Gasterosteus aculeatus (three-spined stickleback): 120834579
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Entry
120834579 CDS
T07457
Symbol
mars1
Name
(RefSeq) LOW QUALITY PROTEIN: methionine--tRNA ligase, cytoplasmic
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat00450
Selenocompound metabolism
gat00970
Aminoacyl-tRNA biosynthesis
gat01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
120834579 (mars1)
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
120834579 (mars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gat01007
]
120834579 (mars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gat03016
]
120834579 (mars1)
Enzymes [BR:
gat01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
120834579 (mars1)
Amino acid related enzymes [BR:
gat01007
]
Aminoacyl-tRNA synthetase
Class I (U)
120834579 (mars1)
Transfer RNA biogenesis [BR:
gat03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
120834579 (mars1)
Prokaryotic type
Other AARSs
120834579 (mars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
GST_N_5
Anticodon_3
WHEP-TRS
tRNA-synt_1
GST_C_3
GST_C_2
GST_C
GST_C_5
GST_C_6
Motif
Other DBs
NCBI-GeneID:
120834579
NCBI-ProteinID:
XP_040058580
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All DBs
Position
XVII:5895275..5910971
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AA seq
936 aa
AA seq
DB search
MKLFVSEGNPHCLKVLAALEVTGVHCDVQNVNHEERVVPFLSRPALPALLLTSGLHLFSP
NAICRYLFEVSGQACSELCNRWLEWEATDLQPALLQSLHMAVLQGKGSEVSKVLQGSLNY
MEQSLSKGNTPYLTGDAVSVADVVLWAALYPILSDSSLALGKHASVKAWFDRGAVMHSCQ
SAAQKVLQGKGLQGMKSFMQRQPALQSSPCRDTQPCNGNPAEEEESERAVSVEEMEAAAL
TWSQGLSSSPLAADRRHPILPQQGKRNLLVTSALPYVNNVPHLGNIIGCVLSADAFSRYG
RLRGWNMLYVCGTDEYGTATENKAREEGLTPQQICDKYHAIHSSIYKWFQIDFDFFGRTT
TEKQTEIAQNIFWKVHQHGFLLEDTVEQLRCENCKRFLADRFVEGICPHCSYPEARGDQC
DKCGRLINAVELSHXRLSPFRNPQCKVCRQTPVVRSSKHLFLDLPKLEAQLEQWLDKSTS
TGDWTANAKQITRSWLRDGLKPRCITRDLRWGTPVPHPDFKEKVFYVWFDAPIGYLSITA
NYTDQWEKWWKNPSQVELYNFMAKDNVPFHSVVFPCSLLGAQDNYTLVNHLIATEYLNYE
DTKFSKSRGVGVFGDMAMDTGIPPDVWRFYLLYVRPEGQDSAFSWADMALKNNSELLNNL
GNFINRAGMFVTKFFEGSVPAMELQQEDKKLLALVGWELQQYIQLMDKVKIRDALRHILN
ISRHGNQYIQVNEPWKKIKGGETEKQRAGTVTGVSVNIACLLSVMLLPYMPAVSQTIRDQ
LNAPQSCVNTMLQGTGTFVCCLSAGHRIGTVSPLFQKLEVDQIEALKKRFGGQQPEDEPP
RKKMTAPSAASAPPAAVPAAAAAAEVASVNGADPEKAKQLTQAVAEQGEKVRALKAQKAE
KAVITAEVAKLLDLKKQLAVAEGKSAEPAPQKGKKK
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcttcgtcagtgaaggcaacccgcactgcctcaaggtgttagccgcactagaa
gtgaccggagttcattgtgacgtccagaatgtcaaccacgaagagagagtggtgcctttc
ctcagccgtccagccttgccggcgctgctcctgaccagcggtctgcaccttttcagtcct
aatgccatctgccgatacctgtttgaagtaagtggacaagcctgcagtgagctttgcaat
cggtggctggaatgggaggccacagatcttcagcctgcactgctacagtctcttcacatg
gcagtactgcaggggaaaggttcagaggtgtccaaggtcctccaagggtctctaaactac
atggagcaaagcttgagcaaagggaacacgccgtatttaaccggggatgcagtttcggtt
gctgatgttgttttgtgggctgcgctgtatcccattttgtctgactcttcactagcattg
ggcaagcacgcgtctgtaaaggcttggtttgaccgcggggctgtcatgcacagttgccag
tctgctgctcagaaagtgctgcagggaaaaggcctgcagggcatgaagagcttcatgcag
aggcagcctgcccttcagagcagcccgtgcagagacacgcagccatgcaacggcaaccct
gctgaggaggaggaaagtgagcgcgcggtgtccgtcgaggagatggaggcagctgctcta
acctggagtcaaggtttgagctcctctccattggctgcagaccgacggcaccccatttta
ccacagcagggcaagcgaaaccttcttgtgaccagcgccttgccttatgtcaacaacgtc
ccccacctgggcaacatcattggctgcgtcctcagcgctgatgccttcagcagatacggc
cgtctgcgaggctggaacatgctgtatgtctgtggcacagacgagtatggcaccgcaaca
gagaacaaggccagagaggaaggtttgacgccccagcagatctgcgacaagtaccatgcc
attcactccagcatctacaagtggttccagattgactttgacttttttggcagaaccact
accgaaaagcagactgagattgcccagaatattttctggaaagtccaccagcatggtttc
cttttggaagacaccgtggagcagctgcgctgtgagaactgcaagcgcttcctcgccgac
cgcttcgtagagggcatctgtccccactgcagctacccagaagctcgcggtgaccagtgt
gacaagtgtgggcggctcatcaacgccgtggagctgagtcattgacggttgtcccctttc
aggaacccccagtgtaaagtctgcaggcagactcccgttgtacgctcctccaaacatctt
ttcttggatctgccaaagctcgaggctcagttggagcagtggcttgacaagtcaaccagc
acaggagactggacagcaaatgccaaacagatcactcgctcctggctgagagatggcctc
aaacctcgctgcatcaccagggacctgcggtggggaacgccagtacctcatcccgacttt
aaagagaaggtgttctatgtgtggtttgacgcccccattggttatctgtccattaccgcc
aactacactgaccaatgggagaagtggtggaagaatccgagtcaggtggagctgtacaac
ttcatggccaaagacaacgtgccattccacagtgtggtgtttccctgctccctactggga
gcgcaggacaactacactctggtcaaccacctcattgccactgagtatctgaattacgaa
gacacaaagttctccaagagccgcggcgtgggtgtgtttggagacatggccatggacacg
ggcatcccgcccgacgtgtggcgcttctacctcctctacgtgcgcccagagggacaggat
tcagccttctcctgggccgacatggctctgaagaacaactctgagctgctcaacaacttg
ggcaactttatcaacagagccggcatgttcgtcactaagttctttgagggcagtgtgcct
gcgatggagctccagcaggaagataagaagctcctggctctggtgggctgggaactgcag
caatacatccagctaatggacaaagtcaaaatccgcgatgctctgagacacatcctcaac
atctcccgccatggcaaccagtacattcaggtcaacgaaccctggaagaagatcaaggga
ggggagactgagaagcagcgtgcgggcacggtcaccggtgtgtccgtgaacatcgcctgc
ctgctgtcggtgatgctgctgccgtacatgccggctgtgagccagaccatcagggatcaa
ctcaatgcccctcagtcctgcgtcaataccatgttgcagggcactggcacctttgtctgc
tgcctgagtgccggccaccgcatcggcactgtcagtccgttgtttcagaaactggaggtg
gaccagattgaggctttgaagaagagatttggtggacagcagcctgaagatgaaccacct
agaaaaaagatgaccgctccgagtgctgccagcgctccgcccgccgccgtgccggcagcc
gccgccgccgccgaggtggcttcggtgaacggagcggacccagaaaaagccaagcagctc
acgcaggctgtggctgagcagggggaaaaggtgcgagcactcaaagcccagaaggcggag
aaggccgtgatcaccgcagaggtggccaaactgttggaccttaagaaacagctggctgtg
gctgaggggaagagcgcggagcctgcacctcagaagggcaagaagaagtga
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