Gasterosteus aculeatus (three-spined stickleback): 120834000
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Entry
120834000 CDS
T07457
Name
(RefSeq) LOW QUALITY PROTEIN: alsin-like
KO
K04575
amyotrophic lateral sclerosis 2 protein
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gat03036
]
120834000
Chromosome and associated proteins [BR:
gat03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
120834000
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RLD
RCC1
DH_Alsin
RCC1_2
PH_alsin
MORN
VPS9
Alsin_RLD
HA_Alsin
PH
DH_ALS2
RhoGEF
PH_16
DEF78-80
Motif
Other DBs
NCBI-GeneID:
120834000
NCBI-ProteinID:
XP_040057640
LinkDB
All DBs
Position
16:complement(13746604..13761542)
Genome browser
AA seq
1617 aa
AA seq
DB search
MEDTEESHADERAPTPPERGLLHIWQSAGPSAQLCPDRVLLSRPVLQASLGEHHGLLLTQ
GGQVYSFGELLWRDLSVPVSAPLLEISLLGRTVVRVAAGGFHCGALSEQGNVFMWGENTA
GQCGLSERGTDTSITVSEPCPVSVVDSDVVPPAAVQVVDLALGREHSLALSARNELWAWG
SGCQLGLVTNTFPVWRPQKVEHLAGRHVVQVACGAYHSLALVRSLHQQNXPQNASEKTQR
GQSPHCAVTEGEEPFAADAGHYCPLGVELTEVMTHETSPGRRDPRRRLQPGERTTPPVGN
TPPLQETEGRPRAHPMTGWRTNKKPAFPDEAELQNLLQKLSSHSLEMRHSAGPGDTDSMS
SYTSEDSCVSSTPSTDLLTSSYKEDSPVKSQSNNGVAAPYSSSVPVCLEEVRLCLAAEKR
ALRGPKSTSLTNINQKGKAAANRRRSLPGTPTQGSPRQRRCSAGRPSSSCRSRSAAPEEA
GGGLPSLETEVWSWGRGSEGQLGHGDQLARLQPLCIKCLTGEEVIKVAAGSHHSLALTAH
CQVYSWGSNMCGQLGHVNSPVTVPRQTELSDGLRVWDVSAGQSHSLLLADGDCVQPVLLY
CGPRKEPSCTQTERSRNTQRSPNRAESYAVRPDLLPFCVEMGYISGVCSGGQSCAALADV
NVMGFIGAIHELASRERRFYCWLSSVKRLVLTPLRSRESASPSLGEPCTHLFFSLCESFV
RLSLLIGQHSTALSYFLHDVQGCDIASLPLLTHSEHFLDVYNEYCSSVGDFQVMGGFRPL
HKLSLECLGSQQAVLAQLCEPDQSAGGKADLVSLLYWPLQQLHQYSRMLLKLAACYNVVT
TEYQSLDQGGSRYDSQSSSLLRRKKEAETTSLFWSSHSGKTTEVLRLPQRRVVCESGNRS
LTLQNAGRFSNHWFILFNDTLVHTQFSTHHIYPLASLWVKPVTEDGSGLYAIKITCPEES
FTLVASTPQEKNKWLRSLNQAVDHVLGGAGQGSSPGLAAMSRTASHTFCGEGRFKDAHYT
GAWVAGRIHGRGTMKWPDGRTYSGNFKSGQEDGYGECLIPDKVLNKPDGYQGHWRDGKIH
GFGKYKYASGEVYEGCFCDGHRHGYGMLSSGRMAKRSSSVFIGQWVHDKKTGYGVHDDIT
RGEKYMGLWLDEQRHGNATVVTQCGLYYEGNFRDNKMCGPGLLVSDDDTALHGEFSEDWM
VNGKGVLSLANGDSLEGMFSGEWTTGLKVVGTYFKPSAGEPEHKERSGLLRLGQYAVPAA
QRWLCVFDECWSRLGCDSAGRGERTAAWDSIAVTIATARRQSPNLSRSQSKVLECLECIP
QHGEPVTTANYDNIRRYLIKACETPHHPLGWLVETLVTAYRMTYVGVGSNRRLLRLAVQE
VLAYLTHFYRIVRFLFPGLPDDGGIIPDPPTSTPESKQKPDMSDQSGVVVLSFSSLLLPQ
LLPRLYPPLFTLYCLQEEQEDARYWERMLRLNKQPDRPLLRFLGVQEKFWPVWTSILGEK
KQIVSSSKDACFVSAVETLQQISTAFTPSDKLLVIQKTFEELTQEVKLMLDDSFLWCMDD
LLPLFIYVVLRARIRNLGAEVSLIEDLMDPNIQHGEMGLMFTTLQACYMQILQESAT
NT seq
4854 nt
NT seq
+upstream
nt +downstream
nt
atggaggacacggaggaaagccatgcagatgagcgggcccccacacctccagagcggggg
ctgctccacatctggcagtcggcgggccccagtgcgcagctctgtccagatcgagtgctg
ctgtccaggcccgtccttcaggcgagcctgggagaacaccatggcctcctgctgacacag
ggtggccaggtctattccttcggagagctgttgtggagggacttgagcgtcccggtgtcc
gcaccgctgctggagatctctctgttggggaggacggtggtccgcgtggccgccggcggc
ttccactgcggagcgctgagcgagcagggcaacgtcttcatgtggggggagaacactgcg
ggacagtgcgggctgagcgagaggggcacggacacgagcatcacggtttcagagccgtgc
ccggtcagcgtggtggacagcgacgtggtccctccagcagcggttcaggttgtggatctg
gcgctcgggcgggagcacagcctggccctgtcggcccggaacgagctgtgggcctgggga
agcggctgccaacttggcctggtcacaaacacctttcccgtgtggagaccacagaaggtg
gagcacttggcaggaagacacgtagttcaggtggcttgtggtgcctaccacagcctggcc
ctggttcgcagcttacatcaacagaatnnaccccagaatgcatctgagaagacgcagcgg
gggcagtcgcctcactgtgcagtgacggagggggaggagccctttgcagcggatgcaggt
cactactgtccgctgggggtggagctgactgaggtcatgacccacgagacgtctccgggg
agaagagaccccagacggaggctccaacccggggaaaggacgactcctccagttgggaac
accccccccctccaagaaacggagggccgccccagggctcacccaatgacgggctggaga
accaacaagaaacccgctttccccgacgaagccgagctccagaacctcctccagaaactg
tccagtcactctttggagatgcgccacagcgccgggccgggagacaccgactccatgagc
agttacacttcagaggacagctgtgtgtcctcaactccttccacggatctgttgacttcc
agttacaaagaagattcaccagttaagagtcaaagcaacaacggagtagccgcgccgtac
tcctcctctgttcccgtgtgtttggaagaagttcgactttgtctggcggcggagaagagg
gcactgaggggcccaaagagcaccagtctcacaaatataaaccagaaggggaaagcggca
gcgaacaggagacgctctctgccaggaacacccacccaggggtctccacggcaacggcgg
tgcagtgccggcaggccgtcctcctcatgtcggagccggtccgcggcaccggaggaggct
gggggtgggctgccgtctctggagacagaagtgtggagctggggccgcgggtctgaggga
caactgggacatggagatcagctggccagactccagcctctgtgcatcaagtgtttgact
ggcgaggaggtgatcaaagtagccgcagggtcgcaccattcactggctctcacagcccac
tgccaggtgtactcgtggggcagcaacatgtgcggacagctcggccatgtcaacagtcct
gtgactgtacctcggcagacagagctgtccgacggtcttcgggtttgggacgtgtcagcc
ggtcagagtcactccctcctcctggccgacggagactgcgtccagcccgtcctgttgtac
tgcggcccgcgcaaagagccgagctgcacgcagacggagaggtcacgcaacactcaaagg
tcgccgaacagagcagagagttacgcagtccgacccgacctgctgcccttctgcgtggag
atgggttacatcagcggcgtctgcagcggcggtcagagctgcgcggcgctggcagacgtg
aacgtgatgggctttatcggcgccatccacgagctggcctcccgagagcgacgcttctac
tgctggttgagcagcgtcaagcggctcgtcctcacgccgctacgcagcagagaaagcgcg
tcgccgtcgttgggggagccgtgcactcacctcttcttctctctctgtgagagttttgtt
cgtctgagccttctgattggtcaacactccacggcgctcagctacttcctgcatgatgtg
cagggttgtgacatcgcctcccttcccctgctgacgcactctgagcactttctggacgtt
tataacgagtattgttcttcagtaggagacttccaggtgatgggtgggttccgaccactc
cataaactctccctcgagtgtttaggctcccagcaggccgtgctcgctcagctgtgtgaa
ccagaccagtccgccggtggtaaagctgatctggtttccttgttgtactggcctctgcag
cagctgcaccagtacagccgaatgctgctcaaactggccgcctgttacaatgtggtgact
acagagtatcagtccctcgatcagggcggtagtcggtacgactcccagtcctcgtccctc
ttgaggaggaagaaggaggccgagaccacctccctcttctggagttcccactccgggaaa
accaccgaggtcctgcgtctcccgcagcgtcgcgtggtgtgtgaaagcggcaacagatct
ctgactctgcagaacgccgggcgcttctccaaccactggtttatactgttcaacgacaca
ctggtgcacacacagttctccacacatcacatctacccgctggcctctctgtgggtgaag
ccggtgactgaagacggcagcggactctacgccatcaaaataacgtgtccagaggagagt
ttcaccctggtggcctcgacgccgcaggagaagaacaagtggcttcggtctctcaaccag
gcagtggatcatgtgctgggcggcgcaggtcaggggtcgtcgccgggtttggctgccatg
tcccgcacggcctcacacacgttctgtggagaaggccggtttaaagacgcccattacacc
ggcgcctgggtggccgggcggatccacggcagaggcaccatgaagtggcccgatggacgg
acctacagcgggaactttaagagtggacaggaggacggatacggggagtgtctaattcct
gacaaagtgctgaacaagccggacggctaccaaggacactggagagacggcaagatccat
ggtttcggcaagtacaagtatgccagtggcgaggtgtacgagggctgcttctgcgacggc
cacaggcacggctacggcatgctgagctccggccggatggccaaaaggtcttccagcgtt
ttcattggccagtgggtccacgacaagaagacgggatacggcgtccacgatgacatcacc
aggggagagaagtacatggggctgtggctggacgagcagcgccacggcaacgctaccgtt
gtcacccagtgcggtttgtactacgaagggaatttcagagacaacaagatgtgtggacca
ggtctgctggtgtccgatgacgacacagctttgcatggggagttttctgaggactggatg
gtcaacgggaagggtgttttatcgctggctaacggggatagcctggagggcatgttcagc
ggggagtggaccacggggctgaaggtcgttggaacgtacttcaaaccgtccgcaggcgaa
cctgaacacaaagagagaagcggcctcctccggctgggtcagtacgcggtgccggcggct
cagaggtggctctgcgtgttcgacgaatgttggagtcgactgggctgcgattctgctggc
agaggagagaggactgcagcctgggacagcatcgcggtcaccatagcgactgcacggcga
caaagccccaatctcagtaggtctcagagtaaagtgctggagtgtttggagtgcattcct
cagcacggagaaccggtgaccacggcaaactacgacaacatacggagatacctcattaag
gcatgtgagacccctcaccaccctctgggctggctggtggagacgctggtgacggcctac
aggatgacctacgtcggcgtgggatccaaccgccggctgctcaggctggccgtgcaggag
gtcctggcctacctcacccatttctacaggatcgtcaggtttctgtttccggggctgccg
gatgatggcggcatcatcccagacccgcctacctccacacctgagagcaagcagaagccc
gacatgtcagatcaaagcggcgttgtggtgctgagcttctcctccttgctcctccctcag
ctgctccctcgactctacccgcctctcttcaccctgtactgcctgcaggaggagcaggag
gacgcccggtactgggagcgcatgctgcggctcaacaaacagcccgaccggccgctgctc
cgcttcctgggagtgcaggagaagttctggccagtgtggacgtcaattctaggggagaaa
aagcagattgtgtccagcagtaaagatgcctgctttgtttctgctgtagagacactccaa
caaatcagcacggccttcactccgtcagacaaactcctcgtcatccagaagacgtttgag
gaattgacccaggaagtaaaactgatgctggatgacagcttcctgtggtgcatggatgac
ctgctccctctcttcatatacgtggtgctcagagcgaggatcaggaacctgggagccgag
gtcagtctgatcgaagatctgatggatcccaacattcagcacggagagatgggcctgatg
ttcacaacactgcaggcctgttacatgcagatcctccaggagtcagcgacgtag
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integrated database retrieval system
