Gasterosteus aculeatus (three-spined stickleback): 120833838
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Entry
120833838 CDS
T07457
Symbol
col28a2a
Name
(RefSeq) LOW QUALITY PROTEIN: collagen, type XXVIII, alpha 2a
KO
K23619
collagen type XXVIII alpha
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gat01002
]
120833838 (col28a2a)
Peptidases and inhibitors [BR:
gat01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
120833838 (col28a2a)
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GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
VWA_3
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
120833838
NCBI-ProteinID:
XP_040057308
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Position
XVI:complement(10437634..10450179)
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AA seq
1242 aa
AA seq
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MLFARVVLLVTALTTVWAQDFYEEKKISKKYRTKPLVSNIHDGQAILDEDCSLELSFLLD
SSESAKDNHEQEKQLTVDMVDRLHGVQLQTGRSLSLKVAVLQYSSHVITEQTFRDWRGTE
NFKARITPVVYIGHGTYTTYAITNMTQLYLEESSPRSIKVALLLTDGISHPRNPDIFSAV
ADAKNQGVKFFTLGITRAANEPANVAQLRLIASSPASRFLHNLQDEGIVERIATEITGLA
NEGCPLAERCACEKGERGPSGPPGKKGRSGDDGAPGLKGLKGEAGLSGLPGREGAEGKPG
YKGEMGERGECGTPGIKGDRGPEGPVGTRGLRGLQGLPGPQGDIGPEGLQGKQGERGPSG
SAGIQGETGVGTSLGPKGDMGFQGRPGPPGPHGMGEPGLPGPQGPQGVQGEKGPHGEGFP
GQKGERGLTGPRGPRGQQGAGIKGERGDLGLPGFPGPTGLQGAGIQGEKGVEGPRGPPGV
RGHPGEGLPGTKGDQGLPGEQGATGDRGIGEPGSKGEPGSSGLGGLPGLPGEDGAPGQKG
EAGLPGLRGLEGAQGIGTQGEKGDQGPRGIRGLHGSPGVSGPSGPKGERGINGQQGTQGQ
PGRSISGPKGDVGTAGPPGPVGETGHGLPGPKGDRGLAGLPGSAGPKGDGIPGPTGPLGL
PGLPGEPGPEGVGIPGSKGDVGFRGLPGLPGPPGEGLQGHPGPVGRTGPLGPAGPTGEGI
QGPKGEPGSQGLTGPRGPQGDGFPGAKGDRGSQGERGMKGIKGDMGDHGVPGEAGRPGTK
GDQGLTREDIIRLIKEICGCGIKCKERPMELVFVIDSSESVGPENFEIIKDFVTRLVDRT
TVGRNATRIGLVLYSLEVHLKFNLVRHTSKQDVKQAIRKMPYMGEGTYTGTAIRKATQEA
FFSARPGVRKVAIVITDGQTDKREPVKLDLAVREAHAANIEMYALGIVNSSDPTQTEFLR
ELNLIASDPDSEHMYLIDDFNTLPALESQLVNQFCEDENGALIYNRITNVHWNGNNGHGV
NGNSGNRENTNGYGGYGNNGNVYGNNGFGNTNNGQNYQDEIENQRRSNGRGRGDTFTLPI
SADPRRIQVVEDDEGEDLDLRAQASRVGNTVVSVPVDNKTTSLSPVRERTVSNKTVLSTS
TSLSSSSSATSVSTLGSVSSSNSNWLKPVESPDLSEESRVPNPRCDLNLDQGTCRNYSIH
WYYDKQANACAQFWYGGCQGNENRYETENECKKTCVLSRTAG
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttgccagagtggtgctgctggttacagcactgaccaccgtctgggcccaagac
ttttacgaagagaagaaaattagcaagaaataccggaccaaacccctggtttcaaatatt
catgacggacaagccatcctcgatgaggactgtagcctggagctctccttcctgttggac
agctcggagagcgccaaggacaatcacgagcaggagaagcagctcaccgtggacatggtg
gaccggctgcacggcgtgcagctgcagaccggccgcagcctgagtttgaaggtggctgtg
ctgcagtacagcagtcacgtgatcacagagcagaccttcagagactggaggggcacagag
aactttaaggcccgcattactcccgtcgtctacatcgggcacggcacctacaccacctac
gccatcaccaacatgacccagctctacctggaggaatccagtccccgcagcattaaagta
gccctgctgcttacggacggtatttcccacccaaggaaccccgacattttctccgctgtt
gctgacgccaagaaccagggcgtgaagttcttcactttgggcatcacccgggcagccaac
gagccggccaatgtagcccagcttcgtctaatcgccagctccccagcgtcccgcttcctc
cataatttacaggacgaaggcatagttgaaagaatcgccactgagattactggcttggct
aatgaaggatgccctctggctgagcgatgtgcttgtgagaaaggggagaggggaccaagc
gggcctccggggaagaaaggtcgctctggagatgatggagctccagggctcaaagggcta
aagggtgaagcaggactaagtggtctacccggccgtgagggtgcggagggaaaaccgggc
tacaaaggagagatgggtgaaaggggtgagtgtggcaccccaggaatcaaaggagacagg
ggtcctgagggtccagttggaacaagaggacttagaggtctccaggggttaccaggacca
caaggagacattggacccgagggccttcagggaaagcagggtgaacgtgggccctcgggc
tctgcaggaattcagggtgaaactggtgttgggacatccctgggacccaagggggacatg
ggattccagggccgaccaggtcctcccggcccccatgggatgggtgaacccggccttcct
ggacctcaaggaccacaaggtgttcaaggggaaaaaggacctcatggtgaggggtttcct
ggacagaagggagaacgagggctaactggaccaagggggccaaggggacagcagggtgca
ggaatcaaaggagaaaggggtgacttgggacttccaggttttccagggccaactggactt
cagggagcaggcatacagggagagaagggagtcgagggtccaagaggtccacctggagtc
agaggacatccaggagaaggtttacctggaacaaagggagaccaaggcttaccgggagag
cagggtgccacaggagacagaggcattggtgagcctggttcaaagggagagcccggatca
tctggtttggggggcctgcccggtctcccaggagaggatggagctccaggacagaagggg
gaggcaggtttacccggtttaagaggtcttgagggagcacaaggaattggcactcaaggg
gagaagggggaccagggtccaagaggaatccgtggtttgcatgggtctcctggggtctcg
ggaccctcaggaccaaagggtgaacgtgggataaacggccagcagggcacgcagggacag
ccaggtcgttccatatcaggcccaaagggtgatgtaggcacagccggcccccctggtcct
gttggagaaacaggccatggattacctggtccaaagggcgatcgtggccttgcgggttta
ccgggttcagctggtccaaaaggtgacggcatccccggccccacgggtcctcttggcctg
ccaggattaccaggtgagcctggtccagaaggagtaggaattcctggttccaagggggac
gtcggctttaggggattgccgggtttacccggcccacctggagagggattacaaggacac
cctggtcctgttgggaggacaggaccacttggtccagctggacctacaggagaaggtatt
caaggcccgaagggtgagccaggatctcaaggtttgactgggcctagagggcctcaaggg
gatggatttcctggagctaagggagatcgtggctcacagggtgagaggggaatgaaaggt
ataaaaggtgacatgggtgatcatggagtccctggtgaagcaggaaggccaggaacaaag
ggagaccaaggactcacaagggaggacattattaggttgatcaaagaaatctgtggatgt
ggcattaagtgcaaagaacggccgatggagctcgtgttcgtcattgacagctctgagagt
gtcggccccgagaactttgaaatcatcaaggactttgtcactaggctggtcgaccggacc
acagttggacgcaacgccaccaggattggactggtcctctacagtctggaggtccatttg
aagttcaacttggtccgccacacgagcaaacaagacgttaagcaggcaatcagaaaaatg
ccgtacatgggcgagggcacctacaccggcaccgccatccgaaaggccactcaggaggct
ttcttcagcgctcggcccggagtcaggaaagtagccatcgtcatcaccgacggtcaaact
gacaaaagagagcctgtcaaacttgacttggccgtgagggaagctcacgctgcaaacatc
gagatgtacgcgctggggatcgtcaattcttctgatcctacgcagactgagttcctgcga
gaactcaacctcattgcctccgaccccgacagcgaacacatgtacctcattgatgacttc
aatactctaccagcactggagtctcaactcgtcaaccagttttgtgaagatgaaaatggc
gctctcatttacaatcgcattacaaatgtacactggaatggcaacaatggccatggtgtt
aatggaaacagtggaaatcgagagaacaccaatggatatggtggctatggcaataatggt
aatgtttatggaaataatggatttgggaacaccaacaatggtcaaaattaccaagatgaa
attgaaaatcagagacgtagcaacggccgagggcgtggagacactttcacgctgcccatc
agcgctgatcctcgtcgtattcaggtggtggaagatgatgaaggtgaagatttagactta
agagcccaagcttcgcgggttggtaatactgtagtcagtgtacctgtagataataaaaca
acatctctatcgcccgtaagagaaaggacagtctccaataagactgtcttatctacctct
acttctttatcctcctcctcatctgcgacatctgtgtcaaccctgggctcggtttcatct
tctaactctaattggttgaagccggtagagagtccagacctgtctgaagaatcccgtgtg
ccgaatcctcgctgtgaccttaacttggaccaaggcacctgccgaaactatagcatccac
tggtactatgacaagcaggccaatgcctgtgcacagttttggtatggaggctgtcaagga
aatgagaaccgttatgaaacagagaacgaatgcaagaagacttgtgttctatccagaaca
gcaggataa
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