Gasterosteus aculeatus (three-spined stickleback): 120833743
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Entry
120833743 CDS
T07457
Symbol
mid1
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1 isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120833743 (mid1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gat04121
]
120833743 (mid1)
Enzymes [BR:
gat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120833743 (mid1)
Ubiquitin system [BR:
gat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120833743 (mid1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
PRY
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
TRIM_CC
zf-RING_5
OCD_Mu_crystall
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
GARS_C
Inhibitor_Mig-6
Fn3_Dep-1_3rd
Motif
Other DBs
NCBI-GeneID:
120833743
NCBI-ProteinID:
XP_040057088
UniProt:
A0AAQ4QJD0
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All DBs
Position
16:8973715..8996260
Genome browser
AA seq
687 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILVSHCTPSEPIQSISAFQCPTCR
YVIALNQRGLEGLKRNVTLQNIIDRYQKASLSGPNSPNETRRARNSEAMTCPGDRVQCQF
CEQDPPQDAVKTCVTCEVSYCDECLKATHPNKKPFTGHRLIEPVPDSHPRGLMCLEHEDE
KVNMYCVTDEQLICALCKLVGRHRDHHVAALGDRFDKLKKSSGRFLCVVGRGHSHQEADQ
QALDSNLSSLIKRTSELESLMGKLIQTCQHVEINASKQENKLLEECDLLITIIQQRRLVI
ATKIKEGKSIRMRKLAQQIASCKQCIERSSSLITQADQTLKETDHARFLQTAKSTCERVS
MATASSQILLPEMNLNDTFDTFALDFTREKKMLESLDYLTAPNPPTIREELCTASYDTIT
VHWTSDDEFSVVSYELQYAIFTSQSNVVSLCNSADSWMIVPNIKQNCYTVHGLQCGTKYI
FIVRAINQAGHRSSEPGKLKTNSQPFKLDPKSAHRKLRVSHDNLTVERDETSSKKNHSQD
RFTSHSSYGVTGNVYIDSGRHYWEALIGGSSWFAVGIAYKSAPKHEWVGKNSASWVLSRC
NNSWVVRHNSKEMPIEPSPHLRRLGVLLDYDAGSLSFYDAVAAQHLHTFEINFAQPVCPV
FNVWNRCLTVLTGLPIPDHLEGTDYNN
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgctggagtcggaactgacctgcccaatctgtctggagctcttcgaggacccg
ctgctcttgccctgtgctcacagcctttgtttcaactgtgcccatcgcattctggtctca
cactgcacgcccagcgagccgattcaatccatcagcgccttccagtgcccaacctgtcgc
tatgtcatcgccctcaaccagaggggcctagagggactcaaacgcaacgtcacattgcag
aacatcattgaccgctaccagaaagcttctctgagcggacctaattctcctaacgagact
cggcgcgcccggaacagcgaagccatgacttgtcccggcgaccgggtgcagtgtcagttc
tgcgagcaggatccccctcaggacgccgtgaagacctgcgtcacctgcgaggtgtcctac
tgcgacgagtgtctcaaggccacccaccccaacaagaagcccttcacgggccaccgtctg
atcgagcccgtgccggactcccacccgcgggggctcatgtgcctggagcacgaggacgag
aaggtcaacatgtactgtgtgacggacgagcagttgatctgcgcgctgtgcaagctggtc
ggccgacaccgggaccaccacgtcgccgccctcggcgaccggttcgacaaactcaagaaa
tcgtctggccgctttctctgtgtggtgggccgtgggcattcacaccaggaggccgaccag
caagctttggattccaacctcagcagtctaatcaagaggaccagtgagttggaaagtctt
atggggaaactcatccaaacctgccaacatgtggagataaatgcttcaaaacaggaaaac
aagctgctggaggagtgtgacctgctgattacaatcatacagcagcggagactagtcata
gcaaccaagataaaggagggaaagtctatacggatgaggaaactagcccagcagattgcc
agctgcaagcagtgtattgagaggtcatcctccctcatcactcaggctgaccagactctg
aaggagacggaccacgctcgcttcctccaaacggctaaaagcacatgtgagagagtctcc
atggcaacggcctcctctcaaatcctgttaccagaaatgaacctgaatgatacctttgat
acttttgctttggacttcacgagggagaaaaaaatgctagaaagcttggattacctcaca
gcaccaaatccacccacaatccgtgaggaattatgtacagcttcatacgacacaatcacg
gttcactggacatcagatgatgaattctctgttgtatcatatgaacttcagtacgccatc
ttcactagccaatccaatgttgtcagtctgtgcaactctgctgacagctggatgattgta
ccaaacatcaagcagaattgctacactgtccacgggctccagtgtggcaccaagtacatt
ttcattgtgagggccataaaccaggctggacaccgcagcagtgaaccagggaaactcaag
accaacagtcaaccattcaagttggacccaaagtcagctcaccggaagctgagggtgtcc
cacgacaacctgacggtggagagggacgagacgtcctccaagaagaaccacagtcaggac
cgcttcaccagccacagcagctacggtgtcacagggaacgtctacatcgacagcggccgc
cattactgggaagctctgattggaggaagctcatggttcgcagtgggcattgcatacaag
tcagcgccaaaacatgagtgggttggcaaaaactctgcctcctgggttctgtctcgatgc
aacaactcgtgggtggtgcgtcacaacagcaaggagatgcccatcgagccctcaccccac
ctgcgtcgtcttggagtgctgttggactatgacgccggatcgctgtccttctacgacgcc
gttgccgctcagcacttgcacacattcgaaatcaacttcgctcagccagtgtgcccggtg
ttcaatgtgtggaacaggtgtttgacagttcttaccggactgcccataccagatcacttg
gagggcacagactacaacaactga
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