Gasterosteus aculeatus (three-spined stickleback): 120834092
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Entry
120834092 CDS
T07457
Symbol
lss
Name
(RefSeq) lanosterol synthase
KO
K01852
lanosterol synthase [EC:
5.4.99.7
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat00100
Steroid biosynthesis
gat01100
Metabolic pathways
Module
gat_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
120834092 (lss)
Enzymes [BR:
gat01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.7 lanosterol synthase
120834092 (lss)
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Gene cluster
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Prenyltrans
EspB_PE
Motif
Other DBs
NCBI-GeneID:
120834092
NCBI-ProteinID:
XP_040057814
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Position
XVI:6278152..6290023
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AA seq
735 aa
AA seq
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MPEGTHLRRRGGPYKTEPATDLSRWRLSNVEGRQAWCYVEGQNTPDRAQTMLEAHSLGLD
TSIFVSGSEAAHTAVDAALKGMFFYSQLQAEDGHWAGDYGGPLFLLPGLLITCHVAKIPL
ADAWQKEMVRYLRSVQLPDGGWGLHIEDKSTVFGTALSYISLRILGLEPDDPDMVRARNN
LHSKGGAVGIPSWGKFWLAILNVYSWEGMNTLLPEMWLFPTWMPAHPSTLWCHCRQVYLP
MSYCYAVRLAAEEDPLVLSLRQELYVQDYGTINWPAQRNNVAACDMYTPHSTLLTVAYMV
LNMYEAHHSSTLRGKAVKELYDHIQADDRFTKCISIGPISKTINMLVRWHVDGPSSPVFQ
EHVSRIPDYLWLGLDGMKMQGTNGSQLWDTCFAVQAFLEAGAQDNSRLAECLRDAHRFLT
ITQIPENPPEYQKYYRQMSKGGFPFSTRDCGWIVADCTAEGLKSVMLLQELCPSISQPVP
AERLYDAVDVLLSMRNCDGGFATYETKRGGKLLELLNPSEVFGDIMIDYTYVECTSAVMQ
ALRHFQKEYPEHRAEEIRSTLREGLEYCRKVQRPDGSWEGSWGVCFTYGIWFGLEAFACM
GHVYRDEDVCVEVQRACRFLLDRQMPDGGWGEDFESCEERLYIQSSSAQIHNTCWALLGL
MAVRHPDRRAIERGVQMLIDHQLPNGDWPQENIAGVFNKSCAISYTSYRNVFTVWTLGRF
STLYPSSPLAGKVQL
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagggaacgcacctgcggaggagagggggtccgtacaagacggagcccgccacg
gacctgagccgctggaggctgagtaacgtggagggccggcaggcctggtgctacgtggaa
ggtcagaacacccctgacagagcgcagacgatgctggaagcccattcgctgggcttggac
acgagtatatttgtgtccggctctgaagccgcccacacggctgtagacgcggctttgaaa
ggtatgttcttctacagccagctccaggccgaggacggtcactgggcgggggactatggc
ggacctctcttcctgctcccaggtctcctgatcacatgtcatgtggccaagatcccgctg
gccgacgcctggcagaaagagatggtgaggtacctgcgctccgtgcagctgccagatgga
ggctggggtctacatattgaagataagtcgaccgtctttggcacagcgctgagttacatt
tcattaaggatcctgggattagagcctgacgatccagatatggttcgagccaggaacaac
ctgcacagcaaaggaggcgctgtggggattccctcatggggtaaattctggttggccatc
ctaaatgtctacagttgggagggaatgaacaccctgctaccagagatgtggctgtttccc
acttggatgccagcccacccctccaccctgtggtgtcactgccgccaggtttacctcccc
atgagctactgttatgctgtccggctggctgcagaggaggaccccctcgtcctcagcctc
agacaggagctgtatgtccaggactatggcaccattaactggcccgctcagaggaacaat
gtggcagcttgtgatatgtacacacctcacagcacactgctcaccgtcgcctacatggtg
ttaaatatgtacgaagcccaccacagcagcaccctgagaggaaaggctgtcaaagaactc
tacgatcacatccaggctgacgatcgcttcactaaatgcatcagcatcggcccgatttca
aagactataaacatgctggttcgctggcatgtggatggcccctcctcgccggtctttcag
gagcacgtgtccaggatcccagactacctctggttgggattggatggcatgaaaatgcag
gggaccaatggctctcaactctgggatacttgttttgctgtacaggctttccttgaggcg
ggcgctcaagataactccagactagctgagtgcctacgagatgctcatcggtttctcacc
atcacacagatacctgagaatcctcccgagtaccagaagtactacaggcagatgagcaag
ggaggcttccccttcagtacccgagactgtggttggatcgtggccgactgcacggcggag
ggcctgaagtcagtgatgctgctgcaggagctttgtccctccatcagccagcctgttccc
gcagagcgcctgtatgatgctgtcgatgtattgctgagcatgagaaactgtgacggcgga
tttgccacgtatgaaactaagagaggagggaaactcttggagctgctcaacccgtccgag
gtgtttggggacatcatgatagattatacctatgtggagtgtacgtcagcagttatgcag
gctttgaggcacttccagaaggaataccctgaacaccgcgctgaggaaataaggtccact
ctgagagaaggactggagtactgcaggaaggtgcagaggcctgatggatcctgggaaggg
tcctggggagtgtgcttcacatatggaatatggtttgggcttgaagcctttgcttgtatg
ggtcacgtctacagggatgaggacgtgtgcgttgaggtgcagagagcctgccggttcctg
ctggaccggcagatgccggacggaggctggggggaggactttgagtcttgcgaggagcgg
ctctacatccagagcagcagcgctcagatccacaacacctgctgggctcttttaggcctc
atggccgtcaggcatcctgacagaagggccattgagagaggagtgcagatgctgattgac
caccagctgcccaacggcgactggccacaggagaatatcgctggtgtgttcaacaagagc
tgtgcgatcagctacacctcctacaggaatgtcttcacagtgtggaccctcggacgcttc
tcaacactttaccccagcagcccgttggcggggaaggtccagctgtga
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