Gasterosteus aculeatus (three-spined stickleback): 120834203
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Entry
120834203 CDS
T07457
Symbol
caprin1a
Name
(RefSeq) LOW QUALITY PROTEIN: caprin-1a
KO
K18743
caprin-1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gat03019
]
120834203 (caprin1a)
Messenger RNA biogenesis [BR:
gat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
120834203 (caprin1a)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_C
Caprin-1_dimer
FtsK_SpoIIIE
BCL_N
Motif
Other DBs
NCBI-GeneID:
120834203
NCBI-ProteinID:
XP_040058025
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All DBs
Position
II:9823143..9831875
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AA seq
632 aa
AA seq
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MPSAMVGNNAVQSAIPDLGSGSNSESIKQVLAVIDKKVRNMEKKKSKLDDCQTRKRNGEQ
LNQDQLDALTKYQEIANNLDFARELQKTFLSLGQEIQKAVKKMARREQLQREEMDQRRLK
AVLELQFLLDQLGDDNVRQDLKRPDATGSPLLTDADLTSLDELYKLVGPDRNYDIRLTGQ
YEEASAHLLELLESRDKAVAGTTYKSLKNALDKVLLSGYFDRAPTHQNGTCAEEEEQPEQ
EEQTVAAESSSGKQPSEPEETTTEKYTEPIKVETTEFVNRQFIPETMYSSADKDQVEEWT
VEAQMASSHQLQPPAQLATEPTVTVNHGIPPPEADPVVRKQVVQDLMAQLQGTYNFMQDS
MLEFDGQALDPAIVSAQPMKPVQMCGPSTHPESRLLPTCAVSGPPESSPVSMSLSSEPSP
TQCPLSSAFPPVSKSTHTGGINVNAAPFQSVQAVFNLNAPVPPATDGQADPLKQPGQFPG
GYGQGFSSQSESTVDQPDIPQETLQSVVGGFQPPDHVMPSAGSHEESPPAAALAQSGQSF
YNSRAVPRGAARSGRGMMNGYRGSNGFRGGYEGYRPPFSNAPSSGYGQTQFNTSRDYSNN
TYQREGYQQNYKRGPAQGPRSLSRGNAQAMRS
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgccttcagcgatggttggcaacaatgctgtccagtctgccattccagacttgggaagt
ggaagtaattctgagtcaataaagcaggttcttgctgtgattgacaagaaggttcgcaat
atggaaaagaaaaagtcaaaactcgatgactgtcagacaaggaagcgtaatggagaacaa
cttaatcaggatcagctggatgccttgaccaagtaccaagagattgccaacaaccttgac
tttgctcgagaattgcagaagaccttcctttcattgggtcaagagattcaaaaggcagtg
aagaagatggctagacgggagcagctgcagcgggaggagatggatcagcggaggttgaag
gcggttttggagctccagtttttactggaccagttgggagacgacaatgtacggcaggac
cttaaacggcccgacgccactggttcccctttgctcactgacgctgacctcacgtccctt
gatgagttgtacaaactggtgggacctgataggaactacgacatcaggttgactggccaa
tatgaagaggcctcggcacacttgttggaactactcgagagccgagataaggccgtggca
gggaccacatacaagtccctaaagaacgctctggacaaagtgctgctcagtggttacttt
gaccgagcaccgactcatcagaatgggacgtgtgcggaggaagaggagcaaccggaacaa
gaggagcagactgtggcggcggaatcttcgtctgggaagcagccatcagaacctgaagaa
acaactaccgaaaaatacaccgagccaattaaagtggaaaccacagagtttgtaaacaga
caattcattccagaaactatgtacagtagtgcagacaaagaccaagtggaggagtggaca
gtggaggctcagatggcgagctcccaccagcttcagccaccagcccagctggctacagag
ccaaccgttactgtgaaccatggcattcccccacctgaagccgacccagttgtcaggaag
caagttgtgcaagacctcatggctcagttgcaagggacgtacaacttcatgcaggactct
atgttggagtttgacggccaggctctggacccggccatcgtgtccgcccagccgatgaag
cctgtgcagatgtgcggcccttcaacccacccggagtccagacttcttccaacatgtgca
gtgtccggaccaccagaatcctcaccagtctcaatgtctctctcgtctgagccgtccccc
acccaatgtcccctgtcctctgcttttccacctgtctccaaatctacccatactggaggc
atcaatgtcaacgctgcacccttccagtcagtgcaagcggtattcaatctgaatgcacct
gtaccaccggccactgatgggcaagcagaccctctgaagcagcctggccagttccctggg
ggctatgggcagggcttcagcagccagtcagagagtactgtagaccagccggacatcccg
caggagacattacagtcagttgttggagggttccagcccccagaccacgtcatgccctca
gcaggaagccatgaagagtctcccccagccgcagcgctcgcacagtcaggccagtcattc
tacaacagcagggctgtgcccaggggagcagccaggagcggccggggcatgatgaacgga
tatcggggctccaatggatttagagggggttatgaaggttatcgccctcctttctcaaat
gcccccagcagtggttatggtcaaacccaatttaacacctctcgcgactattccaataac
acctaccaacgggagggatatcagcaaaactacaagcggggccctgcccaaggacctcga
agtttgtcaagaggaaatgctcaagcaatgaggtcctaa
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