Gasterosteus aculeatus (three-spined stickleback): 120833706
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Entry
120833706 CDS
T07457
Symbol
hspd1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120833706 (hspd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gat03019
]
120833706 (hspd1)
03110 Chaperones and folding catalysts [BR:
gat03110
]
120833706 (hspd1)
03029 Mitochondrial biogenesis [BR:
gat03029
]
120833706 (hspd1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gat04147
]
120833706 (hspd1)
Enzymes [BR:
gat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
120833706 (hspd1)
Messenger RNA biogenesis [BR:
gat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
120833706 (hspd1)
Chaperones and folding catalysts [BR:
gat03110
]
Heat shock proteins
HSP60 / Chaperonin
120833706 (hspd1)
Mitochondrial biogenesis [BR:
gat03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
120833706 (hspd1)
Exosome [BR:
gat04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120833706 (hspd1)
Exosomal proteins of other body fluids (saliva and urine)
120833706 (hspd1)
Exosomal proteins of breast cancer cells
120833706 (hspd1)
Exosomal proteins of colorectal cancer cells
120833706 (hspd1)
Exosomal proteins of bladder cancer cells
120833706 (hspd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
120833706
NCBI-ProteinID:
XP_040057019
UniProt:
G3P2N4
LinkDB
All DBs
Position
XVI:16766862..16772696
Genome browser
AA seq
575 aa
AA seq
DB search
MFRLPTIMKQVRPVCRALAPHLTRAYAKDVKFGAEARALMLQGVDLLADAVAVTMGPKGR
NVIIEQSWGSPKVTKDGVTVAKSIDLKDKYQNIGAKLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFDTISKGANPVEIRRGVMMAVETVINELKNQSKPVTTPEEIAQVATISANGDV
EIGTIISNAMKKVGRKGVITVKDGKTLHDELEIIEGMKFDRGYISPYFINTAKGQKVEFQ
DAYVLLSEKKISSVQSIVPALEIANQHRKPLVIVAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKNQLRDMAVATGGTVFGEDAVGLALEDIQAHDFGKVGEVQITKDDTLLLKG
GGTPADVERRANEILEQLENTTSDYEKEKLNERLAKLSDGVAVLKIGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVPGGGCALLRCIPSLDTIKTANADQKIGVEIIRRALRIPAMTIA
KNAGVEGSLVVEKILQGPVDVGYDAMLGEYVNMVEKGIIDPTKVVRTALLDAAGVASLLS
TAEAVVTEIPKEEKEMPGGGMGGMGGMGGMGGMGF
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgtttgccaacaatcatgaagcaggtgaggcccgtgtgcagggcgctcgctcct
cacctcacgagagcctacgccaaggacgtcaagttcggcgcggaggcccgtgccctcatg
ctgcagggagtggacctgctggccgacgccgtggccgtcaccatgggcccaaagggtcgc
aatgtcatcattgagcagagctggggcagccccaaggtcaccaaggacggcgtgacggtg
gccaagagcatcgacctgaaggacaagtaccagaacatcggcgccaagctggtgcaggac
gtggccaacaacaccaatgaggaggccggcgacggcaccaccaccgccacggtgctggcc
cgcgccatcgccaaggagggcttcgacaccatcagcaaaggcgccaaccccgtggagatc
cgccgcggcgtcatgatggccgtggaaacggtcatcaacgagctgaagaatcaatccaaa
ccagtcaccacccccgaggagatcgcacaggttgctacaatctcagccaacggcgacgtg
gagattggcaccatcatttccaacgccatgaagaaagttggccgcaagggagtcatcacc
gtcaaggatgggaagactctgcacgatgagctggagatcattgagggcatgaagtttgac
cggggttacatctccccgtacttcatcaacaccgccaaaggtcagaaggtcgagttccag
gacgcctacgtgctgctgagtgagaagaagatctccagcgtacagagcatcgtgcctgcc
ctggagatcgccaaccagcaccgcaaaccgctggtcattgtggccgaggacgtggacgga
gaggcactcagcaccttggtgctcaacaggctcaaggtgggtcttcaggtggtggctgtt
aaagcgcccggctttggagacaacaggaagaatcagctgagggacatggccgtcgccacc
gggggaacggtgttcggagaggacgccgtgggtctcgccctcgaagacatccaggctcac
gacttcgggaaggtcggcgaggtgcagatcaccaaagacgacaccctgctgctgaagggc
ggcggcaccccggccgacgtggagcggcgcgccaacgagatcctggagcagctggagaac
accaccagcgactacgagaaggagaagctcaacgagcggctggccaagctgtccgacggc
gtggccgtgctcaagatcggaggaacgagcgacgtggaggtgaatgagaagaaggaccgc
gtgacggacgccctgaacgccacccgcgccgcggtggaggagggcatcgtgccgggcggc
ggctgcgctctgctgcgctgcatcccgtcgctcgacaccatcaaaaccgccaacgccgac
cagaagatcggtgtggagatcatcagacgggcgctgcgtattcccgccatgaccatcgcc
aagaacgccggcgtggagggttctctggtggtggagaagatcctgcaggggccggtcgac
gtcggctacgacgccatgctgggagagtacgtcaacatggtggagaagggcatcatcgac
cccaccaaggtggtgaggacggcgctgctcgacgccgccggagtcgcctccctgctctcc
accgccgaggccgttgtcacggagatccccaaggaggagaaggagatgcccggaggtggc
atgggagggatgggaggcatgggagggatgggaggcatgggtttctaa
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