KEGG   Gasterosteus aculeatus (three-spined stickleback): 120834402
Entry
120834402         CDS       T07457                                 
Symbol
itga6a
Name
(RefSeq) integrin alpha-6 isoform X1
  KO
K06485  integrin alpha 6
Organism
gat  Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04382  Cornified envelope formation
gat04510  Focal adhesion
gat04512  ECM-receptor interaction
gat04514  Cell adhesion molecules
gat04810  Regulation of actin cytoskeleton
gat04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:gat00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    120834402 (itga6a)
   04514 Cell adhesion molecules
    120834402 (itga6a)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    120834402 (itga6a)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    120834402 (itga6a)
   04810 Regulation of actin cytoskeleton
    120834402 (itga6a)
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    120834402 (itga6a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gat04147]
    120834402 (itga6a)
   04515 Cell adhesion molecules [BR:gat04515]
    120834402 (itga6a)
   04090 CD molecules [BR:gat04090]
    120834402 (itga6a)
Exosome [BR:gat04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   120834402 (itga6a)
  Exosomal proteins of breast milk
   120834402 (itga6a)
Cell adhesion molecules [BR:gat04515]
 Integrins
  Integrin alpha subunits
   120834402 (itga6a)
CD molecules [BR:gat04090]
 Proteins
  120834402 (itga6a)
SSDB
Motif
Pfam: Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 Integrin_alpha
Other DBs
NCBI-GeneID: 120834402
NCBI-ProteinID: XP_040058306
LinkDB
Position
XVI:complement(10147329..10160997)
AA seq 1090 aa
MPLPQPGRPAAVCVALLFYSLFLEPTLVLAFNLDTGHVIRKDGEPGSLFGFSLAMHRQLN
PDKRMLLIGAPRARALGKQTANITGGLYKCEMTQSPHCERIEFDSEEDVRVENKENQWMG
VTVQSQGPGGKIVTCAHRYQRRSFVNTPLEYRDITGRCYVLSQDLTIDSLSDEDGGNWNF
CKGRPRGHEMFGSCQQGLAATFTKDYHYVVFGAPGAYNWKGIVRVEQKNNTLIEMGVYDD
GPYEVGDEHLLSPELVPVPANSYLGFSLDSGHGITRGRGLTVVAGAPRANHSGAVVLLKK
ESEASSRLLVEHTLHGPGLASSFGYDVTVVDLNGDGWQDIVVGAPQFYMKDGDVGGAAYV
YINQAGRWDKITPVRLNGTKDSMFGLAVENIGDVNQDSYEDIAIGAPYDDGGAGKVFIYH
GSAQGITTGPAQILSGKAHNTRLFGYSLAGNMDLDSNSYPDVAVGSLSDTALIYRSRPVI
SIRRDVKISPKEIDLTAKTCGQSICFTVDACFTWESNTASYNPRLTIGYSIEADGDRRKH
GLTSRVMFLNKSRTETDFQLNGTLDLRGQNQKSCIKITAKLKDNIKDKMRSVPIEVSADI
AGTKRQKARNGLSQLMPILDSSQPSKDVIQVNFVKEGCGRDHVCRSNLKMEYKLYYKQSN
LDVYSPLPVNNNVPVFHLSYERKDLALRVTVSNMNDDDAYEAKLLGTFPDALSYSGVRSH
DRTLEKPIICTANLNGSQAECELGNPFKRDSKATFYIILSTVGMTLHTNEIDINLQLQTT
SVQEDIVPVKVKAKVIIELPLSVSGEASSNQVSFGGVVKGESAMKTEEEIGSLITYTFRI
HNLWKSSVKASLHIQWPKWSKDGKWLLYLVKITAAGPEDVRCSPESEISSLKHVQEASAS
RTRREIGERITVGRMSSMSDKKKVLTCDGEIRCVVLKCPLQGMDGTSLELRSRLWNSTFI
EDYASTPNLHIVVKASLVLHTQAKNMILRTPHTDVTVSVSPEGAVAQHTGVPWWIILVAV
LAGILILALLVFLLWKCGFFKRSKRDDSVPSYHAVRIRKDSPEHQDGKVKLDLLDKKPWM
TNWMDSESYS
NT seq 3273 nt   +upstreamnt  +downstreamnt
atgccgctgccgcagccgggaagacccgccgccgtgtgcgttgcacttttattctattct
ctttttctggagccgactttggtgctcgcgttcaacctggacaccggtcatgtcatcagg
aaggacggagagccggggagtctgttcgggttctccctcgccatgcaccggcaactcaac
ccggataagagaatgctgttgattggagcaccgagagccagagctttggggaaacagaca
gccaacatcacaggaggcctttataaatgtgaaatgactcagtctccccattgtgagcgt
attgaattcgatagtgaagaggacgtacgcgttgagaacaaggagaatcagtggatgggg
gtgacggttcagagccagggacccgggggaaagattgtcacttgtgcccatcgctatcag
aggcgctcgtttgtgaacacgcctctggagtaccgggacatcacggggcgctgttacgtt
ctgagccaggacctgaccatcgactcgctctccgacgaggacggaggtaactggaacttc
tgcaagggcagacccagaggccacgagatgttcggatcttgccaacaaggtttggctgcc
acctttaccaaggactaccattacgtggtgtttggagcaccgggagcgtacaactggaaa
ggcatcgttcgagtggagcaaaagaacaacactttgatagagatgggggtgtacgatgac
ggcccgtatgaagtcggagatgagcatctcttgagcccggagctcgtgcccgtacccgcc
aacagctacctgggattctccctcgactcgggacacggcatcacgaggggccgaggcctg
acggtggtggctggagcgcccagagccaatcacagcggagctgtggtcctgctgaagaag
gagagcgaagcctcctccaggctgttggtggagcacacgctgcacggcccgggactcgcg
tcctcgttcggctacgacgtgaccgtggtcgacttgaacggtgatggatggcaagacata
gttgtgggagcccctcagttctacatgaaggacggagacgttggaggagctgcttacgtc
tacatcaaccaggcaggcaggtgggataaaatcacacccgttcggctaaatgggaccaag
gactccatgttcggacttgcagtggaaaacatcggagacgtcaatcaagactcatacgaa
gacatcgccattggagctccttatgatgacggcggtgcagggaaagtcttcatataccac
ggctctgcacagggaatcacaaccggccctgcacagatcctttcaggaaaagcgcacaac
acgcgactctttggatattctctggcagggaacatggacttggacagtaactcgtatcca
gatgtggctgtgggctccctgtcggacacagctctgatctacaggtcacggcccgtcatc
agcatcaggagagatgtcaaaatatctccaaaggaaatcgacctcacagcgaaaacctgc
ggtcaaagcatttgcttcacggtggacgcgtgcttcacctgggaatcaaacaccgcatct
tacaaccccagactgactatcggctactccatcgaggcggacggagatcgcaggaaacac
gggctgacctccagggtgatgttcctcaacaaatcccgcacggaaacagacttccagtta
aacggcaccttggatctccgcggccaaaaccagaagtcctgcatcaagataacagccaaa
ctaaaagacaacattaaggacaagatgcgcagcgtccccatcgaggtgtctgcagacatc
gccgggactaaacgacagaaggcgaggaacggcctctcgcagctgatgcccatcttagac
tcctctcaaccaagcaaagacgtcattcaggtgaactttgtgaaagagggatgtggaagg
gatcatgtttgccggagcaacctgaagatggagtacaagctgtactacaaacaaagcaac
ctggacgtgtactccccactgcccgtgaataacaacgtgccagttttccatctgagttac
gagaggaaggacttggctctgcgagtgacggtcagcaacatgaatgatgatgatgcttac
gaggcgaagctgctggggacgttcccggacgcgctgtcttattctggagtgcgctcacat
gacagaacgctggaaaagccgatcatctgtacggccaatctgaacggctctcaagcagaa
tgtgagctgggaaatcctttcaagagagactcaaaggctacattttacatcatcctgagc
actgtgggtatgacgctccacaccaacgagatcgacatcaacctgcagctccaaactaca
agtgtgcaagaagacattgtccccgttaaagtgaaggctaaagtaatcattgaattgccg
ttgtcggtcagcggagaagccagttctaaccaggtttccttcgggggtgtcgtgaaaggg
gaaagtgccatgaagacagaggaggagattggaagcttgataacttatacattcagaata
cacaatttgtggaagtcttctgtcaaagcttcacttcacatccagtggcccaaatggagc
aaagacggtaaatggctcctgtacctggtgaagatcaccgctgcaggacccgaggacgtc
cgctgctctcccgagtctgaaatcagctccctcaaacacgtccaggaggcctccgcgtcc
agaacaaggcgtgaaattggagaaagaataactgttggcagaatgtcgtcaatgtcagac
aagaagaaggttttgacatgtgacggtgagatcagatgtgtggtgctcaagtgcccccta
cagggcatggacggaacatcacttgaactgagatcccgtctgtggaactcgacctttatt
gaggattacgcctccaccccaaacttgcacatcgtggtgaaggcctccctcgtcctccat
actcaggctaaaaacatgatcctgagaactccccacacggacgtgacggtgtccgtgtcc
cctgaaggggcggtggcgcagcacaccggagttccctggtggatcatactggtggccgtg
ctcgcaggcatcctgatcctggctttgttggtgtttctgctctggaagtgcggattcttt
aaacgctccaaacgagacgacagcgtcccaagttaccacgcggtgcggatcagaaaggac
tcccccgagcaccaggatggaaaagtcaagcttgatctccttgataagaagccgtggatg
acgaattggatggacagtgaaagttactcgtga

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