Gasterosteus aculeatus (three-spined stickleback): 120834402
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Entry
120834402 CDS
T07457
Symbol
itga6a
Name
(RefSeq) integrin alpha-6 isoform X1
KO
K06485
integrin alpha 6
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04382
Cornified envelope formation
gat04510
Focal adhesion
gat04512
ECM-receptor interaction
gat04514
Cell adhesion molecules
gat04810
Regulation of actin cytoskeleton
gat04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120834402 (itga6a)
04514 Cell adhesion molecules
120834402 (itga6a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120834402 (itga6a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
120834402 (itga6a)
04810 Regulation of actin cytoskeleton
120834402 (itga6a)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
120834402 (itga6a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gat04147
]
120834402 (itga6a)
04515 Cell adhesion molecules [BR:
gat04515
]
120834402 (itga6a)
04090 CD molecules [BR:
gat04090
]
120834402 (itga6a)
Exosome [BR:
gat04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120834402 (itga6a)
Exosomal proteins of breast milk
120834402 (itga6a)
Cell adhesion molecules [BR:
gat04515
]
Integrins
Integrin alpha subunits
120834402 (itga6a)
CD molecules [BR:
gat04090
]
Proteins
120834402 (itga6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
120834402
NCBI-ProteinID:
XP_040058306
LinkDB
All DBs
Position
XVI:complement(10147329..10160997)
Genome browser
AA seq
1090 aa
AA seq
DB search
MPLPQPGRPAAVCVALLFYSLFLEPTLVLAFNLDTGHVIRKDGEPGSLFGFSLAMHRQLN
PDKRMLLIGAPRARALGKQTANITGGLYKCEMTQSPHCERIEFDSEEDVRVENKENQWMG
VTVQSQGPGGKIVTCAHRYQRRSFVNTPLEYRDITGRCYVLSQDLTIDSLSDEDGGNWNF
CKGRPRGHEMFGSCQQGLAATFTKDYHYVVFGAPGAYNWKGIVRVEQKNNTLIEMGVYDD
GPYEVGDEHLLSPELVPVPANSYLGFSLDSGHGITRGRGLTVVAGAPRANHSGAVVLLKK
ESEASSRLLVEHTLHGPGLASSFGYDVTVVDLNGDGWQDIVVGAPQFYMKDGDVGGAAYV
YINQAGRWDKITPVRLNGTKDSMFGLAVENIGDVNQDSYEDIAIGAPYDDGGAGKVFIYH
GSAQGITTGPAQILSGKAHNTRLFGYSLAGNMDLDSNSYPDVAVGSLSDTALIYRSRPVI
SIRRDVKISPKEIDLTAKTCGQSICFTVDACFTWESNTASYNPRLTIGYSIEADGDRRKH
GLTSRVMFLNKSRTETDFQLNGTLDLRGQNQKSCIKITAKLKDNIKDKMRSVPIEVSADI
AGTKRQKARNGLSQLMPILDSSQPSKDVIQVNFVKEGCGRDHVCRSNLKMEYKLYYKQSN
LDVYSPLPVNNNVPVFHLSYERKDLALRVTVSNMNDDDAYEAKLLGTFPDALSYSGVRSH
DRTLEKPIICTANLNGSQAECELGNPFKRDSKATFYIILSTVGMTLHTNEIDINLQLQTT
SVQEDIVPVKVKAKVIIELPLSVSGEASSNQVSFGGVVKGESAMKTEEEIGSLITYTFRI
HNLWKSSVKASLHIQWPKWSKDGKWLLYLVKITAAGPEDVRCSPESEISSLKHVQEASAS
RTRREIGERITVGRMSSMSDKKKVLTCDGEIRCVVLKCPLQGMDGTSLELRSRLWNSTFI
EDYASTPNLHIVVKASLVLHTQAKNMILRTPHTDVTVSVSPEGAVAQHTGVPWWIILVAV
LAGILILALLVFLLWKCGFFKRSKRDDSVPSYHAVRIRKDSPEHQDGKVKLDLLDKKPWM
TNWMDSESYS
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgccgcagccgggaagacccgccgccgtgtgcgttgcacttttattctattct
ctttttctggagccgactttggtgctcgcgttcaacctggacaccggtcatgtcatcagg
aaggacggagagccggggagtctgttcgggttctccctcgccatgcaccggcaactcaac
ccggataagagaatgctgttgattggagcaccgagagccagagctttggggaaacagaca
gccaacatcacaggaggcctttataaatgtgaaatgactcagtctccccattgtgagcgt
attgaattcgatagtgaagaggacgtacgcgttgagaacaaggagaatcagtggatgggg
gtgacggttcagagccagggacccgggggaaagattgtcacttgtgcccatcgctatcag
aggcgctcgtttgtgaacacgcctctggagtaccgggacatcacggggcgctgttacgtt
ctgagccaggacctgaccatcgactcgctctccgacgaggacggaggtaactggaacttc
tgcaagggcagacccagaggccacgagatgttcggatcttgccaacaaggtttggctgcc
acctttaccaaggactaccattacgtggtgtttggagcaccgggagcgtacaactggaaa
ggcatcgttcgagtggagcaaaagaacaacactttgatagagatgggggtgtacgatgac
ggcccgtatgaagtcggagatgagcatctcttgagcccggagctcgtgcccgtacccgcc
aacagctacctgggattctccctcgactcgggacacggcatcacgaggggccgaggcctg
acggtggtggctggagcgcccagagccaatcacagcggagctgtggtcctgctgaagaag
gagagcgaagcctcctccaggctgttggtggagcacacgctgcacggcccgggactcgcg
tcctcgttcggctacgacgtgaccgtggtcgacttgaacggtgatggatggcaagacata
gttgtgggagcccctcagttctacatgaaggacggagacgttggaggagctgcttacgtc
tacatcaaccaggcaggcaggtgggataaaatcacacccgttcggctaaatgggaccaag
gactccatgttcggacttgcagtggaaaacatcggagacgtcaatcaagactcatacgaa
gacatcgccattggagctccttatgatgacggcggtgcagggaaagtcttcatataccac
ggctctgcacagggaatcacaaccggccctgcacagatcctttcaggaaaagcgcacaac
acgcgactctttggatattctctggcagggaacatggacttggacagtaactcgtatcca
gatgtggctgtgggctccctgtcggacacagctctgatctacaggtcacggcccgtcatc
agcatcaggagagatgtcaaaatatctccaaaggaaatcgacctcacagcgaaaacctgc
ggtcaaagcatttgcttcacggtggacgcgtgcttcacctgggaatcaaacaccgcatct
tacaaccccagactgactatcggctactccatcgaggcggacggagatcgcaggaaacac
gggctgacctccagggtgatgttcctcaacaaatcccgcacggaaacagacttccagtta
aacggcaccttggatctccgcggccaaaaccagaagtcctgcatcaagataacagccaaa
ctaaaagacaacattaaggacaagatgcgcagcgtccccatcgaggtgtctgcagacatc
gccgggactaaacgacagaaggcgaggaacggcctctcgcagctgatgcccatcttagac
tcctctcaaccaagcaaagacgtcattcaggtgaactttgtgaaagagggatgtggaagg
gatcatgtttgccggagcaacctgaagatggagtacaagctgtactacaaacaaagcaac
ctggacgtgtactccccactgcccgtgaataacaacgtgccagttttccatctgagttac
gagaggaaggacttggctctgcgagtgacggtcagcaacatgaatgatgatgatgcttac
gaggcgaagctgctggggacgttcccggacgcgctgtcttattctggagtgcgctcacat
gacagaacgctggaaaagccgatcatctgtacggccaatctgaacggctctcaagcagaa
tgtgagctgggaaatcctttcaagagagactcaaaggctacattttacatcatcctgagc
actgtgggtatgacgctccacaccaacgagatcgacatcaacctgcagctccaaactaca
agtgtgcaagaagacattgtccccgttaaagtgaaggctaaagtaatcattgaattgccg
ttgtcggtcagcggagaagccagttctaaccaggtttccttcgggggtgtcgtgaaaggg
gaaagtgccatgaagacagaggaggagattggaagcttgataacttatacattcagaata
cacaatttgtggaagtcttctgtcaaagcttcacttcacatccagtggcccaaatggagc
aaagacggtaaatggctcctgtacctggtgaagatcaccgctgcaggacccgaggacgtc
cgctgctctcccgagtctgaaatcagctccctcaaacacgtccaggaggcctccgcgtcc
agaacaaggcgtgaaattggagaaagaataactgttggcagaatgtcgtcaatgtcagac
aagaagaaggttttgacatgtgacggtgagatcagatgtgtggtgctcaagtgcccccta
cagggcatggacggaacatcacttgaactgagatcccgtctgtggaactcgacctttatt
gaggattacgcctccaccccaaacttgcacatcgtggtgaaggcctccctcgtcctccat
actcaggctaaaaacatgatcctgagaactccccacacggacgtgacggtgtccgtgtcc
cctgaaggggcggtggcgcagcacaccggagttccctggtggatcatactggtggccgtg
ctcgcaggcatcctgatcctggctttgttggtgtttctgctctggaagtgcggattcttt
aaacgctccaaacgagacgacagcgtcccaagttaccacgcggtgcggatcagaaaggac
tcccccgagcaccaggatggaaaagtcaagcttgatctccttgataagaagccgtggatg
acgaattggatggacagtgaaagttactcgtga
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