Gasterosteus aculeatus (three-spined stickleback): 120834544
Help
Entry
120834544 CDS
T07457
Name
(RefSeq) transcriptional repressor CTCF-like
KO
K23195
transcriptional repressor CTCF
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gat03000
]
120834544
03036 Chromosome and associated proteins [BR:
gat03036
]
120834544
Transcription factors [BR:
gat03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
120834544
Chromosome and associated proteins [BR:
gat03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
120834544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_7th_ZNF462
zf-C2H2_jaz
Zf-C2H2_ZNF451
zf-met
LIM
Zf-C2H2_ZNF451_C
zf-C2H2_6
zf-C2H2_15
zf-C2H2_REST
Motif
Other DBs
NCBI-GeneID:
120834544
NCBI-ProteinID:
XP_040058528
LinkDB
All DBs
Position
II:complement(12009492..12015717)
Genome browser
AA seq
756 aa
AA seq
DB search
MEGEVVSMETTQVADGKVQQDGGEGLIQGAVIATHGEVVDDMGMVVMDALDPTLLQMKTE
VLEGGGTVTVTGGDEGQIITLQVVNMEEQTGAALGLGQLQLVQVPVTRATVEGLQATYVD
ASTANKDADPVICHTLPLPEGFQVVKVGANGEVETVEQEEMEADHDELLEVRGEEEEGAE
EEEEPAEVEATVPLEEDPEWSKDPDYQPISSLRNKGKKGKKSRLRYGEGNRDMDVSVYDF
EEEQQEGMLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSH
TDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHTHE
KPFKCSMCDYCSVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYE
CYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSFLEKGKK
CRYCDAVFHERYALIQHQKTHKNEKRFKCEQCDYCCRQERHMVMHKRTHTGEKPFACSQC
DKTFRQKQLLDMHFKRYHDPNFVPTAFVCSKCNKTFTRRNTMLRHTENCSGEIEEENGTP
APKKARRGRKRKMQTRRDDDDTEDELDEVEEEEELSELEVEQDPPVVPIPAPVEPPVKRK
RGRPPKNKPNTAAIIRVEDEVTGEVDDIIVKKEVGVDRDDQEEATDGAVEEVVVGEGKST
IQLEELPQEAVAAPEVSEAPPNGDLTPEMILSMMDR
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atggagggagaggttgtttccatggagaccacacaagttgctgatggaaaggtccagcag
gacggtggagagggtttgatacaaggggccgtcatagctacacatggggaggtggtcgac
gacatggggatggtggtgatggacgctcttgatccgactctgctgcaaatgaagacggag
gtgctggagggcggcggcacagtgactgttactggcggagatgagggacagatcatcacg
ctgcaggtggtaaacatggaggagcagaccggagcagcgttgggtcttggtcagcttcag
ctggtccaggtacctgtcacaagggcaactgttgaggggcttcaagccacctatgtggat
gcatcaactgctaacaaggacgcagatccggttatctgtcacactcttcccttgcctgag
ggcttccaggtggtaaaagtgggtgccaatggtgaagttgagactgtagagcaagaggag
atggaggcagaccacgacgagcttctagaggtgaggggtgaggaggaggagggggcggaa
gaggaagaagagccagcagaagtagaagccactgtgcctctagaagaagacccagaatgg
tctaaagacccagactaccagcccatcagcagtctacggaataaagggaagaaaggaaag
aagagccgcctgcgctatggagagggcaatcgtgacatggatgtttccgtgtacgacttt
gaagaagagcagcaggaggggatgctgtcagaagtgaatgctgagaaggttgtgggcaac
atgaagccaccaaagcccaccaagatcaagaaaaaaggtgtgaagaagacgttccagtgc
gagttgtgtagctacacctgtcctcggcgctccaaccttgaccgacacatgaagagccac
acagatgagcgaccgcataaatgtcacttgtgtggacgagcatttcgaactgtcacactg
ctgagaaaccacctcaatacacacacaggcactaggccacacaagtgtacagattgtgac
atggcgtttgtgaccagcggtgagttggtgcgtcaccgtcgctacaaacacacgcacgag
aagcccttcaagtgctccatgtgtgactattgcagcgtggaggtgagtaagttgaagagg
cacattcgctctcacactggggagcgacccttccagtgcagtctgtgcagctatgctagc
agagacacttacaagctgaagaggcacatgaggacgcactcgggtgaaaagccgtacgag
tgctacatctgccatgcccgcttcacacaaagcggcaccatgaagatgcatattctgcag
aaacacacagagaacgtggccaagttccactgcccacactgtgatactgtcatcgcacgc
aaaagtgacctgggtgttcacctgcggaagcagcactcgtttcttgagaagggaaagaaa
tgccgttactgcgacgctgtgtttcacgagcgttacgctctcatccaacaccagaagacc
cacaagaacgagaaacgcttcaagtgtgagcagtgtgactactgctgcagacaggagcgc
cacatggtaatgcacaagcgtacccacactggggagaagccgtttgcctgcagtcagtgt
gataaaacctttaggcagaagcagctcctggacatgcacttcaagcgctaccacgatccc
aactttgtgccaacggccttcgtttgcagcaagtgcaacaagacgttcacccgcaggaac
accatgcttcgccataccgaaaactgctcgggtgagattgaagaagagaatggaactcct
gcccccaaaaaggctcgtcggggcaggaagaggaagatgcagaccaggagggacgatgat
gatacagaagatgagctggatgaggtagaggaggaagaggagctgagtgagcttgaggtg
gaacaggacccaccagttgtccctataccggcccccgtggagccaccagtcaagaggaaa
cgtggacggcccccaaagaataagccaaacacggctgccatcatccgcgtggaggacgag
gtcactggagaagtggatgacataatcgtgaagaaagaggttggagtcgatcgcgatgac
caggaggaggccactgatggggctgtagaggaggttgtggtcggtgaagggaaatccacc
atccagctggaggagttgccccaggaagcggtggcggcaccagaggtgtctgaggcccca
ccgaacggagacctcactcccgagatgatcctgagcatgatggaccggtga
DBGET
integrated database retrieval system
