Gasterosteus aculeatus (three-spined stickleback): 120833728
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Entry
120833728 CDS
T07457
Symbol
bard1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
120833728 (bard1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gat03019
]
120833728 (bard1)
04121 Ubiquitin system [BR:
gat04121
]
120833728 (bard1)
03036 Chromosome and associated proteins [BR:
gat03036
]
120833728 (bard1)
03400 DNA repair and recombination proteins [BR:
gat03400
]
120833728 (bard1)
Messenger RNA biogenesis [BR:
gat03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
120833728 (bard1)
Ubiquitin system [BR:
gat04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
120833728 (bard1)
Chromosome and associated proteins [BR:
gat03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
120833728 (bard1)
DNA repair and recombination proteins [BR:
gat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
120833728 (bard1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
zf-RING_6
Ank_3
Ank_5
Ank_4
BRCT
BRCT_2
Ank_KRIT1
zf-RING_5
zf-RING_UBOX
PTCB-BRCT
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
120833728
NCBI-ProteinID:
XP_040057061
LinkDB
All DBs
Position
XVI:12306187..12318687
Genome browser
AA seq
790 aa
AA seq
DB search
MMDNDVLVRKHDWENTKEAVRNFRRLLLCSKCSNVMTEPVCLGVCEHLLCRSCAAPRAGD
GCVVCQSPAWVKDIQINRQLSSIIQLFCGLEVLLNPVEQADCSLAQNQTPPQSPVLKQKK
NFKIWFSPRSRKVRCVVEKHPEDPVPEIPSPRETAAEQQDTSTAQCQDLSVFNFTSSSQD
SGSSGSPRSKNANGKKGSTKKSAVRGKGSAQGATRTTRRKTKQKLKKHRLEAINQQWGIS
EEEDALKEKEQKPCAKEPSRSSKRVSFLSPAVTSKEPQPKVPQGGTDELGPGRSPLEGAI
TVLGAPTQPGSSMSDTTKSPERRADASPLKPSSKRARVEEKVATLETTPKRPRASPGKRT
KRRKSQTSPAVHNPLPSDSRRCDESIENSRGEPGDSPSRPTAAGEKSPCTPVASGGRPTS
GSPAFMKKNHKGETPLHLAAIKGDVEAVNTLLDQGADPNLKDNAGWTPLHEACNLGHLLV
VELLVSRGALLNTPGYENDSPLHDAVRNGHPAIVQQLLRLGASRHVLNQHGKRPADYAGS
PEMLAIFREAPEGTQNASPSPSSGLSGGSNRVGRDEPVVLLTSGLSQPERALVAKLGELL
GGRTADTFSSPVSHVVVPVGHLPTTSSTLLGLLAGCWVVKFSWVEACLQAGEWTPEAEHE
AGEGAQRSRINRRSLLPPLFDGCFFFLLGRFKAISKDELTKLLREGGGQLLSRQPKPDSD
VTQTLSAAAYHALPGSDQALCTQYIIFDPQGPHRPAVVRRGKVWSAPCTWLLDCITAFRL
LPVSDCQTPV
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgatggataacgacgttctggtacggaaacacgactgggagaacacgaaggaagccgtc
aggaactttcgacggctgctactttgctccaaatgctcaaatgtgatgacggagccggtg
tgtctcggggtgtgcgagcatttgctgtgcaggtcctgtgcggccccccgggcgggagac
ggctgtgtggtgtgtcagagtccggcttgggtgaaggacatccagatcaacaggcagctc
agcagcatcatacagctcttctgtggtttggaggtcctgctcaatcccgtagaacaagca
gattgctcactagcccaaaaccaaacaccaccccagagccctgtccttaaacaaaagaag
aacttcaagatctggttcagcccacgcagccgcaaggtacgctgcgttgtggagaaacat
ccagaagacccagtaccagagatcccgtctcctcgggaaacggctgcagaacagcaggac
acctccactgctcaatgccaggacctgtcggttttcaatttcacctcgtcctcccaagac
tctggctcatccggttcgccgaggtccaaaaatgcaaacggaaagaagggctcgaccaag
aaaagcgctgtccgcgggaaagggtcggcgcaaggagccacgaggaccactcgaaggaag
accaagcagaagctgaagaagcacaggctggaggccataaaccagcagtgggggatcagc
gaggaggaggacgctttaaaagaaaaggagcaaaagccctgtgcaaaagagccgagcagg
tccagtaaacgagtttccttcctcagccccgccgtcacgtccaaggagccccagcccaaa
gtaccacaggggggtacggatgaactcggccccggcaggagtcccttagaaggtgccatc
actgtactgggcgcgccgacccagcctggttcgagcatgtcggacacaactaagagcccc
gagagacgggcggacgcgtctcccctgaagccctcctccaaaagagccagagtggaggag
aaggttgccacgttggagaccacgccaaaaaggcccagggcttccccggggaagaggacg
aagaggagaaaatcccagacgtctccagctgtgcataaccctcttccttcagatagccgc
aggtgtgatgagagcatcgagaactcaagaggggagccaggagacagcccgtctcgtccg
accgccgccggcgaaaaatctccatgtactccagtggcatctggtggaagacccacctcg
ggcagccctgcgtttatgaagaagaaccacaagggagagaccccgctgcatctggctgct
ataaagggcgacgtagaggctgtgaacacgctgctggaccagggggctgaccccaacctg
aaggacaacgccgggtggacacctctgcatgaagcatgcaacctgggccacctgctggta
gtggagcttctggtctcgaggggagccctgctgaacacaccgggctacgagaacgactct
ccgctccacgatgccgtgaggaacggacacccggccatcgtccaacagctgctgcggctc
ggagcctctcgacacgtcctcaatcagcacggaaagcggcctgccgactacgcagggagt
ccggagatgctggcgattttccgggaagccccagaaggaacccaaaatgcatctccaagc
ccctcaagcggtctctccggggggagcaaccgcgtggggagggatgaaccagtggtgctt
ctgaccagcgggctgtcgcagccggaacgggctctagtggccaaactgggagagctcctg
ggggggaggacggcggacaccttttccagcccagtgagccatgtggtggtgccagtagga
cacctccccaccaccagctccaccctccttggtcttcttgctggctgctgggttgtcaaa
ttcagctgggtggaggcatgtctgcaggcaggcgagtggacgcccgaagccgagcacgag
gcgggcgaaggcgcccagcggagtcgcatcaacagacgtagcttgctcccgccgctcttc
gacggctgtttcttcttcctgctcggccgcttcaaggcgatttccaaagacgagctcacc
aagctgctgcgggaaggagggggacaactcctgagccggcagcccaagcccgacagcgat
gtgacgcagaccctgagcgccgccgcctaccacgcgctgccgggctccgaccaggccctc
tgcacccagtacatcatctttgacccgcagggcccccacaggccggcagtggtgaggaga
gggaaggtgtggtcagctccctgcacctggctcctcgactgcatcactgccttccgtctc
ctccccgtgtccgactgtcagactccggtctga
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