Gasterosteus aculeatus (three-spined stickleback): 120833579
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Entry
120833579 CDS
T07457
Symbol
aff3
Name
(RefSeq) AF4/FMR2 family member 3 isoform X1
KO
K15195
AF4/FMR2 family member 3
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gat03021
]
120833579 (aff3)
Transcription machinery [BR:
gat03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
120833579 (aff3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AFF4_CHD
AF-4
AF4_int
Motif
Other DBs
NCBI-GeneID:
120833579
NCBI-ProteinID:
XP_040056731
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All DBs
Position
XVI:7179643..7195753
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AA seq
1219 aa
AA seq
DB search
MPTVLAGKGKLSIVRFLLRCAHSQVTRSQHNSCAKEILEDMTQRASGGDQAQRSLYISKE
AKQPAAQLRQSRGDVQLRMTRHPRVAPHKSMLADDLKLSSDDDDTQRATRESASLEGHSL
SAQRAHTHGRRVRHSSSDSSCSSSSVESCSSSSSSSSSSSSLCSRSPGHSPDVHPDPASP
ANAQPPGNSKETDHPQWQLDEWLKKSRRKSSSGDQVHSVSGRPPSPHTQRAPSPARFWDS
NQEYSPSQSPIPSPQFNFSHNTSHLPSPGYSYCPSPSPFPSTCPSPGPSPGPSPIPSPVP
SVCPSPCGSLRASRSPSPIHRDPPRSPSPGLPTPSGVRHFPVVQRTQPNLTANPHRTKNR
SWITPLPDTDAKSKATSSIPLQPTHQHRPKTRPTQNQDQTKPKTSAVLNSNQSHGHKSRP
KLNFHPSSKQLSEAPKHTSHLEQIQNSRSNHSSNHKPRPSFQSSSHRSSKTSRHLIPTSC
ETKSDHISQSKSAANHNTGLSCRSNPSLKPRAKSSEGTAPTAVRVNHTVTTRKKPQSKEQ
EVDLRGDHLSQRGRENQRKEDRQHKKQQGKPERKEDRRLAEEQLLRRPWIHSSAEEEEEE
EGLIERQRRREEAARGENRRGRGQQLQCEWQTVLAKERLLTNTDQGRAKRAGRSEEEREL
QQDPSPPPSRSPTPHRPPTSPSVSSAPNSDSESEYQAPITKVPADSTSYKALPKRGRQSL
GRSGADRPKVVLPRGPTSAHPSEGQQKLYTLVPFGRGEQTTAPSQRGLRNLVVQIDLCLL
KRVPDSTTSSTLEKPSSSSSLSSTKDKQREAMKHLYVPETVSKDSKRKRKSENGVSHRES
KRSIPPAKDLSSQKEPAPHAVERNFVTETVHNGYLEEYLDNKRPLSPLSPLSDSPQSTKP
PLKTKTSEQLHAHVHKNRDRNRDSAIKPKMEGECVKVSRQPQPPSESWGAAGHRGAVPNS
ETAHHAEYYLHEAKRMKHRADAMVDKLGKAVNYVDAALSFMECGKAMEEGPLEAKSPYTM
YSETVELIRYAMRLKSHSGPGARQEDKQLAVLCFRCLALLYWQMFRLKKDHAFKYSKVLL
DYFKVHPKTGLTFQTSPKVPSTPPCWSDSGKGTGAPPSSLSPTAKHLGRGSHGGSAFSSL
ISIPQRIHQMAANHLNITNSVLYSYEYWEVADNLTMENKEFFNYLNTLSGPLTLHSSIAH
AVQYTRQALQWIRISAKLN
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgcctactgtgctcgcgggcaaagggaaactttccatcgtgcgttttctactcagatgc
gcgcattctcaggtaacaagaagccaacacaacagctgtgccaaagaaatcctcgaggac
atgacccagcgagcctcagggggtgaccaggcccagcgaagcctctacatctctaaggaa
gcaaaacaaccggctgcacaactaagacaaagtcggggggatgttcagctgcgaatgacc
cgtcaccctcgtgtggcacctcacaaatccatgctcgctgatgacctgaagctgagcagt
gatgatgacgacactcaaagggcaactcgtgagtcggcttccttggagggacacagcctg
tcagcacagcgagcgcacacacatggcaggcgagtgagacattccagctccgactcttcg
tgctcgagctccagcgttgagtcgtgcagcagcagcagcagcagcagcagcagcagcagc
agtctttgctcccggagccccggccacagcccagacgtccacccggatcccgcgtcgccc
gccaacgcgcagccaccgggcaacagcaaggagactgatcacccccagtggcagttggac
gaatggctgaagaaatcccggagaaaatcttccagcggtgaccaagtgcacagcgtttcg
ggacgtcctccctctccccacacccaaagagcgccgtctccagccaggttctgggacagc
aatcaggaatacagccccagccaaagccctatccccagcccacagttcaatttcagccac
aacaccagccacctacctagccctggttatagctactgccctagccccagcccgttcccc
agcacatgcccaagtcccggcccaagccccggacccagcccgatacccagtccagttcca
agtgtttgccccagtccgtgtgggagcctgagagccagccgtagccctagtcctatccat
agagaccctccaagaagccccagtcccggcctaccaactccttccggggttcggcacttc
ccagttgttcagagaacacaacctaacctgacagccaatccccacaggacgaaaaacagg
tcatggattaccccattgcctgatactgatgcaaagagcaaagccacaagcagcattcct
cttcaaccaactcaccaacaccggcccaagactcgacccacacagaaccaagaccaaacc
aaaccgaagacgtctgctgttttaaactctaaccagagtcacggacataaatctagaccc
aagttgaactttcatcctagttctaaacagctctctgaggctcccaaacacacatcacat
cttgagcaaatccagaacagcagatcgaaccacagctctaaccacaagcccaggccttcg
tttcaatcaagctcacatcgtagctccaaaacatcaagacacttaattcccactagttgt
gaaaccaaatctgatcatatttctcaatcaaaatctgcagctaatcataacactgggttg
agctgtagatctaaccccagccttaaacctagggccaagtcttcggagggtacagcccca
actgctgtgcgtgttaatcatactgtaacaacacggaagaaacctcagtccaaggagcag
gaggtagacctcagaggagatcatctttcccaaagggggagagaaaaccagagaaaagag
gacagacaacataaaaaacaacaagggaaaccggagagaaaggaagacaggaggctggcg
gaggagcagctactgagacgtccctggatccacagttcggcagaagaagaggaggaggag
gagggattgatagagaggcagaggaggagagaggaggcagcaagaggggaaaaccgtcga
ggaaggggacagcaacttcagtgtgaatggcagacagtcctggccaaagagagactgctg
accaacactgatcagggcagggcaaaaagagcagggagaagtgaggaagagagagagtta
cagcaagacccgtcaccgcctccgtcacgttcgccaactcctcacagaccacctacctcg
ccctccgtctcctccgctccaaactctgattcggaatctgaatatcaggctccgatcacc
aaagttccagcagactccacctcttacaaggcactccccaagagggggcggcaaagcctc
ggcaggtccggtgccgacaggccaaaagtcgtgctccccagaggacccacctcggctcat
ccaagtgaggggcagcaaaaactctacaccctggtcccattcgggcgaggtgaacaaact
acagcaccttcccagcgagggcttcgaaatctcgtggtgcagatagacctctgtcttctc
aaaagggtcccggacagcactaccagttccacccttgaaaagccctcctcctcttcctcc
ctgtcatccacgaaggacaagcaaagagaggccatgaaacacctgtacgtccctgagacc
gtgtcgaaggacagcaaaaggaaacgcaagtcggagaacggcgtgtcacacagagaaagc
aagaggagcattccccctgcgaaggacctctcgagccagaaggagcccgcacctcacgca
gtggagcgcaattttgtgacagaaaccgttcacaacgggtacttggaggagtacttggac
aacaagaggccgttgtctcctctgtctccactgtccgacagccctcagtccaccaagccc
cccctaaaaacaaagacctcagagcagcttcacgcccatgtccacaaaaacagagacagg
aatagagattctgctataaagcccaagatggagggggaatgtgtgaaagtgtcaagacag
ccccaaccaccatctgagtcctggggcgctgcaggacacaggggggccgtgccaaacagc
gaaactgcgcaccatgcggagtactacttacatgaagctaaaaggatgaagcaccgggca
gacgcgatggtggataagctggggaaggctgtgaattacgtggacgctgccctctccttc
atggaatgtgggaaagcaatggaggaagggccactggaggccaagtctccttatactatg
tactccgagacggtggagctaatcaggtacgcaatgaggctgaagagccactctggcccc
ggggcgagacaggaagacaaacagctggccgttctgtgcttccgatgccttgccctcctt
tactggcaaatgtttcgtttaaagaaggaccatgcgtttaagtattccaaagttctgctg
gactactttaaggtacatccaaaaacaggcttgacgttccagacttctcctaaagtgcct
tctacaccaccctgttggagtgactctgggaagggcacaggagcacccccttcctcactc
tcccccactgccaaacacctcggacgggggtcgcacgggggcagcgccttctcctccctt
ataagcattccccaacgtatccaccagatggcagcaaaccatctgaacattaccaacagt
gtcctgtacagctacgagtactgggaggtggctgacaacctcacaatggagaataaagag
ttcttcaactacttgaatactttgtctgggcctttgactcttcacagtagcatcgctcac
gccgtccaatacaccagacaggctcttcagtggatacgcatcagtgccaagcttaactaa
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