHPHLPQTLFRPPVSV
LGSLKDPPSRLKKFPTFVSPSPGPGSVGDSPSNTSSELGTGVDMPLLASFRALHMTSGTG
PIGSSQQASGSGVQRGPSGTGFGSSGRQASAFPFGPYSSSGSPSSSTAQLHPQPQHQQPF
RSSTPPLSNLFNQGSTGGSTGSGISGAAVGACGAATGWSSSGAVGDFGEGAIGGDTAWAG
EDFTFGMTGQLPDAHFGSGGTTGGAVAEISGDSIRGKSEGAAAVACVRLAGGASGGSAVG
ITCGSIGETARKSMGGTSRGSMRRASGGSVGGALGESLLGLFGKPSAGSIGVVSGGFTGG
PSGGPLGGASDGSMVGNPAGLLGTVSDGSTTSYLGGVSGPGGAMIGGHIGKASVGAVGSH
IGGAAACPIGGTSVGTSAGLLGSSCCQSPISTASSSPMPGQLLHSQPSPKLPQVAPFQQF
AGGGRTTSGLNLFHSPQHGSPSSSRGQHSQQPAEGSPSSLNHFSLAALQSGLMPHHMSLE
RSALASLAQYGSANASPCLTPVAPSPTIQSPVAGRTFFHSDHSSATGSHSCPLMSQSSLP
SQLRSPPHATERVSPLGHFSEDSKLSSSSHPSLPQEVAQALGHRTACSFVDTGYYPSPFS
SPTLVPKPCSSVPGHMTPPTHLSPGHPHQIQSTGASPASPLQRASAAYSSDLEPQTVRSK
LPSNL
NT seq
4338 nt
NT seq
+upstream
nt +downstream
nt
atggacaggttacactcctccatgcgtaaaaggctctacagtttgccacagcacatcgga
cagagagcatccataatgggcgaagatgaagacgcagacaaggacacccggaggaagagt
cttaggatgaagcctttgccgtcaccgatgccgacctctgggggaagctgcaaaggcatc
ggggagaccaaaagtggggagtctgtgatcatggagacggacatggggagaccgatgaag
accagctcaaatggagactgtcggagatttcgaggcagcctctcgtccatcacaagtcgc
catgtgcacgactccgacgcggcggagcagaggcgcttgatcaccgagggggatgtcacc
ccgagcgaggagagcccccccggggccatcggcgatggcccgtcggatcaaggcgcgcaa
ggggccagcggcggcgttggcgcccaaaaagactccgcggaccaggaagcagggtttata
aagttggatggcattgatcaaatcctgccggacgacgagagattatatcaagcagggttc
atacaccgacagtttggagcaatgctccaacccggggtcaacaagttctccctgaggatg
tttggaagtgagaaggcggtcgaacgggaacaagagcgggttaaatccgcaggattttgg
ataattcacccgtacagtgatttcaggttttactgggacttgaccatgctgctgctgatg
gtgggcaacctcatcatcatccccgtgggcatcacgttcttcaaggatgagcacacgccc
ccctggatcgtgttcaacgtggtctccgataccttcttcctcatggatctggtcctcaat
ttcaggactggcatcgtcaaagaggacaacacggagatcactctggatccacaacagatc
aagataaagtacttgcggagttggtttgtggtggatttcatctcctccatccccgtggac
tacatcttcctcatcgtggagacgcgcattgattcggatttctacaagacagcacgtgcc
ttgcggattgtccgcttcacaaagattctcagcttgctgcgactcctgcgcctctccaga
ctcatccgctacatccaccagtgggaagagatcttccacatgacctatgacctagccagc
gccatggtgaggatagtcaacctgatcggcatgatgctgctgctgtgccactgggacggc
tgcctgcagttcctggtgcccatgctgcaagacttccccgccgactgttgggtgtccaaa
aataagatggtgaacgacacgtggggacagcagtactcctacgcacttttcaaagctatg
agccacatgctgtgtattggctacggcatgtaccccccagtgggcatgacagacgtgtgg
ctgaccatcctcagcatgatcgtgggtgctacctgctacgccatgttcgtgggccacgcc
acggcgctgatccaatccctggactcgtcccgacggcagtaccaggagaagtacaaacag
gtggagcagtacatgtccttccacaagctgccagcggatatgaggcagagaatccacgac
tactacgagcatcgttaccagggcaagatgttcgatgaggacagcatcctgggagagctg
aacgagccgctgcgagaggaaatcgtcaactttaactgtcgaaagctggtggcgtccatg
cctctgtttgccaacgccgaccccaactttgtcacttccatgctcaccaagctgaggttt
gaggtgttccagcctggggattacatcatcagggaaggaaccatcggcaaaaagatgtac
ttcatacagcacggggttgtcagcgtgctaaccaaaggcagtaaagagaccaagctgtca
gatggctgctactttggagagatttgcttgctgacacgaggccgaaggacagccagcgtc
cgagcagacacatactgtcgcctgtactctctgtctgtggacaacttcaatgaggtgctg
gaggagtatcccatgatgagaagggcatttgagactgttgccctggacaggctggaccgc
atcggcaagaaaaactccatactgcagcacaaggtacaacatgacctaagctcaggtgga
ctcaactaccacgagagtgagatcattcagcagattgtgcagcatgacagggatatggcc
cactgtgcccacctcttgcagaatgccccatcccagacgcctccttcacccacccctgta
atctgggcccccctcatccaggcccctctacaggcagcagctgccaccacctcagtagcc
attgccctgacacaccatcctcaccttccacaaactcttttcaggcccccagtttctgtt
ctggggtccttaaaggacccacccagccggcttaagaagttccccacatttgtttctcca
tccccaggacctggttctgttggggactcaccctctaacacatcctctgaactggggact
ggggtggacatgccattgctggcctcttttcgggcccttcacatgacgtcaggtacaggg
ccaattggctcgagccaacaggcctcaggtagcggggtccagcgtggacctagtgggact
ggttttgggtccagtggaagacaggcctctgccttccccttcggaccatactcttcctct
ggttcaccctcgtctagcacggcccaattacacccacaaccacagcatcaacaaccattc
cgctccagtactccacctctctcgaaccttttcaaccaaggatccacaggtggaagcaca
gggtcaggaataagtggtgcagcagttggagcatgtggtgctgctacaggttggtcttcg
agtggagcagttggagactttggggaaggagccataggaggagacacagcttgggctgga
gaggactttacatttggaatgacggggcaactgcctgatgcacactttgggtccggagga
actactggtggagcagtagccgagatctcaggggattcgattagagggaaatctgaagga
gcagcggctgttgcttgtgtcaggttagcgggtggggcatcagggggatcagcggttggt
attacctgcggttcaataggagaaacagccaggaaatcaatgggagggacttctagggga
tcaatgagaagagcttctgggggatcagtgggaggggctttgggggagtcactactagga
ttgttcggaaagccttctgctggatcaataggagtggtttccgggggatttactggaggg
ccttctgggggaccacttggaggggcgtctgacggttcaatggtaggtaatcccgcagga
ttgttgggaacggtttcagatggatccacaactagctatttaggaggtgtgagtgggcca
gggggagcaatgattggaggacatataggcaaagcatcagtaggagctgtagggagccat
ataggtggtgctgcagcttgtcccataggagggacttctgttggaacttcggctggactt
cttggttcctcctgttgtcagagtcctatatctaccgcctcatcaagtcctatgcctggt
caactgctacatagtcagccatcacccaagctgcctcaggtagccccttttcagcagttt
gctgggggaggcaggactaccagtggcttaaacctcttccattctcctcaacatggctcc
ccgtcctctagcagaggacagcacagccagcagcctgctgagggctccccgtcctccctc
aaccattttagcctggcagccctccagtctggcttaatgcctcaccatatgtccctagag
aggtccgcgctggcctccctggcacagtatggttcagcaaacgcctccccctgccttacc
ccagtagcgcctagccccactattcaaagcccagtggccggcaggactttcttccatagt
gaccactcaagtgccacaggatcccacagttgtccactcatgtctcagtcctctctccct
tcacagcttcgcagcccgccacacgcgacagagagagtttctccacttggccacttttct
gaggacagtaagctttcatccagctcgcacccttctctgccccaagaggtagcccaggcc
ttaggccaccgtactgcctgctcctttgtggacactggatattacccctcacccttctcc
tcgcccactcttgttcctaaaccctgtagctcagtgccaggacacatgactcctccaacc
catctgtctccggggcaccctcaccagatacagtccactggggcctccccggcctcgcct
ctacagagggcctctgcagcctactcatcagatctagaacctcaaacggtccgctctaaa
ctcccttccaacttgtga
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