Gasterosteus aculeatus (three-spined stickleback): 120833998
Help
Entry
120833998 CDS
T07457
Symbol
kars1
Name
(RefSeq) lysine--tRNA ligase isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
120833998 (kars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gat01007
]
120833998 (kars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gat03016
]
120833998 (kars1)
Enzymes [BR:
gat01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
120833998 (kars1)
Amino acid related enzymes [BR:
gat01007
]
Aminoacyl-tRNA synthetase
Class II (A)
120833998 (kars1)
Transfer RNA biogenesis [BR:
gat03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
120833998 (kars1)
Prokaryotic type
Other AARSs
120833998 (kars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
DUF374
CRLF2-like_D2
Motif
Other DBs
NCBI-GeneID:
120833998
NCBI-ProteinID:
XP_040057641
UniProt:
G3PT52
LinkDB
All DBs
Position
II:10955766..10962627
Genome browser
AA seq
609 aa
AA seq
DB search
MLCLVRAAGQQLCQACGVRGQWLKCAAPCAEAVSAHIYGIRWRGDKSELKRRMKADKKVA
EKEAKIKEQLDQKKESNDQGAQNACALDEETLDPNQYYKIRTQAIQELKGTAEDPYPHKY
HVDLSLTGFIEKYSNLQPGDQLTDVVLNVSGRVHAKRASGAKLIFYDLRGEGVKLQVMAN
SKTYKSEEAFAAINNKLRRGDIIGVRGNPGKTKKGELSIIPIEMTLLSPCLHMLPHLHFG
LKDKETRFRQRYLDLILNDYVRQKFITRSKIITYLRSFLDQLGFLEIETPMMNIIPGGAV
ARPFVTHHNELDMNLFMRIAPELYHKMLVVGGLDRVYEIGRQFRNEGIDLTHNPEFTTCE
FYMAYADYHDLMEITEKLLSGMVKHITGGYKVTYHPDGPEGPAQEIDFTPPFRRVSMTQD
LEKVMGVKFPPTDSYDSDETRKFFDNLCAQKGVECPQPRTTARLLDKLVGDFLEVTCINP
TFICEHPQIMSPLAKGHRTQKGLTERFELFMMKKEVCNAYTELNDPIRQRELFEQQAMAK
AEGDDEAMFIDESFCTALEYGLPPTAGWGMGIDRLAMFLTDSNNMKEVLLFPAMKPDENK
AAPTEGTSV
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgtctggtcagggcagccgggcagcagctgtgccaggcctgtggggtcaggggg
cagtggttaaaatgtgctgccccgtgtgcagaagcagtctcggctcatatttacgggatc
cgttggagaggtgacaaaagtgagctgaagagacgaatgaaagccgacaagaaggtggcc
gaaaaagaagccaagatcaaagagcagttggaccaaaagaaagaatccaacgaccaagga
gcgcaaaatgcctgtgcattggatgaggagacgctcgacccaaatcaatactacaagatc
cgcacccaggccatccaggaactgaagggcaccgcggaggacccgtacccccacaagtat
cacgtcgacctctcgctcacggggttcatcgagaaatacagtaacctgcagcctggagat
cagctgacggacgttgttctcaatgtctcaggccgcgtccatgccaagagggcttctggt
gccaagctcattttctacgacctgcgaggagaaggcgtcaagttgcaagtcatggcaaac
tcaaagacctacaagtctgaagaggcctttgcggcaatcaacaacaaactgcgtcgtggc
gatatcatcggtgtccgcggcaacccagggaagacaaaaaaaggagaattgagcatcatt
cccatcgagatgaccctgctatcgccatgtttgcacatgttgccccacctccactttggc
ctcaaagacaaggaaacacgtttccgccagcgctatttggatctgattctcaatgactac
gtgaggcaaaagttcataactcgctccaaaatcatcacatacctgcgcagtttcctggac
cagctgggatttttggagatcgagacccctatgatgaacattattcccggtggagcagtg
gctcgtccgtttgttactcaccacaatgagctggacatgaacctgttcatgcgaatcgca
ccggagctctaccacaagatgctcgtggttggcggactggaccgagtgtatgagattggt
cgtcagttcaggaatgaaggcatcgatcttactcacaatccagagttcaccacctgtgag
ttctacatggcgtatgccgattaccacgatttgatggagatcacagagaagctactctca
ggaatggtgaagcacatcactggaggatacaaggtgacgtatcaccctgacggtccagag
gggccggcacaggagattgacttcacaccgccattcaggagagtgagcatgacacaagac
ctggagaaggtcatgggagtgaagttccctcccaccgacagctacgacagcgacgagacg
cgcaagttctttgacaacctgtgtgcacagaaaggagtcgagtgtccacaacccagaacc
acggcccgcctcctcgacaagttggttggagatttccttgaggtcacctgtatcaacccc
acattcatctgtgaacaccctcaaatcatgagtcccttagcaaaagggcacagaacacag
aaaggcctcacggagcgctttgagctctttatgatgaagaaggaagtctgcaatgcttac
actgagttgaatgatccaattagacagcgggagctttttgagcagcaggcaatggcgaag
gcagagggcgacgatgaggccatgttcattgatgagagcttctgcacagctcttgaatat
ggactgccaccgactgccggctgggggatgggcatcgatcgcctcgccatgttcctcacc
gactccaacaacatgaaggaggtgctgctcttccctgctatgaagcctgacgaaaacaag
gcggcgcctacagagggcacctccgtctaa
DBGET
integrated database retrieval system
