Gasterosteus aculeatus (three-spined stickleback): 120833261
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Entry
120833261 CDS
T07457
Symbol
stxbp5b
Name
(RefSeq) syntaxin-binding protein 5 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120833261 (stxbp5b)
Membrane trafficking [BR:
gat04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
120833261 (stxbp5b)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
120833261 (stxbp5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_HPS5
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Lgl_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_NUP159_NUP214
EIF3I
Beta-prop_VPS8
Synaptobrevin
Beta-prop_Vps41
RAB3GAP2_N
WD40_like
Motif
Other DBs
NCBI-GeneID:
120833261
NCBI-ProteinID:
XP_040056141
LinkDB
All DBs
Position
XV:11678422..11702807
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AA seq
1194 aa
AA seq
DB search
MKKFNIRKVLDGLTAASSSSSAAAASGAAQPGAPRENDAVQETLQSEHFQLCKTVRHGFP
YQPSSMAFDPVQKILAVGTQTGALRLFGRAGVECFCQHESGAAVIQLQFLINEGALVSAL
ADDSIHMWNLRQKIPAILHSLKFNRERITYCHLPFQSKWLYIGTERGNIHIVNVESFTLS
GYVIMWNKAIELSTKTHPGPVVHISDNPMDEGKLLIGFECGIVVLWDLKSKKADCRYNYD
EAIHSVAWHHEGKQFVCSHSDGTLTTWNIRVPAKSAQIITPHGKQPKDGKKPEPCKPILK
VEYKTTRAGDPFMVLSGGLSYDTVGRRACLTVMHGKSTAVLEMDYPIVDFLTLCETPYPN
DFQEPYAVMVLLEKDLVLIDLGQIGYPIFENPYPLTIHESPVTCCEYFVDCPAELIPALY
SVGSRQKRQGYSKKEWPISGGNWGQGTQSYPEIIITGHADGSIKFWDASALMLQVLYKLK
TAKVFEKARSKEEKANTDIVEEDPFAIQTMSWCPESRMLCVAGVSAHVLIYRFSKQEVTT
EVVQLLEVRMQSEFSNGDSPDPGGEQTPTLPNPGASPSPQESEPPSQPSTGSNSSDGPRD
NIACLQVRSSPLKQSPGYQVELVIQLVWVSGEPPQPITSLAINSSYGLVVFGNSNGLAVV
DYLQKTLLLNMGTSELYSPSDPYHRQPRSPRKVRQSSGATCDSNDGSNTSEDRCKSPTSG
STSPCNSDDERKQRFIEKVKFKSRRFSKTVANDFAKMSRKISSSSEPKTDLAKERSKQWH
SFTRKKHSCCLGRGQAAARMTPKGPVCRTESAPNFYAKDNTFTRSRSSSVTSIDRESRES
ISAFHFCESYPRKMDGAVGPCLLVGTTQGTVVMVALSLPPAVDQRLQQPVGISSCGTMVT
LKGGILTMALLDATGALLPPSFESWYDPNASDEEKEKSRRRRPASPPSSQEGPEAQFAVL
CSEKQAKVLAMPSQTRVYKHNITESSFVLRADVVQMAGAYCIACFCANGHIMTLSLPSLR
PLLDVNYLPLTDMRIARTFCFSNLGQALYLTSPTEIQRITYSQETCDNRQEMLSELFTPV
ETPEAPNRGFFKGLFGGGAQSLDREDLFGETGAGKASRSLAQHIPGPAGMEGMKCAASGV
VGDLARARIALDERGQKLGELEDRTAAMMASADSFSKHAHDMMLKYKDKKWYQL
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttaacattagaaaggtgctggacggcttgacagcggcttcctcctcctcc
tccgccgccgccgcctccggggcagcccagccgggtgctccccgggagaacgatgccgtc
caggagactctccagtcggagcatttccagctttgcaagactgtgcgtcatggcttccca
taccagccatcctcgatggcttttgaccccgtccagaagatcttggccgtcgggactcag
accggagctttgaggctcttcggccgtgcgggtgtggagtgcttctgtcagcatgagagc
ggtgcggctgtcatccagctgcagttcctgatcaacgagggggcgctggtgagtgcctta
gccgacgacagcatccacatgtggaacctgaggcaaaaaatccctgcaatcctgcattct
ctcaagttcaaccgggagagaatcacatactgccacctgcccttccagagcaaatggctc
tacatcggcacagaaagaggaaacatccacattgtcaacgtggagtccttcactctctcg
ggctacgtcatcatgtggaacaaagcaatcgagctatccaccaagacacacccagggcct
gttgtgcacatcagtgataaccccatggatgaaggaaagcttctgattggattcgagtgt
gggattgtggtgttgtgggatttgaagtccaaaaaagcggactgccgctacaattatgac
gaggcgatccactcggtagcctggcaccatgagggcaaacagtttgtctgcagccactct
gatggcacgctgaccacgtggaacatacgagtcccagccaagtctgcacagatcatcaca
ccacatggaaagcagcctaaggatggaaaaaagccagagccgtgcaagccgatcctgaag
gtggagtacaaaacaacaagggctggggacccgttcatggtcctgtctggaggtctgtcc
tacgacacggtggggaggagagcctgtctgactgtgatgcatggaaagagcactgccgtg
ctggagatggactaccccatcgtggacttcctgacgctgtgtgaaactccttatccgaac
gactttcaggagccgtatgctgtgatggtcctcctcgagaaggatttagttttaatagac
ctcggacagattgggtacccgatatttgagaatccatatcctctgactatccacgagtca
ccggtgacctgctgtgaatacttcgttgactgccctgctgaactcattcctgcactttac
tcagtcggcagccggcaaaagagacaaggttacagcaagaaggaatggcccattagtgga
ggaaactggggtcaaggcactcagagttacccagagatcataatcactggacatgcagat
gggtcgatcaaattttgggatgcttccgcattaatgctccaggtgctctacaagctgaag
actgccaaggtttttgagaaggctcgcagtaaggaggagaaggccaacaccgacatagta
gaggaggacccgtttgccatccagaccatgtcctggtgccctgagagcaggatgctctgt
gtcgccggggtgtccgcccacgttctcatctatcggttcagcaaacaagaagtcaccact
gaagttgtgcagcttttggaggtgcggatgcagagcgagtttagcaatggggactcccct
gatccgggaggagagcagacccccaccctgcccaacccgggagcttcccccagccctcag
gagagtgagccccccagccagccctccacaggaagcaactcctccgacggacccagggac
aatatcgcatgcctgcaggtgcgaagctccccgctgaagcagtctccgggctaccaggtg
gagctggtgatccagctggtgtgggtgagcggggagcctcctcagccaatcaccagcctg
gctatcaactcctcctacggcctcgtggtgtttgggaacagtaacggtctggccgtggtc
gactatctccagaaaactctactgctcaacatgggcacgtcggagctgtacagcccctca
gacccctaccacaggcagcctcgctcgccacgcaaagtgcgccagtcctccggagcgacc
tgtgattcgaacgacgggtccaacacctcagaggaccgctgcaaatctcccacttcagga
tctacttcaccttgcaattctgatgatgaacgaaaacagcggttcatagagaaggtgaag
ttcaaaagcagacgcttttccaagacggttgccaatgactttgccaagatgtcacggaaa
attagctcgtctagcgagccaaagacagacctggcaaaggagaggtccaaacaatggcac
tctttcacgcgtaagaagcacagttgctgcctgggccgaggccaggcggcagcccggatg
acccccaagggccccgtctgtagaaccgaatcggcccccaacttctatgccaaggataac
acattcacccgctcacgtagttcaagtgtgaccagcatagatagagaatctcgagagtcc
atctccgcctttcacttctgtgagagttaccccaggaagatggacggcgcggtgggcccc
tgtctgctggtgggcaccacccagggcactgtggtgatggtggccctcagcctcccgccc
gctgtggaccagaggctgcagcaacccgtcggcatctcctcttgtggcactatggtcaca
ctcaaaggaggcattttgaccatggccctgttggacgccactggagctctgctgccccct
tcctttgagtcttggtacgacccaaatgcttccgacgaggagaaggagaagagccggagg
cgcaggccggcatcccctccctcgtcccaggagggtccggaggcccagttcgccgttctg
tgttcggagaagcaggccaaggtgttggccatgccctcccaaacccgcgtctacaaacac
aacatcacagagtcctccttcgtgctgagggccgacgtcgtgcagatggccggggcgtac
tgcatcgcctgtttctgtgccaacgggcacatcatgactctgagtttgcccagtctacgg
cctctgctggacgtgaactacctgccgctgacggatatgcggatagccagaacgttctgc
ttctccaacctgggtcaggccctgtacctcacctcgcccactgagatccagaggatcact
tacagccaggagacctgcgacaatcgacaggagatgctcagtgagttatttacccctgtg
gagacaccagaggctcctaacagaggtttcttcaaaggcctgtttgggggcggagctcag
tctctggacagagaggacctctttggggaaaccggtgctggtaaggcctcccgtagcctg
gcccagcacatacctggcccggcgggcatggagggaatgaagtgtgcagcgtctggcgtt
gttggagatctggctcgtgcacggatagctctggatgagagagggcagaaactgggggag
ctggaagacagaacggccgccatgatggccagcgcagattcgttttccaaacatgctcat
gacatgatgctgaagtacaaagataagaagtggtaccagctctga
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integrated database retrieval system
