Gasterosteus aculeatus (three-spined stickleback): 120834407
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Entry
120834407 CDS
T07457
Symbol
cdhr5a
Name
(RefSeq) cadherin-related family member 5 isoform X1
KO
K16505
cadherin-related family member 5
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gat04515
]
120834407 (cdhr5a)
Cell adhesion molecules [BR:
gat04515
]
Cadherins
Cadherin related
120834407 (cdhr5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
120834407
NCBI-ProteinID:
XP_040058321
UniProt:
A0AAQ4R4J4
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Position
II:21825073..21834689
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AA seq
695 aa
AA seq
DB search
MEPTRRRQPADAVLGCVLAVCLCAVCGAERLCTVPPGPVAVPENNTADVELVKIVSGAEV
ALSVTVNPEDLFYLKGNALMAKKGLDYESLHSAALTVWVQCSKGGSRSVNESVEVLVENE
NDNPPNFAQSHYVLEVNELTPVNSSVGLIEASDVDSEPLFYRLEPATDKYFRLENINTPK
IIVKSILDYDVVQKISLVLHVQDTLDGSASDRPFFTSVATITVQVRDVDNRPPWFQPCLR
TSSGIAKLCVSTGYRGKVNLTEKEDGPLVLEPGPLFARDGDKNRSEQISYRILRGNEGNI
FQIDEETGNISMAKAADIVGPITLTVLASQVTNRDQFSVTQVTFDVMKKSRNPPRFEKER
YEGFIYSNSVPESMILRDRSTNRPFRVRARDEDFATGANPDVKYEVQYSSYVNVTLDGFV
VLKRVVKTESFALQLRAVDATTGESGTAALSVQVIPAVATPSPSSVGYRPGDMALLGLVM
AALLVLCLIVIGFLVSRLWKGNAGMDKICKCLAPCLKSARARSGHRDSLQYTNDGFQTEG
DPRRLTNGPPGRGAFPQARGRVLPMERRGRQCSSCGVHTNHVPKGSPSARPSRRGRWDGD
EEYAKRVALNRQRRKEGQKTVWFKESEDSSDIEVEIIPDTVSPVAEETEEELDMEAVVRD
PAAPLREPEEVQSAQERERGNAGSGKDKEGQEEEG
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggaaccgacacggaggagacaacctgcggacgctgtcctcggatgcgtcctcgccgtc
tgcctctgtgccgtctgtggggccgagagactgtgcacggttcctccgggccccgtcgcg
gtgccggagaacaacacggccgacgtggaactggtgaagatcgtctcgggggccgaggtc
gcgctcagcgtcacggtcaacccggaggacctgttctacctgaaaggaaacgccctgatg
gcgaagaaaggactggactacgagtcgttgcacagcgcggctctgacggtgtgggtgcag
tgcagcaaaggaggctccagatctgtgaacgagtccgtcgaggttttggtcgagaacgag
aacgacaaccccccgaactttgcccaaagccactacgtcctggaagtgaacgagctcact
ccagtgaactccagcgtgggactgatagaagcatccgacgtggactcagagccgctgttc
tatcgcttagagccggcaacggataaatacttccgtctggaaaacatcaacactccaaag
ataattgtgaaaagcatcctggactacgacgtcgtacagaagatctctctggttttacac
gtgcaggacacgctcgacggctcggcctctgaccggcccttcttcacgtccgtggccacc
atcacggtgcaggtgagggacgtggacaaccggcctccctggtttcagccgtgtctgagg
accagctcgggcatcgccaagctgtgcgtgagcaccggctacagaggcaaagtcaatctc
accgagaaggaggacgggccgctggtgctggagcccggcccgctgttcgccagggacgga
gacaagaaccgcagcgagcagatcagctacagaatccttcgaggaaatgagggaaatatt
ttccagattgacgaggagacgggaaacatttcgatggctaaagctgccgacatcgtcggc
ccaataactctcaccgttctggcgtcgcaggtcaccaacagggatcagttctcggtgacg
caggtgaccttcgacgtgatgaagaagagcaggaaccctcctcgctttgagaaggagcgg
tacgaagggttcatctacagcaactccgtccccgagagcatgatcctcagggaccggagc
accaaccgtccgttcagggtccgggctcgggacgaggactttgccaccggggccaatccg
gatgtgaagtacgaggtccagtacagcagctatgtcaacgtgaccttggacgggttcgtg
gtcctaaagagagttgtgaagacagagtcctttgctcttcagctcagagccgtggacgcg
accacgggggagtctgggaccgccgcgctctccgtccaggtcataccagcggtggccacg
ccgtccccctccagcgtgggctaccggccgggcgacatggcgctgctcgggctggttatg
gcggcgctgctggtgctctgcctcattgtgatcggcttcctggtctcccgcctgtggaaa
gggaacgccggcatggacaagatatgcaagtgcctggcaccctgcctgaagtcggcccgg
gcccggtccggccacagggactctctgcagtacaccaacgacggcttccagaccgagggc
gacccgaggcgcttgacaaacggcccgcccggacgcggcgccttcccccaggcgcgaggc
cgggtcctccccatggagaggcggggtcgtcaatgctcctcctgcggcgtccacaccaac
cacgtccccaaggggagcccctcggccaggccgtcccgcaggggcaggtgggacggggac
gaggagtacgccaagagggtcgccctgaaccgtcagaggaggaaggagggccagaagacg
gtgtggttcaaggagagcgaggactcctccgacatcgaggtggagatcatcccggacacc
gtcagcccggtggcggaggagacggaggaggagctggatatggaggccgtggtcagggac
ccggcggcgccgctcagagagcccgaggaggtccagagcgcacaggagcgggaacgcggg
aacgctggctcgggaaaagacaaggaaggccaggaggaggagggctga
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