Gasterosteus aculeatus (three-spined stickleback): 120834802
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Entry
120834802 CDS
T07457
Symbol
rae1
Name
(RefSeq) mRNA export factor isoform X1
KO
K14298
mRNA export factor
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120834802 (rae1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gat03019
]
120834802 (rae1)
03036 Chromosome and associated proteins [BR:
gat03036
]
120834802 (rae1)
Messenger RNA biogenesis [BR:
gat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120834802 (rae1)
Chromosome and associated proteins [BR:
gat03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
120834802 (rae1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_WDR3_1st
WDR55
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
EIF3I
WD40_Gbeta
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_1st
WD40_RFWD3
Beta-prop_Aladin
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_ACSF4
Beta-prop_RSE1_2nd
Beta-prop_SPT8
NBCH_WD40
Beta-prop_Nup120_160
ExoI_SH3
Beta-prop_WDR41
Motif
Other DBs
NCBI-GeneID:
120834802
NCBI-ProteinID:
XP_040059018
LinkDB
All DBs
Position
XVII:complement(15561685..15566056)
Genome browser
AA seq
369 aa
AA seq
DB search
MSLFGATSGFGAAGAGVFGSATTDSHNPMKDVEVTSPPDDSISCLAFSPPTMPGNFLIGG
SWANDVRCWEVQDNGQTVPKAQQMHTGPVLDACWSDDGSKVFTASCDKTAKMWDLNSNQA
LQIAQHDGPIKSIHWIKAPNYSCIMTGSWDKTLKFWDTRSPNPMMSLQMPERSYCADVVY
PMAVVATADRGLIVYQLENQPSEFRRIDSPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTTTPQDIYAVNAISFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPITACCFNSNGNIFAYASSYDWSKGHEYYNPQKKNYIFLRSAAE
ELKPRNKKW
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgagtttatttggggcaacctccgggttcggagcagcgggtgccggtgtgtttgggagc
gcaacgacagacagccacaatcccatgaaggatgttgaggtgacttcccctccagatgac
agcatcagctgcctggctttcagtccccccaccatgccagggaacttcctcattggaggc
tcctgggccaacgatgtccggtgttgggaggttcaggacaatgggcagactgtacccaaa
gcccaacagatgcacaccggcccggtgctggatgcatgctggagtgacgatgggagtaag
gtcttcactgcctcttgtgacaaaaccgccaagatgtgggatcttaacagcaatcaagct
ttgcagattgcacagcatgacggcccgatcaaatccatccactggataaaagctccgaac
tacagttgtatcatgaccggcagttgggacaaaacgctgaagttttgggacacccggtct
ccaaatcccatgatgtctctgcagatgccagagagatcctactgtgccgacgttgtgtac
cccatggctgtggttgccacagccgatagaggcctgatagtgtaccagctggagaaccag
ccctctgaatttcgcagaatagattctcctctcaaacatcagcaccgctgtgttgccata
ttcaaggacaagcagaacaagcccaccggctttgcactgggaagcattgagggccgtgtg
gccatccattatatcaaccctccaaatccggccaaagataacttcacctttaagtgtcac
aggtcaaatggaaccaacacgacaactccacaggacatctacgccgtgaatgccatctcc
ttccaccctgtccacggcactctggctactgtgggctcagatgggcgcttcagcttttgg
gacaaagacgcacgcacaaagttgaagacctcagagcagctcgaccagcctattacagcg
tgctgcttcaacagcaacggcaacatctttgcgtatgcctccagttacgactggtcaaag
ggccatgagtactacaacccccagaaaaagaactacatcttcttgaggagtgctgccgag
gagctgaagccccggaacaagaaatggtga
DBGET
integrated database retrieval system
