Gasterosteus aculeatus (three-spined stickleback): 120834761
Help
Entry
120834761 CDS
T07457
Symbol
hcfc1a
Name
(RefSeq) host cell factor 1a isoform X1
KO
K14966
host cell factor 1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03083
Polycomb repressive complex
gat04980
Cobalamin transport and metabolism
gat05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
120834761 (hcfc1a)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
120834761 (hcfc1a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120834761 (hcfc1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gat01009
]
120834761 (hcfc1a)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gat03036
]
120834761 (hcfc1a)
03029 Mitochondrial biogenesis [BR:
gat03029
]
120834761 (hcfc1a)
Protein phosphatases and associated proteins [BR:
gat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120834761 (hcfc1a)
Chromosome and associated proteins [BR:
gat03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
120834761 (hcfc1a)
HMT complexes
COMPASS/SET1 complex
120834761 (hcfc1a)
MLL-HCF complex
120834761 (hcfc1a)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
120834761 (hcfc1a)
Mitochondrial biogenesis [BR:
gat03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
120834761 (hcfc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_4
Kelch_1
Kelch_6
fn3
Motif
Other DBs
NCBI-GeneID:
120834761
NCBI-ProteinID:
XP_040058945
LinkDB
All DBs
Position
XVII:complement(16181292..16194265)
Genome browser
AA seq
1931 aa
AA seq
DB search
MKDWIIMSAPGSAVSGTTASVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNE
GIVDELHVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYEL
QASRWEWKKLKAKNPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDL
YTLELRAGSSVVGWDMPITYGVLPPPRESHTAVVYTEKTSRKSRLIIYGGMSGCRLGDLW
TLDIDTLTWNKPSVNGTAPLPRSLHSATTITNKMYVFGGWVPLVMDDVKVATHEKEWKCT
NTLACLNLDSMCWETVLMDTLEDNIPRARAGHCAVAINSRLYVWSGRDGYRKAWNNQVCC
KDLWYLETERPHAPARVQLVRANTNSLEVSWGAVSTADTYLLQLQKYDIPATPAAASPVM
SASPVQPLNSPKSPAPAAAATSTQSLPQTAVLKVAAQQSATGTSVVTVRPSQPGKSPVTV
TSLPPGVRMVMPAQPTQGSPIGSSPQMSGMAALAAAAAATQKIPPSSAGTVLNVPAGATI
LKTVAVSPGTTTMKMASPLMVSNPATRMLKTAAAQVGTGTASSPTNTRPIITVHKSGAVT
VAQQAQVVTTVVGGVTKTITLVKSPLTMGSGGTLISSLGKMMSVVQTKPVQTSAITGQAS
TNPLTQLIQTKGPLPAGTILKLVTSADGKPTTIITTSQAGGTGNKPHILNISGVSPSTTK
QGTTIIKTIPMSALMSQSGATGLNSRVTSSGGMKSPITILTTKVMTTGTPGKIITAVPKL
GTAAGQQGLTQVVLKGAPGQPGTILRTVPMSTVGGVRLVTPVTVSAVKPTVTTLVVKGTT
GVTTLGTVTGTVSSSLAGATVDSSNASLATPITTLGNIATLSSQVINPAAITVSAAQTNL
TSVSTLPSSTMAVQNQPTQVTLITTPSGVEAQPVQDLPVSILASPTSEQPSSSEAGAAGD
GSGTVTLVCSNPPCETHETGTTNTATTSSAAMGAGQVCSNPPCETHETGTTNTATTASAA
MGAGQVCSNPPCETHETGTTNTATTASSNMSAPRMCSNPPCETHETGTTNTATTASANMG
EVQQQCSNPPCETHVTGTTNTATQSASNMNTSETTTTARRACSNPPYETHETGTSNNQST
TDMEGNQTSTSTGQVQGVCSNPPDETHETGTTNNQSTSNLEGNQTSASTGQVVRVCSTLP
YETHKTGTTNSQSTATSNMGSDQTSTSTGKAQRACSNPPYEAHETGATNNQSTSNTEGNQ
TSTSTGQVQRVCSNPPCETHETGTTNSQSTSASNMGSDQTSTSTGQVQRVCSNPPCETHE
TGTTNSQSTSASNMGSDQTSTSTGQAQRVCSNPPCETHETGTTNTATTATCNMETGEGTA
QQTEEGAESTSSPEVDATAAAAAPAPVPIPPTTAAAAAPAAGMVTTTQGRAITTVTQSTP
APGPSVPSISSIAEGVSTAASSTEEPMQTDETASADAAAVEEGASAMETQAEGEAATAAT
LNLPSELMSEGQGATLMVTGLSDEELAVTAAAEAAAQAAATEEAQALAIQAVLQAAQQAV
MNEGDSTGENQQPTSIPIMLTQQELAALVHQQQQLQMQEAQAAAQQASVDASLPTEGLAP
ADSLNDPSVESNGHNEMAAAVTSAVASLLPRPTAETLAPSSTFAPSVSVASPAKLQAAAA
LAEVANGIEGEKQAPQPTPVKPVVKKENQWFDVGIVKVTNMVVTHFYMPGDSSQGDDDSG
VMPDYGQMKKMELQPGTAYKFRVAGINACGRGAFSEISAFKTCLPGFPGAPCAIKISKSP
DGAHLTWEPPSVTSGKIIEYSVYLAIQSNQTAEAKASTPAQLAFMRVYCGPNPSCLVQSS
SLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQESGKDAASAKPAAKRPGTSPDTK
STGPKKARTDQ
NT seq
5796 nt
NT seq
+upstream
nt +downstream
nt
atgaaagattggataatcatgtctgcccctggctccgcggtgtctgggaccacggcgtcg
gttctgcagccgcggtggaaacgggtcctcggatggtccggtcccgttccccggcccagg
catgggcacagagctgttgctataaaggagcttatggttgtctttggcggtggaaacgag
gggattgtggatgaactacatgtatacaacaccgctacaaaccagtggtttatcccagcg
gttcgtggcgatattccccctggttgtgctgcatatggttttgtctgtgatggcactaga
ttgctggtttttggtggaatggtggagtatggaaagtacagcaacgacctctacgaactg
caggccagcagatgggaatggaaaaagttgaaagcaaaaaacccaaagaacggtccccct
ccttgtcctcgtcttggccacagtttctcgctagttggcaacaaatgctacctgtttggt
ggactagccaatgacagcgaagaccccaaaaacaacattcccagatacctgaatgacctg
tacacacttgagctccgcgcaggctccagtgtggtaggatgggacatgccaatcacatat
ggcgttctgcctcctcctcgggagagccacactgctgttgtatacacagaaaagacgagc
aggaaatctcgcctgataatctatggagggatgagtggttgtcgccttggggatctgtgg
acacttgatattgataccctgacatggaacaaaccatcagtgaacgggacagcaccgctc
cccagaagtcttcactctgccaccaccatcacaaacaagatgtatgtttttggaggatgg
gttccattggtaatggatgatgtcaaagtggccacacacgagaaggagtggaagtgcacc
aacactcttgcctgcctaaatctagactccatgtgttgggagaccgtgttgatggatacc
ctcgaagacaacatccctcgggcccgtgctggccactgtgccgtggccatcaattctaga
ctctatgtatggagcggccgcgacggttatcgtaaagcctggaacaaccaagtctgttgt
aaagacctctggtacctggaaacagagcggccacatgcccctgctagggtgcagttagtt
cgtgccaacacaaactcccttgaagtgagctggggcgcagtctcaactgctgacacctac
ttactgcagctgcagaaatatgacatccccgcaactccagctgcagcctcgccagtcatg
agtgccagtcccgtgcagcctttgaactctccaaagagccctgcaccggctgcagcagca
acctctactcaaagcttaccccagacagctgtcttgaaggttgcagctcaacagtctgcc
acaggcacgtctgttgtcacggtccgccccagccagcccgggaaatcccccgtcactgtg
acatcccttccaccaggtgtccgtatggtgatgccggcgcagcccacccagggatcgcca
attggtagtagccctcagatgagcggcatggcagctttggctgcagcagctgccgcaaca
cagaagatcccaccctcttctgcaggaactgtcctaaatgttcctgcaggggccaccatt
ctcaaaacagtagctgtttcgcctggcacaaccacaatgaaaatggcttctccactcatg
gtcagtaacccagctactcgaatgctgaaaacagctgcagcccaggtgggaacagggact
gcgtcctctcccaccaacaccagacccatcatcactgtgcacaagtctggtgcagtcaca
gtggctcagcaggcccaggtggtaaccacagtggtgggtggggtcaccaagacaatcacc
ctggtcaagagtcccctcaccatggggagtggcggcacactgatctccagccttggcaag
atgatgtccgtggtacaaaccaagccagtgcagacatcagctatcacaggccaggcgtcc
actaaccctctaacacagctcatacagacaaagggtcccctcccagccggcaccatccta
aagctggtgacctccgctgatggcaagcccaccaccatcatcaccacttcccaggcagga
ggcacaggaaacaagcctcatatcctcaacatcagcggcgtctctcctagcaccactaag
cagggcaccaccatcatcaagaccatccccatgtcagctctcatgtcccagtcaggagct
acaggtctaaactcacgtgtgaccagcagtggaggcatgaaatcaccgatcacaatcctc
accacaaaggtgatgaccaccggtacccctggcaaaatcatcactgcagtgcccaaactc
ggcactgcagccggccaacagggactgacacaggtggttttgaaaggtgcgccggggcaa
cctggcactattttgcgcaccgtgcctatgagcacagtcggtggtgttcgacttgttacg
ccagtgaccgtatctgccgtcaagcctactgtcaccactttggttgtcaagggaaccact
ggtgtcaccactcttgggacagtcactgggacggtctcctcaagtctggcaggagccacg
gtggacagttcaaacgcctctctggccacccccatcaccacactgggaaacatcgctacc
ctgtccagccaggtcatcaacccagctgccataaccgtttcagctgctcagaccaacctg
acttctgtctccacgttgccctcgtctaccatggcggtgcaaaaccagcccacccaggtg
actttgatcacaactcccagtggagtagaagctcaaccggtacaggatctaccagtgtcc
atccttgcttcaccaacctccgagcagcccagctcttctgaggctggagcagctggcgac
ggctctggaactgtcaccctggtctgctccaaccccccatgtgagacccacgaaacagga
actaccaacaccgcgaccacctcatcggccgccatgggagccggacaggtctgttctaac
ccgccctgcgagactcacgagaccggaaccaccaacacagccaccaccgcctctgctgct
atgggagcaggacaggtgtgttccaacccaccgtgcgagacccacgaaaccggcaccacc
aacaccgccacaactgcgtcatcaaacatgtccgcgccacgcatgtgctccaacccaccg
tgcgaaacccatgaaaccggaacaaccaacacagccaccacagcgtcggctaacatggga
gaagtccagcagcagtgctccaacccaccatgtgagacccacgtgaccggcaccaccaac
acagccacccagtcggcatctaacatgaacacgagcgagacgacgacaaccgcgcggagg
gcgtgctccaacccgccctacgaaacacacgagactgggacctccaacaaccagtccacc
accgacatggaaggcaaccagaccagtacgtccacgggccaggtccagggggtgtgctcc
aacccacctgacgaaacacatgagactgggaccaccaacaaccagtccacctccaacctg
gaaggcaaccagaccagtgcatcgaccggccaggtggtgagggtgtgctccaccctgccc
tacgaaacacacaagactgggaccaccaactcgcagtccacagccacctctaacatgggg
agcgaccagaccagtacatccacaggcaaggcccagagggcgtgctccaacccgccgtac
gaagcacacgagactggggccaccaacaaccagtccacctccaacacggaaggcaaccag
accagcacatccacaggccaggtccagagggtgtgctccaacccgccctgcgaaacgcac
gagactgggaccaccaactcccagtctacatccgcctccaacatgggaagcgaccagacc
agtacatccacgggccaggtccagagggtgtgctccaacccgccctgtgaaacgcacgag
actgggaccaccaactcccagtccacatccgcctccaacatgggaagcgaccagaccagt
acatccacgggccaggcccagagggtgtgctccaacccgccctgtgaaacgcacgaaacg
ggtaccaccaacacagctaccactgccacctgcaacatggagactggcgaaggcaccgcc
cagcagacagaggagggagcagaaagtaccagcagcccagaagttgatgccactgctgcc
gccgccgcccccgcccccgtccccatcccccccaccactgctgcagcagcagcaccggca
gctggcatggttaccacaactcagggcagggccatcactactgtcactcaatcaacacca
gcccccggaccctctgtgccttcgatctcatcaatcgcagagggagtgagtactgctgcc
agctccacagaggaacccatgcaaactgatgagacggcatcagcagatgctgcagctgta
gaggagggagccagcgctatggagacacaagcagagggagaagcagccaccgctgccacc
ttaaatctgccctcagagctgatgtctgagggtcagggcgccactctcatggtgacgggg
ctgtcggacgaggagctagctgtgactgcagcagcggaggccgctgcacaggcagcagcc
actgaagaagcccaggccctcgctatccaggctgtcctccaggccgcccagcaagcagta
atgaatgagggtgattccactggagagaaccagcagcccaccagcatccccatcatgtta
acccaacaggagctcgcagcgctggtccatcagcagcagcagctgcagatgcaggaagct
caggctgcagcccagcaggccagcgtggacgcaagtttgcccactgagggcctcgccccc
gccgacagcctcaacgacccctcggtcgagagcaacgggcacaatgagatggccgcggcg
gtcaccagcgccgtagcatcactgctccctcgtcccaccgctgagacactcgctccatca
agcacgtttgcgccctctgtgtcggtggcgagtccggccaagctacaagcagcggccgct
ctagcggaggtcgccaacgggatcgagggggagaagcaagctcctcagccaaccccagtg
aagcccgttgtaaagaaagagaaccagtggtttgatgttggaattgtgaaagtgacaaat
atggtggtcacccacttctatatgccaggagacagttctcaaggagatgatgactctggc
gtcatgcccgactacggccagatgaagaagatggagctgcagcccggcacggcttacaag
ttccgcgttgccggaatcaacgcttgtggccgcggggctttctctgagatatctgccttc
aagacctgcctaccaggcttcccaggggcaccttgcgccataaaaatcagcaagagcccg
gacggtgcccacctgacctgggagccgccctctgtgacgtcggggaagatcatcgagtac
tccgtgtacctggccatccagagcaaccagacggccgaggccaaggcctccaccccggcc
cagctggccttcatgcgcgtgtactgtggacccaacccgtcttgcttggtgcagtcgtcc
agcctctccaacgcccacatcgactacaccaccaagccagccatcatcttccgcattgcg
gcccgcaatgagaaaggctacggtcccgccacccaagtccgatggctgcaagaatctggc
aaagacgccgcctctgcaaaaccggccgccaaaagaccaggcacctctcctgataccaag
tctactggtccaaagaaagcaaggacggaccagtga
DBGET
integrated database retrieval system
