Gasterosteus aculeatus (three-spined stickleback): 120834480
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Entry
120834480 CDS
T07457
Symbol
usp9
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gat01002
]
120834480 (usp9)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gat04121
]
120834480 (usp9)
Enzymes [BR:
gat01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120834480 (usp9)
Peptidases and inhibitors [BR:
gat01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120834480 (usp9)
Ubiquitin system [BR:
gat04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120834480 (usp9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3517
UCH
UCH_1
FAST_1
Vps23_core
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
120834480
NCBI-ProteinID:
XP_040058433
LinkDB
All DBs
Position
XVI:3432627..3466093
Genome browser
AA seq
2627 aa
AA seq
DB search
MTATTRGSPVGGNDSQGQAPDAQSQPPLPQNQASSPNSSNENSPVSPPDEQGQGDGLPQP
EEEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKCEACQRFF
RDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMATNP
HCKFHIYNGTRPSETVPAGAQLADDELFARPPDPRSPKGWLVDLINKFGTLNGFQMLHDR
FMSGQALNVQIISALIKPFGQCYEFLTLHTVKKYFLPVIEMVPQFLENLTDEELKKEAKN
EAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEVNK
VISSVSYYTHRHNPEEEEWLTAERMAEWIQQNHILSIVLRDSLHQPQYVEKLEKILRFVI
KEKALTMQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNASK
KQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDYSCS
QDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLRKKMPINIQTNLVG
QTQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMETMRQFSKEEQAEFDPQTVRPGSR
YSHVQEVQERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVFLCDREACFKWYSKLMGD
EPDLDPDINKDFFENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDDLE
LIGLDYLWRVVIQGSDDIASRAIDLLKEIYTNLGPKLQVNQVEIHEDFIQSCFDRLKASY
DTLCVLDGDKDSINCARQEAIRMVRVLTVLKEYINECDSDYHEERTILPMSRAFRGKHIT
LIVRFPNQGRQVDDLDIWSHTNDTIGSVRRGILNRIKANAAHTKIELFIGGEVVDPADDR
KLIGQLNLKDKTLITAKLTQVSANMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEVESCLP
GVIMSLHLRYISFLWQVADLGCNLNMPLLRDGARVLMKLMPPDNTTVENLRAVCLDHAKL
GENSLSPSLDSRFFGPSPSQVLYLIEVVYALLMPASATLGEDASDFQYNFLKSGGLPLVL
SMLTRNNFLPSADMETRRGAYLNALKIAKLLLTAVGFGHVKAVAEACQPNAEGNIPVSPI
NQATHDQALVLQSALQNIPNPASECMLRNVAIRLAQQISDEVTENNFFQASKYIPDICVI
RAVQKIVWASGCGTVQLVFSSNEDISKIYEKTNAAKEPDGEDEQVCCEALEVMTLCFALM
PTALDTLSKEKAWQTFIIDLLLHCHSKSVRQMAQEQFFLMATRCCMGHRPLLFFITLLFT
VLGSTAKERAKHAGDYFTLLRHLLNYAYNSNINLPNAEVLLNNEIDWLKRIRDEVKRTGE
TGVEETILEGHLGVTKELLAFQTPEKKYYIGCEKGGANLIKELIDDFIFPASNVYLQYMK
SGEFPTEQAIPVCSTPASINAGFELLVALAVGCVRNLKQIVDTLTDMYYLGCETLTEWEY
LPPVGPRPNKGFVGLKNAGATCYMNSVIQQLYMIPPIRNGILAIEGTGTDVDDDMSGDEK
QENESNVDPRDEVFSYHHQFDDKPSSKSEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPR
GFWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQ
GCPHRYECEESFTTLNVDIRNHQNLLDSMEQYVKGDLLEGANAYHCEKCNKKVDTVKRLL
IKKLPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDDVNPENQ
VIQQNEPSEPTPPGSSKYRLVGVLVHSGQASGGHYYSYIIQRNGGDGEKNRWYKFDDGDV
TECKMDDEEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDSLDKDSEL
VKYISELTISSTKPHQVKMPGVIECSVRKQNVQFMHNRMQYSLEYFQFIKKLLTCNSVYL
NPPPGQDHLLPEAEEIAMISAQLAARFLFSTGFHTKKVVRGPASDWYDALCILLRHSKNV
RYWFAHKVLFAYPNRFSEYLLECPSAEVRGAFAKLIVFIAHFSLQDGPCPSPTASPGPST
QGCDNLSLSDHLLRAVLNLLRREVSEHGRHLQQYFNLFVMYANLGLAEKTQLLKLNVPAT
FMLVALDEGPGPPIKYQYAELGKLYTVVSQLVRCCDVSPRMQSSINDELLSVSPGNPPLP
NPYGDTNLTTPVMPVQQLVAEILFVRTSYVKKIIEDCSNSEETVKLLRFSCWENPQFSST
VLSELLWQVAYSYTYELRPYLDLLLQILLIEDSWQTHRIHNVLKGIPDDRDGLFDTIQRS
KNHYQKRAYQCIKCMVALFSNCSVAYQILQSNGDLKRKWTWAVEWLGDELERRPYTGNPQ
YTYNNWSPPVQSNETSNGYFLERSHSARMTLAKACELCPEELKCTQGSPGKEPDEQEAPD
DQDSSPPEDTSLYPHSPGTAQFQQNNHPHGQPYTGPAAQHMNNPQRPGPASAPTPGPSQT
APGPSPTPGPRAQENWESTEEVAPAPAPTPAPVPTTSTTPAPAQPKE
NT seq
7884 nt
NT seq
+upstream
nt +downstream
nt
atgacggccaccacgcgtggctctccggtgggaggcaatgacagtcagggccaggcacct
gatgctcagagccaacccccattgccacagaaccaggcatcgtctcctaactcatccaat
gagaactctccggtgagcccacctgatgagcagggccagggggacggcctccctcagccg
gaagaggaggagcccgccttccctcacactgacctagccaagctggacgatatgatcaac
aggcctcgttgggttgttccagttttgcctaaaggcgagctagaagtcctcttggaagcc
gctattgatctcagtaaaaaaggactggatgtgaagtgtgaggcctgtcagagattcttc
cgagatggactgaccatctccttcaccaagatcctgacggacgaggcggtcagcggctgg
aagtttgagattcataggtgtatcatcaataacacacaccggttggtggagctgtgtgtg
gccaagctctctcaggactggttccctctactggagctactggccatggccacaaacccc
cactgcaagttccatatctacaacggcacacggccctctgagactgtccctgctggagca
cagctggccgacgacgagctcttcgcccgaccaccagaccctcgctcgcctaagggctgg
ttggtggacttaataaacaaatttggcacgttaaacgggtttcaaatgttgcatgatcgc
ttcatgagcggccaagcactgaacgtccagatcatctctgcacttatcaagcctttcggc
cagtgttacgagttcctcacattgcacacggtaaagaagtacttccttccagtcatcgag
atggttccccagtttctagagaacctcacggacgaggagctgaagaaagaggccaagaat
gaagccaaaaacgacgcactgtccatgataatcaagtctctaaagaatctggcttctcgg
gtaccagggcaagaggagactgtgaagaatttagagatttttagattaaaaatgattctt
aggttattgcaaatttcttcttttaacggcaaaatgaatgcactaaatgaagtgaacaag
gtgatctccagcgtgtcctactacactcatcggcataaccccgaggaggaggagtggctg
actgcggaacgcatggcggagtggatccagcagaaccacatcctctctattgtgctgcgg
gacagtttgcaccagccgcagtacgtggagaaactggagaaaatccttcgcttcgttatc
aaagaaaaggcgcttacaatgcaggacctggacaacatctgggctgcacaggctggtaag
catgaggccattgtgaagaacgtccacgacctcctggccaagctggcatgggacttctcc
cctgagcagctcgatcacctctttgactgtttcaaggcaagctggaccaatgccagcaaa
aagcagcgcgagaaactgctggaacttatccggcgcttggccgaggacgacaaggatggg
gtgatggcccacaaggtcctcaacctgctgtggaacctggcgcacagcgacgacgtacct
gtagacataatggaccaggcacttagtgctcacatcaaaatattagactacagttgctca
caggacagagacacgcagaagattcagtggatagatcgattcatagaggaactacgaacc
aatgacaaatgggtgatccctgccctgaagcaaatcagggaaatctgtagcctctttgga
gaagcccctcaaaaccttagaaagaaaatgccaattaacatacaaacgaacttagtgggt
caaactcagagaagtcctcatgtgttttaccgccatgacctgatcaaccagctacagcat
aaccacgctcttgtcaccctggtggctgagaacctttctgcttacatggagaccatgagg
cagttctccaaagaagagcaggctgagtttgaccctcagacagtcagaccaggaagccgc
tacagccatgtgcaggaagtacaggagcgactcaacttcctgaggtttttgctgaaagac
ggtcagctgtggctgtgtgcccctcaggcaaagcagatctggaagtgtttggctgagaac
gcagtgtttctctgcgacagagaggcctgcttcaaatggtactccaagctgatgggcgat
gaaccagacctggacccggacatcaataaagacttctttgagaacaacgttctacagttg
gacccgtctctgctgacggagaatggcatgaaatgcttcgaaaggttcttcaaggctgtc
aactgcagggagggcaagctagtggcaaagcgcagggcctacatgatggatgacctggaa
ctaataggcttggactacctctggcgggtggtaattcagggaagcgatgacatcgccagc
cgagccatagacctgctgaaggagatctacaccaacctcggaccaaaactacaagtcaat
caggttgaaattcatgaagatttcatccagtcctgttttgaccgtctgaaggcgtcctac
gacacgctgtgtgtgttggatggagacaaagacagcatcaactgcgcccgtcaggaggcc
atccgcatggtgcgagttctcactgtgctcaaagagtacatcaatgagtgtgacagcgat
taccacgaggagaggactatacttcctatgtcaagagccttccgagggaagcatatcaca
ttgatcgtccgcttccccaaccaggggcgccaggtggacgacttggacatctggtcacac
accaatgacacaatcggttcggtcaggcggggcatcctcaatcggatcaaagccaacgca
gcacacacaaagatagagcttttcatcggtggggaggttgttgacccagccgacgacagg
aagctgattgggcagctcaatttgaaggacaaaacgctgatcacggccaagctgacgcag
gtgagtgccaacatgccttcaagcccggacagctcatctgactcgtccactggttcccct
ggtaaccacggtaaccactacagcgatggccctaaccctgaggtggagagctgtcttcct
ggtgtgatcatgtccctgcatctgcgctacatctccttcctgtggcaggtggccgacctg
ggctgcaacctcaacatgccgctgctccgagatggagctcgagttctcatgaaactcatg
cccccagataataccacggtggagaatctgcgagctgtgtgtctggaccacgccaagctc
ggggagaacagcctcagtccctcgttggactctcgcttcttcggcccctcaccctcacaa
gtgctctacctcatcgaggttgtttatgctttgctgatgccagccagtgccactctgggc
gaggacgccagtgacttccagtacaacttcttaaagagtggtggactgccactggtgttg
agcatgctcaccaggaacaacttcctcccatcggcagacatggagacacgccgtggagct
tacctcaatgcgcttaagatcgccaagctcctgcttaccgccgtaggcttcgggcatgtg
aaggctgtggcagaggcctgccagcccaacgccgagggaaatattcctgtctcaccgatc
aatcaggccactcacgaccaggccctggtcctccagagtgccctgcaaaacatccctaat
ccggcctcagaatgcatgctgcgcaatgtagccatccgcctggcccagcagatctctgat
gaggtcacagaaaataatttcttccaggcatcgaagtacatcccagacatctgtgtgatc
cgagcggtacagaaaatagtgtgggcatcaggctgtggcacagtgcagctcgtcttcagt
tcaaatgaagatattagcaagatatacgagaagaccaatgcagctaaggagccagatggg
gaggatgagcaggtgtgttgcgaggccctggaggtgatgactctgtgttttgccctcatg
cccacggctctggacacactcagcaaggagaaggcttggcagaccttcatcattgacctg
ctgctacactgccacagcaaatctgtgcggcaaatggcccaggagcagtttttcctgatg
gcgactaggtgctgtatgggtcatcgacccctcctcttctttatcaccctcctcttcacc
gtgctggggagtacagcaaaggagcgagccaaacatgctggagactacttcactttactt
agacaccttctcaactacgcctacaacagcaacatcaacctgccaaacgctgaggtgctg
ctcaacaacgagatcgactggctgaagcggatacgggatgaggtcaagaggacaggggag
accggtgtggaggagaccatcctggaaggtcacctcggggttaccaaagagcttctggcc
ttccagacaccagagaagaagtattacattggctgtgagaaaggaggagctaatcttata
aaggagctgattgacgacttcatcttcccggcatccaatgtctacctgcagtacatgaag
agtggggagttccccacggagcaggccatcccagtgtgcagcacccctgcctccatcaac
gccggctttgagctcctggtagcactggccgtcggatgcgtccgcaacctcaaacaaata
gtcgacaccctgactgacatgtactacttgggctgcgagacgctgacagaatgggagtac
ctgcctccggtggggccgcggcccaacaaaggcttcgtaggtctgaagaacgccggagcc
acctgctacatgaactctgtcattcagcagctgtacatgatccctccgatccgcaacggc
atcctggccatcgagggcacaggcaccgatgtggatgatgacatgtcgggggatgaaaag
caggagaatgagagtaacgtggatcctcgcgacgaggtgttcagctaccaccatcagttt
gacgataaaccctccagtaagtcggaagacagaaaagagtacaacattggggtacttcgt
cacctgcaggtcatctttggacacctggctgcgtccagacttcagtactatgtccccagg
ggattctggaaacagttcaggttatggggtgagccggtgaacttgcgggagcagcacgac
gcgctggagttcttcaactctttggtggacagtctggacgaagcccttaaagccctgggc
caccccgccatgctgagcaaggtgctgggcgggtcctttgccgaccagaagatctgtcag
ggatgcccccacaggtatgagtgtgaggagtcgttcacaacactcaacgtggatattcga
aaccaccagaacctgctggactcgatggagcagtatgtcaaaggagatcttcttgaggga
gcgaacgcctaccactgtgaaaagtgcaataagaaggtggacacggtgaagcgcctgctg
atcaagaagctgccgcccgtcctggccatccagctgaagcgcttcgactacgactgggag
agggagtgcgccatcaagttcaacgactactttgagttccccagggagctggacatggag
ccgtacacggtagctggtgtggcaaagctcgagggcgacgacgtcaacccggagaaccag
gtgatccaacagaacgagccctccgagcccacgccgcccggcagctccaagtaccgcctg
gttggagtgctggtccactcgggccaggccagcggcggccactactactcctacataatc
cagaggaacggtggggacggcgagaagaaccgctggtacaagttcgacgacggcgacgtg
accgagtgcaagatggacgacgaggaggagatgaagaaccagtgcttcggaggggaatac
atgggcgaggtgttcgaccatatgatgaagagaatgtcgtaccggaggcagaagcgctgg
tggaacgcctatatcctgttctacgagcgcatggactcactggacaaagacagcgagctg
gtcaaatacatctctgagttgaccatctcctccaccaagcctcaccaggtcaagatgccc
ggcgtcatcgagtgcagcgtccgcaagcagaacgtccagttcatgcacaaccgaatgcaa
tacagcctggaatatttccagttcattaagaaacttctgacctgtaacagtgtctattta
aaccctcctccaggacaagaccatcttctgccagaggcagaggagattgctatgataagt
gctcagctggctgctcggttcctcttcagcacaggttttcacactaagaaagtagtccgg
ggtcctgccagcgactggtatgacgccctctgcatcctgctgagacacagtaagaatgta
cgctattggttcgcacacaaagtcctgtttgcttacccaaaccgcttctcggagtacctg
ctcgagtgcccgagcgccgaggtccgcggcgcgtttgccaagctcatagtcttcattgcc
cacttctccctgcaagacgggccgtgcccctcccccaccgcctcgcccggaccctccact
cagggctgtgataacctcagtctaagtgaccatctgttaagagccgttcttaacctgctc
aggagagaggtgtccgaacacggccgtcacctgcagcagtacttcaacctctttgtcatg
tatgccaatctgggcctggcagaaaagacccagctgttgaagctgaatgtccccgctacc
ttcatgttggtcgctctggacgagggtcccggccctcccattaagtaccagtacgctgag
ctgggcaagctctacactgtggtctcccagctggtccgctgctgtgacgtctccccgcgc
atgcagtcctccatcaatgatgaactactttccgtttctccaggtaaccctcccctcccc
aacccgtacggcgacaccaacctgacgaccccggtgatgccggtgcagcagctggtggcg
gagatcttgttcgtgaggaccagctacgtgaagaagatcatcgaggactgcagcaactcc
gaggagacggtgaagctgctccgcttcagctgctgggaaaaccctcagttctcctccacc
gtgctcagcgagctgctctggcaggtggcgtactcctacacctacgagctgaggccttac
ctggacttgctactacagatcctgctcatcgaggactcctggcagacgcacaggatccac
aacgtgctgaaaggcattcccgatgatcgagatgggctgtttgacaccatccagcgctcc
aagaaccactaccagaaacgggcataccagtgcatcaagtgcatggtggccctctttagc
aactgctccgtggcttaccagatcctccagagcaatggtgacctaaaacgtaagtggacg
tgggcggtggagtggttaggggacgagctggagaggaggccgtacacggggaacccccag
tacacctacaacaactggtccccgccagtccagagcaacgagacctccaacggctacttc
ctggagcgttcgcacagcgcacgtatgacactcgccaaggcctgtgaactttgtcccgag
gagctcaagtgtactcagggaagcccagggaaggagccggacgaacaggaagcgcccgat
gatcaagactcgtccccgcccgaggacacctcgctgtacccgcactctcctgggacggcc
cagtttcagcagaacaaccaccctcatgggcagccgtacaccgggcccgctgcccagcac
atgaacaaccctcagcgtcccggtcctgcctccgctccgactcccggcccgtcccagacg
gcccccggccccagtcccactcccggcccacgagcacaagagaactgggagagcacagag
gaggtggccccggccccggctcccacaccggcccccgtgcccaccacctccactacccca
gcgcccgcccagcccaaggagtaa
DBGET
integrated database retrieval system
