Gasterosteus aculeatus (three-spined stickleback): 120833770
Help
Entry
120833770 CDS
T07457
Symbol
trim13
Name
(RefSeq) LOW QUALITY PROTEIN: tripartite motif-containing 13
KO
K12003
tripartite motif-containing protein 13 [EC:
2.3.2.27
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120833770 (trim13)
04121 Ubiquitin system [BR:
gat04121
]
120833770 (trim13)
Enzymes [BR:
gat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120833770 (trim13)
Membrane trafficking [BR:
gat04131
]
Autophagy
ER-phagy
Other ER-phagy associated proteins
120833770 (trim13)
Ubiquitin system [BR:
gat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120833770 (trim13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-RING_5
zf-C3HC4_4
zf-C3HC4_2
RING_XB3-XBAT31
zf-C3HC4_3
zf-Nse
Motif
Other DBs
NCBI-GeneID:
120833770
NCBI-ProteinID:
XP_040057158
LinkDB
All DBs
Position
XVI:complement(6974444..6976479)
Genome browser
AA seq
443 aa
AA seq
DB search
MGILHTQLEHDCRTCILLPFYSNVVRNGLPVLPDWALSISGGVTMEELEEELTCPICCGL
FDDPRVLLCSHSFCKSCLEGLLEGSRGPAFRTPFKCPTCRKETPHNGANSLQINYSLRGI
VEKYGKIRVMPKMSECKQHCGQPLNIFCATDLNLICGFCATTDDHRGHTYCSLEEAYQRE
REAFEVLLRGXKSWQSADVLSCLETLQARKKKALMSVTKDAEKVLEYFDKLISTIECKKN
EILSDFETLKLVVLQEYDPEITRLRAAIEEHGRALGIADSFGGVSDPLCFLQQMQEFRAK
LKVLKETPLPSRKDAHVGPLVRNFDVKKWDSLRLGEVDKISVPHENGSYRTGGSRVTVPR
WIALNTVLLLSTLLLLQPHKLAAYVPSQIEPLLSAVSSHVTHTGVYLRELTGMYTSLIGA
GQECIGNLIKSAVSFFFNDDDLF
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgggaatactccacacccagctggaacatgactgccgaacctgtatccttttgccattc
tacagcaatgtcgtgcgtaatgggttgcccgtgctgcccgattgggctctatccatcagt
gggggggtgaccatggaggagctggaagaggaactgacgtgcccaatctgctgcggtctc
ttcgacgacccgcgggttttgctgtgctcgcacagcttttgcaagtcgtgcctggagggg
ctgttggaagggagccgaggtccggctttcagaacacccttcaaatgccccacttgccgc
aaagagacgccccacaacggcgcaaacagcctgcagataaactattctctgcggggaata
gtggaaaaatacggcaaaatacgagtgatgcctaaaatgtctgaatgtaaacaacactgc
ggtcagccactcaacatattttgcgctacggacttaaatctcatttgtgggttttgcgca
acgacagatgaccaccgaggacacacatactgctcattggaggaggcgtaccagcgagag
agggaggcgtttgaagtgctgcttcgcgggntgaagagctggcagagcgcagacgtcctg
tcctgcctggagacactgcaagccagaaagaaaaaggcgcttatgtccgtgaccaaggac
gcagaaaaggtgttagaatatttcgacaaactcatcagtaccatcgaatgcaagaaaaac
gaaatcctctccgactttgaaaccctgaagctggtggtgttgcaagaatacgacccggag
atcaccaggctgcgcgcagcgatcgaggagcacgggcgtgcgctcggcatcgcggattct
ttcgggggcgtctccgaccccctgtgcttcctgcagcagatgcaggagtttcgggccaag
ctgaaggttcttaaggagaccccgttgccctctcggaaagacgcccatgtcggccccctt
gtgcgcaatttcgatgtgaaaaagtgggattctctgaggctcggcgaagtggacaagatc
tcggtgccgcacgagaacggctcctaccgaaccgggggctcccgggtgacggtgccacgg
tggatcgccctgaacacggttctgttactgtcgactctgctcctgctgcagccgcacaaa
ctcgcagcttacgtgccctcgcagattgaaccattgcttagtgccgtttcctcgcacgtg
acccacaccggcgtgtacctgcgggagttgactggcatgtacacaagtctgatcggtgca
ggtcaggaatgtatcgggaacttgatcaaatctgctgtcagttttttctttaatgatgat
gatttattttaa
DBGET
integrated database retrieval system
