Gasterosteus aculeatus (three-spined stickleback): 120833844
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Entry
120833844 CDS
T07457
Symbol
xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
120833844 (xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gat03400
]
120833844 (xrcc5)
DNA repair and recombination proteins [BR:
gat03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
120833844 (xrcc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
VWA_2
Motif
Other DBs
NCBI-GeneID:
120833844
NCBI-ProteinID:
XP_040057324
UniProt:
G3NS32
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All DBs
Position
XVI:complement(11709108..11715351)
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AA seq
730 aa
AA seq
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MAGGKAALVLCMDVGFSMSNSAPGEESPFELAKKVIQKFVQRQVFAETKDELALVLFGTD
STKNSLDRDGQYQNITVHRHLMVPDFQLLEEIENEIHPESQQADWLDALVVCMDLLKTGT
QGKKCDRVNISLLTDLNTPANSEQLDVIIENLKKANITLQFFLPFPAEDDEEDGGDADRR
SPGRPGTGKGLSREQQSGLDMVKHVMLTLNEEDGLDEIYSFRKAVEQLCMFKCIEKRPTA
WPCLLTIGSCLPIRIVGYKAVTEERLKKSWTTVDAQTNQKDDVKRETVYCLDDDNETEVQ
KDDTIQGFRYGSDIVPFSKVDQEQMKYKHDGKCFAVLGFTKQNLVRRHHFMGTQVMKVFP
AKEDEHAGIALSALVRALDGLNMAAIVRYAYNSISSPQVGAAFPCIKKDYECLIYVQLPF
MEDLRQFTFPSLENNKKFTPSDKQLSAVDSLIDSMMLVEEEGDDNGDQKDMFKVHHLPNP
AFQRHFQCLHHRGVSPGAPLPPMEPWLKAALERPHVITERCRGPLEEVKRTFPLTEVEKK
KKLKTSAQIFGKDSEEPDAKKAKGDEEEEEEDDYNFADIAEGSVTSVGSVNPAKDFRLLI
KKKSLPFGEVCQQLTGRIEQLLGNKNTPYYMKSITCIQAFREQSVKLGEANLYNGYLQSL
KRSIPNRGLEVFWELLVQDAITLISKDEVEGSTVSKTDADQFLVSEEKKEEAAAPPVEDT
GDVDDLLDMM
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggcagggggcaaagccgcgttggtgttgtgtatggacgttgggttctccatgtccaac
tcggccccgggtgaagagtccccttttgaacttgccaaaaaagtcatccagaagtttgtc
cagcgccaggtttttgcagaaaccaaagatgaactggctttagtcctgtttggcacagac
tccaccaagaactccctggaccgggacggccagtaccagaacatcaccgtgcatcgtcat
ctcatggtgcccgactttcagcttcttgaggaaatagagaatgagatccacccagagagt
cagcaggcagattggctggatgcacttgttgtgtgcatggatctccttaagacaggaaca
caggggaagaagtgtgatcgtgtcaacatttccctcctgactgacctcaacactccggcc
aactcagagcagctagacgttatcattgaaaacctgaaaaaagcaaacatcaccctgcag
tttttcttgcctttccccgcggaggatgacgaagaggatggaggagatgcggacagaaga
agccctggtcgcccgggcacgggcaaaggtctgtcgagggaacagcagagcggcctcgac
atggtgaaacacgtcatgctgaccctcaacgaggaggacggtctggatgaaatctactcc
ttcaggaaggcggtagagcagctgtgcatgtttaagtgcatcgagaagagaccgacggcg
tggccctgtctgctcaccatcggcagctgtctgcccatccgcattgttggatacaaagca
gtgaccgaggagaggctcaagaaatcgtggacgacagttgatgctcaaaccaaccagaaa
gacgacgtgaagagagagaccgtctactgtctggatgacgacaatgagacggaggtgcaa
aaagacgacaccatccaaggttttcgttacggaagtgacatcgttcccttctccaaagta
gatcaagagcagatgaaatacaagcacgatgggaagtgctttgctgtcctcggcttcacc
aagcagaacttggtacgccgccatcacttcatggggactcaagtcatgaaggtgtttccc
gccaaggaagacgagcatgccggaattgcgctgtcggctctcgtccgggcgttagacgga
ctcaacatggcggccattgtacgctacgcctataacagcatcagcagccctcaagtagga
gcggccttcccctgcatcaagaaggactatgagtgtctgatctacgtccagctgcccttc
atggaagacctcaggcagtttacatttccttctctcgaaaacaacaaaaaattcactccg
tcagacaagcagctgtctgccgtggactctctcattgactccatgatgctggtagaggag
gagggcgacgataatggagaccaaaaggacatgtttaaggtgcaccaccttcccaaccct
gccttccagaggcacttccagtgtctgcaccatcggggggtgagccccggcgcccctctc
ccccccatggagccctggctgaaggccgcccttgaacgcccgcatgtcattactgaacgt
tgccggggtccactcgaggaggtgaagaggacgtttcctctcacagaggtggagaagaag
aagaagctgaagacaagtgcacagatatttgggaaagactctgaggagccagatgccaaa
aaggcaaaaggagacgaagaggaggaggaggaggatgactacaactttgcggacattgcc
gaagggtctgttacttcggtgggaagcgtgaatccagccaaagacttcaggttgttgatc
aagaagaagagcctaccattcggggaggtctgtcagcaactgactgggaggatagagcag
ttgcttggcaacaagaacacaccgtactacatgaaaagcatcacctgtatccaggccttt
agagagcagtctgttaagctgggggaggccaatctgtacaacggctacctccagtcccta
aagagaagcatcccaaacagagggctggaggtcttctgggaactgctggttcaagatgct
ataactctgatcagcaaggacgaggttgaaggaagcacagtatccaaaaccgatgctgat
cagtttctggtttctgaggagaagaaagaggaggcggccgctccgccagttgaagatacc
ggagatgttgatgacttgctggacatgatgtaa
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