Gasterosteus aculeatus (three-spined stickleback): 120833861
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Entry
120833861 CDS
T07457
Symbol
gtf2e1
Name
(RefSeq) general transcription factor IIE subunit 1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120833861 (gtf2e1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gat03021
]
120833861 (gtf2e1)
Transcription machinery [BR:
gat03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
120833861 (gtf2e1)
Prokaryotic type
Archaeal type
TFE
120833861 (gtf2e1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Zn_Ribbon_TF
Motif
Other DBs
NCBI-GeneID:
120833861
NCBI-ProteinID:
XP_040057351
LinkDB
All DBs
Position
XVI:14340480..14345819
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AA seq
444 aa
AA seq
DB search
MIEPEVLTEVPAALKRLAKQVVRGFFGVEHALALDVLIRNPCVREEDMLELLKFDRKQLR
SVLNTLKADKFVKCRMRVETAPDGKTTRHNYYFINYRVLVNVVKYKLDHMRRRIETDERD
STNRASFRCPCCFSTFTDLEANQLFDPMTGTFRCTFCQTEVEEDASVCSDGRTLVARFNE
QIEPIYALLRETEDVNLSQDLLEPEPAEIPALKQSRDRAAAAAGLNLSGPHREAWSTKGS
SYADMYTQNVVISMEEQEEQQRQAMEGKAPKERPVWLTESTVQGAYSEPDVIKSSGDVAP
VAQDVTAGHGIGHADENEEVMRALLIHEKRGVAGPGGGGASTAARKLTSSKANASDSESD
TSESDDDSPSVPPAAAAQQRVAAEEEEDDDEFEEVGDEPMVMVGGRQFSYREVSQRPELV
AQMSAQEKEAYIELGQNLFQDMYF
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgatagaaccagaggtactgaccgaggtccccgcggcgctgaagcggctggccaagcag
gtcgtaaggggcttcttcggagtggaacatgcgttggccctggacgtgctcattcgcaac
ccgtgtgtgcgtgaggaggacatgctggagctgctcaagttcgatcgtaaacaactgcgc
tcagtgctcaacaccctcaaggcagacaagtttgtgaagtgtcgcatgcgagtggaaacg
gcgcccgatggcaagacaacgcgccacaactactacttcatcaactacagggtgttggtc
aacgtggtgaagtataaattggatcatatgcgaaggcgcattgagacggatgagcgagac
tccaccaaccgcgcttccttccggtgcccatgctgcttctccaccttcacagatctagag
gccaatcagctgtttgacccaatgaccggtacatttcgctgcaccttctgccagacagag
gtggaggaggacgcgtccgtctgttccgacggcaggacgctagtggcacgcttcaacgag
cagatcgagcccatctacgcgctgctacgtgagaccgaagatgttaacttgtctcaggat
ctgctggagcccgagccggctgagattcctgccctcaaacagagccgcgatcgcgccgcc
gcagcagccggactgaacctaagcggaccgcaccgcgaggcctggtcaaccaaaggctcg
tcttacgctgacatgtacacccagaatgtggtcatcagcatggaggagcaggaggagcag
cagaggcaggccatggaaggcaaggccccgaaggagaggccggtctggttgaccgagagc
accgtgcagggtgcttacagcgagcccgacgtcatcaagagcagtggagacgtcgctcct
gtggcccaggatgtaactgcaggtcatggaattggtcatgcagatgagaacgaggaggtg
atgcgcgccctgctcatccacgagaagagaggcgtggcgggaccgggcggaggcggagca
agcaccgcagccaggaagctcacctcctccaaagccaacgccagcgactccgagagcgac
accagcgaatcggacgacgactctccctcggttccgcccgccgcggcggcccagcaacgg
gttgccgcggaggaggaagaggacgatgatgagtttgaggaggtgggggatgagccgatg
gtgatggtgggaggccggcagttctcctaccgagaggtcagccagaggccggagctagtg
gcgcaaatgtctgcccaggagaaggaggcctacattgaattgggacaaaacctcttccag
gacatgtacttctga
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integrated database retrieval system
