Gasterosteus aculeatus (three-spined stickleback): 120834296
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Entry
120834296 CDS
T07457
Symbol
stxbp5l
Name
(RefSeq) syntaxin-binding protein 5-like
KO
K08518
syntaxin-binding protein 5
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gat04131
]
120834296 (stxbp5l)
Membrane trafficking [BR:
gat04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
120834296 (stxbp5l)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
120834296 (stxbp5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WDR55
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_HPS5
WD40_Prp19
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Lgl_C
Synaptobrevin
Beta-prop_DCAF4
Beta-prop_VPS8
Beta-prop_WDR19_1st
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
120834296
NCBI-ProteinID:
XP_040058150
LinkDB
All DBs
Position
XVI:14376728..14451107
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AA seq
1216 aa
AA seq
DB search
MSHKRSGKTVRHGFPYQPTALAFDPVQKILAVGSRTGGIRILGRPGVDCYCQHESGAAVL
QLQFLINEGALVTACADDTLHLWNLRQRRPAVLHSLKFNRERITFCHLPFMSKWLYVGTE
RGNTHIVNIESFVLSGYVIMWNKAIELATKTHPGPVVHLSDSPKDEGKLLIGFESGTIVQ
WDLRGKKADFRIYYDEAIHSVGWHHEGKQFMCSHSDGSLSMWNLRNTTKPFQVTFPHGKI
QKDGRKESCKPILKVEYKTSRNSEPFVIFSGGLSYDKAGRRPTLTIMHGKAITVLEMDYP
IVEFMALCETPYNNEVQEPYAVVVLLEKDLIVVDLTQSNFPVFENPYPMDIHESPVTCTA
YFADCPPDIIPILYSIGAKHKKTGYSHKEWPVAGGTWTLGSNTYPEIIVTGHADGSIKFW
DASAITLQMLYKLKTSKAFEKPKPAEGRAAEMVEEDPFAVQMVSWCPHSRIFCVVGISAH
IILYRFSKYEANTQIVSLEVRLQCESEDIITPSENENNPCFSESGSHSPQAHHQHPASPG
GGTPEGNKDSIPCIKVKDRMVRVPPGYQAELVIQLLWLDGEPPQQITSLDINSAYGLLAF
GNCNGLAVVDYLQKTILLCVSTLDLYGAADPYQRLTRSPRRNRQSTSEFCMRGLSNFYSD
SKKRIRTSYQSLTELSDNQQSVDMERSKSPTSVHYPTSLHNEPRVHPEPVASLRASHCSP
VFYLLDNVKGPGRKLSLPTDLKTDLDHVNGHCTSPTSQPKPRVPMGPEGPRLTRRGPGRP
PFRKAQSAACMEISLPVSHTEGYASRRAMLQQFHGVTMYSHDEHPTSAPYCWSERESREN
SFSRSRSSSVCSIDRDTKEAITTLQFGESYGRKSDAMPTPCLWVGTSLGMVLLIPLSIPA
DQEERMEEPVTIGPSGTVLMLKGSVLRFSFLDCMGALIQSPHEVWRDANASEDPDRPRRR
KLVNFSPSSSQDNCGEGHLAVVCSEKQAKVVLMPSQSCLFVHNITESSFVLRADVVSVCG
SVCLACFCANGHVMTLSLPSLRPLMDVNYLPLTDMRIARTFCFTNGGQALYLSSPTEIQR
ITYSQEMCDNLQEMLGELFTPIETPEAQNRGFLKGFFGGNSHNFDREELFGEASAGKASR
SLAQHIPGQAGMEGMKVAASGVMGDLARARVALDERGQRLGELEDRTALMMTSAETFSKH
AHELMLKCKDKKWYQL
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacaagcgatcaggcaaaactgtgcgtcacggctttccttaccagccgactgct
ttggcctttgaccctgtgcagaagatcctggccgtgggctccagaacaggcggcatacgg
atactgggacgacccggtgtggactgctactgtcagcacgagagcggggcagcagttctt
cagctacagtttctcatcaatgagggagcgctggtcacagcctgtgcggatgacacactt
cacttgtggaatctccgtcagaggcgaccggctgtcctccattcgctaaagttcaacaga
gagaggatcacgttttgccaccttcccttcatgagtaaatggctgtatgtggggacagag
cgtggaaacacgcacatcgttaacatcgagtccttcgtgttgtccggatacgtcattatg
tggaacaaggccatagaactagcaactaaaacccatccaggacccgtagttcatttgagc
gacagcccaaaggacgaaggcaagctgctcatagggtttgaaagcgggacgatcgtacag
tgggacctccggggcaagaaagccgacttcagaatctactatgacgaggccatccattca
gtcggctggcatcatgaagggaagcagttcatgtgcagtcactcagacggcagcctgtcc
atgtggaacctcagaaacaccaccaagccgttccaggtcaccttccctcatggaaagata
cagaaggacgggagaaaggagtcgtgtaaaccgatcctcaaagtggagtacaagacctcg
aggaacagcgagccttttgttatcttctctggcggcctttcgtacgacaaggcagggcgc
cggcccacgttgaccatcatgcatggcaaggccatcactgtgctggagatggactatcct
attgtcgagttcatggcactctgcgagactccatacaacaacgaggtccaagagccttac
gcggtggtggtgcttttggagaaggacttgattgtggtggatctgacccagagcaacttc
cctgtctttgagaatccttaccccatggacatccatgagtctccagttacctgcacagcc
tattttgcagactgtccgcccgacattatccccatcctctactcgataggggctaaacac
aagaagaccggctacagccacaaggagtggccagtcgctggaggaacgtggacgttaggc
tccaacacctacccagagatcatcgtcacgggacatgctgacggatcaattaagttttgg
gacgcatccgcaatcacgctacagatgttgtacaagctgaagacctccaaagcctttgag
aagccgaagccagctgagggccgggcggccgagatggtggaagaagaccccttcgctgtt
caaatggtcagctggtgcccccacagccgcatcttctgtgtggttggcatctcggcccac
atcatcctgtaccgcttcagcaagtacgaggccaacactcagatagtgtcactggaggtc
cgcctacaatgtgagtcggaggacatcatcactccgtctgagaatgaaaacaatccctgc
ttctccgagtccggctcccactcacctcaggcccaccaccaacacccggccagccccggc
ggcggcacgcccgagggcaacaaagacagcatcccgtgcattaaggtaaaggaccggatg
gttcgggtccctccggggtaccaggcagagctggtcatccagctgctgtggttagatgga
gaaccaccacaacagataaccagcctggacatcaactctgcctatggcctcttggcgttc
gggaactgtaacggcctagccgtggtggactacttgcagaaaaccatcctgttgtgtgtg
tcgacactggatctgtacggagctgccgatccgtaccaacgccttacccgctcgccgcgc
aggaacagacagtccacctcagagttttgcatgcgcggcctgtctaacttttattcagat
tcaaagaaaaggatccgtacatcctatcagagccttaccgaactctctgacaaccagcag
tccgttgacatggagagaagcaagtcacccacctccgttcattacccaacctcccttcac
aatgagccgcgcgtccacccagagcccgtggccagtctgagagccagccactgcagtcca
gtcttttacttgctggacaatgtaaagggacccggcagaaagttaagtctgccaacagat
cttaagactgatcttgatcatgtcaatggacattgcactagccccacctcccagcccaag
cctcgcgtcccgatgggccccgaggggccacggcttacccgcagaggccctggccgaccg
cccttccgcaaggcccagtccgctgcttgcatggagatctcattgcctgtgtcccacact
gaaggctatgcatccaggagggcaatgcttcagcagtttcacggagtcactatgtactcc
cacgacgagcaccccaccagcgccccctactgctggagtgagagagagagccgtgaaaac
tccttcagtcgctcgcgcagctccagtgtttgcagcatcgaccgggacaccaaagaggcc
atcaccaccctgcagttcggagagtcctacgggcgcaagagtgacgcaatgcccaccccg
tgtctatgggtgggtaccagcttaggcatggtccttctcattcccttgtccattcctgcc
gaccaggaggaaaggatggaggagcccgtgacaatcggacccagcggcacggtcctgatg
ctgaagggctcggtgttgcgcttcagcttcctggactgcatgggagcgctcatccagagc
ccccacgaggtttggcgcgacgccaacgcctccgaggaccccgaccggccgcggaggcgt
aagctggtcaacttttcgccatcgtcctcccaggacaactgcggggaggggcacctggcc
gtggtgtgctccgagaagcaggccaaagtcgtgctgatgccctcgcagtcctgcctcttc
gtccacaacatcaccgagtcgtccttcgtactgcgggccgacgtggtgtctgtgtgcggc
agcgtgtgcctggcctgcttctgcgcaaacggacacgtcatgaccctcagtttgcccagt
ctgagaccgctgatggatgtgaattacctgcctctgacggacatgcgcatcgctagaacc
ttttgcttcaccaacggggggcaggcactatatctcagctccccgacagagatccagaga
attacatacagccaggagatgtgtgacaacctgcaggagatgctgggggagctgttcaca
ccgatagaaacaccggaagcgcagaacagaggcttcctaaagggcttctttggagggaat
tctcataacttcgacagagaggagctttttggtgaggcgtcggctgggaaggcttctcgc
agcctggcccagcacatccccgggcaggcggggatggagggcatgaaggtggcagctagc
ggggtcatgggagatctggcgagggcccgcgtcgctctcgacgagaggggccaaaggctc
ggggagctggaggaccgaaccgcgctgatgatgaccagcgcggagaccttctccaaacac
gcccacgagctgatgctgaagtgcaaagacaagaagtggtaccagttgtaa
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