Gasterosteus aculeatus (three-spined stickleback): 120833423
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Entry
120833423 CDS
T07457
Symbol
ddx21
Name
(RefSeq) nucleolar RNA helicase 2
KO
K16911
ATP-dependent RNA helicase DDX21 [EC:
5.6.2.7
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gat03009
]
120833423 (ddx21)
03036 Chromosome and associated proteins [BR:
gat03036
]
120833423 (ddx21)
Enzymes [BR:
gat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120833423 (ddx21)
Ribosome biogenesis [BR:
gat03009
]
Eukaryotic type
Pre-60S particles
Helicases
120833423 (ddx21)
Chromosome and associated proteins [BR:
gat03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
120833423 (ddx21)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
GUCT
Helicase_C
ResIII
CMS1
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
120833423
NCBI-ProteinID:
XP_040056454
UniProt:
A0AAQ4QZ83
LinkDB
All DBs
Position
II:complement(13747946..13755025)
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AA seq
749 aa
AA seq
DB search
MQTKIMLETEDQAMDDNLDAAAEAKRLKKKNKEAKKLKNQQNLEEQEEQQDLDCEPPAPK
KKKRKDSLPVDQVNDHIEEDTHMNDITADTPEKIKKKAEGDSEKKKKKNKKAEVETNGHS
IPDTPAPTPVQSSEDSASDSEKETGETPEQKEGAFSNFRISQFTIDKLKARGATYLFDIQ
VKTFNPVYDGEDVIAQARTGTGKTFSFAIPLVEKLQTDAVALTRGRAPKVLVLTPTRELA
IQVAKDFKDITRKLSLACFYGGSSYNPQLDAIRNGIDILVGTPGRVKDHLQNNKLDLSKL
KHVVLDEVDTMLDMGFADQVEEILSTSYAKDSDSNPQTLLFSATCPPWVYEVAKKYMRPQ
CKHVDLIGKKTQKAATTVEHLAITCHWSQRAAVIGDVIQVYSGSHSRTIVFCETKKDANE
LSMNTSIKQSAQTLHGDIPQKQREITLKGFRNGTFEVLVATNVAARGLDIPEVDLVIQCS
PPKDVESYIHRSGRTGRAGRAGVCICFYQRKEEDQLRYVENKAGITFRRVGVPTANDIIK
SSSKDAVRFLDSVPITAVAYFRESAEKLIGERGAVDALAAALAHISGATSLEQRSLLNSD
VGFTTMQMVCSQEMHNMGYAWKSIKEQLGEEFESHIQRMNYLKGKMGVCFDVSAGKVKEM
MDGWTDGRRWQLTVATELPELEEKQFTNRGGGFGGGNRGGSRGGGFRGGRGRGFGGSGGR
SNGFRSGGFNNNSNVKGVHKRDFGEAFDY
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgcagacaaaaatcatgttagaaactgaagatcaagccatggatgacaacctggacgcc
gccgcggaggctaaacgcctaaagaaaaagaacaaagaggcgaagaagctgaaaaaccag
cagaacctggaggagcaggaagagcagcaggacctggactgtgaacctccagcaccaaag
aaaaaaaagagaaaagactctcttccagtggaccaagtcaacgaccacatcgaggaggac
acacacatgaacgacatcactgccgacacaccagagaagattaagaagaaggctgaagga
gactctgagaaaaaaaagaagaagaataagaaagccgaggttgaaacaaacggacattcc
atcccagacaccccggcacccacaccggtccagtccagtgaagactcggccagcgacagt
gaaaaagaaacgggggagacaccagagcagaaggaaggagccttctccaacttcaggatc
tcccaattcactattgataaactgaaagctcggggagccacttacctgtttgacattcag
gtgaagacattcaatcctgtttacgacggcgaggacgtcattgcccaagcccgaactgga
acaggaaagacgttctcatttgccatccccttggtggagaagctgcagacggatgcagtg
gcgttgaccagaggccgggctcccaaggtcttggtgttgactccaaccagagagttggca
atccaggtcgcaaaggacttcaaagacatcaccaggaagctttcactcgcctgtttctat
ggcggcagctcatacaacccacagcttgatgcaatccgtaatggtatcgatattttggtg
ggcacacccggccgcgtcaaagaccacctgcagaacaacaaactcgacctctccaaactg
aaacatgtggttctggatgaagttgacacgatgctggacatgggatttgcagatcaggtt
gaagagattttgtcgacatcatatgcgaaagattccgactccaacccacaaactcttctg
ttttcggccacctgccctccctgggtttacgaggtcgccaagaagtacatgagaccacag
tgcaaacacgtagatctgatcggcaagaaaacacagaaagctgcaacgacagtagaacat
ctggccatcacctgtcactggtcgcagcgtgcagctgtaatcggggatgtgatccaggtt
tacagcggcagccacagcaggaccatcgtgttctgtgaaaccaagaaagacgccaacgaa
ctttccatgaatacatccatcaaacagagtgcccagaccctccatggtgacattcctcag
aaacagagagagatcacgctgaagggcttcaggaacgggacctttgaggttctggttgcc
acaaacgttgcagcccgtggattagacatccctgaagtcgacctggtgatccagtgttct
ccaccaaaggatgtggagtcgtacatccatcgctcgggacgtacgggccgagccggcagg
gctggagtctgcatctgtttctaccagaggaaagaggaggaccagctgcgctacgtagaa
aacaaagcaggtatcacattcagacgagttggcgttcccactgcaaacgatatcatcaag
tcctcaagcaaggacgctgtcaggtttctggactctgttccgattacagctgtcgcgtac
ttccgagaatcagcggagaagctgatcggggagagaggagcagttgatgcactggccgcg
gccctggctcatatctctggagccacaagtctcgagcaaaggtcactgctcaactccgat
gttggtttcaccactatgcagatggtgtgttctcaggagatgcataatatgggttatgct
tggaaatccatcaaagagcagcttggagaagagtttgagtcccacattcagagaatgaac
tacctcaaaggcaaaatgggtgtttgttttgatgtctcagctggcaaagtcaaagagatg
atggacggctggacggacggtcgccgttggcaactgactgtagccacagagctcccggag
ctggaggagaagcagttcactaaccgcggaggaggcttcggtggcggaaaccgcggagga
agccgcggaggaggcttcagaggtggcagaggccgtggttttggaggaagcggtggccgt
agcaacgggtttcgcagcggtggctttaacaacaacagtaacgtcaaaggagtacacaaa
cgcgacttcggcgaagcatttgattattga
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