Gasterosteus aculeatus (three-spined stickleback): 120834809
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Entry
120834809 CDS
T07457
Symbol
shq1
Name
(RefSeq) LOW QUALITY PROTEIN: protein SHQ1 homolog
KO
K14764
protein SHQ1
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gat03009
]
120834809 (shq1)
Ribosome biogenesis [BR:
gat03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
120834809 (shq1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHQ1
SHQ1-like_CS
Lipid_DES
DUF5063
Motif
Other DBs
NCBI-GeneID:
120834809
NCBI-ProteinID:
XP_040059029
LinkDB
All DBs
Position
XVII:19361440..19380170
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AA seq
568 aa
AA seq
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MITPAFDLSQDPDFLILSLRVPYTRTSEFDLYIDGTDFKFFAKPYFLRLSLPGRIVEDGR
ETAKFDIDAGLVTLRVPKETAGEHFEGLQMLTSLLAPKGARSAKPLIEDLSAGGGEGAGG
NEDDDDDFDWQMEQEVHRERSEEELGALQKYGFGNQRCGVFARLQEELSDVIDLKNPEGA
TADERRRGRLDAEVSAFSPDHYLADLFEDAEIKELLKFRPWWDKLSPTEQGGQAAVSFTD
DEKEQLRKFTNRSYLLDKASRHQAWLSLVDILLAYCYEARSTEGEHNVESPWTIRKLSGT
LCWLETYSSLHDVLLSFARRVLCYPLYRHFALASAAVRDATKILQTGKAGVLRCLLDIHR
VFRENDPAYILNDLYITDYCVWIQRVKSKKTSALAEDVTARLPAIXYSGLDLEELEEAAT
IVAEEEEEEEEEDGAASDCDPISHSSSSSGDSSGESEESEAEGQSCTESKEGGGGAEGGG
TSKDNPPQPPPALAASPVPRAPASTLPSASQGSRLLIQELGEQMQEELRISSRHGAERTS
GSVGGTLLEPSRNPLLIVATREESDVVL
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgatcactcctgccttcgacctgagccaggatcccgacttcctgatcctcagcctccgt
gttccctacaccagaacgtcagagttcgacctttacatcgatggaacagatttcaagttc
ttcgccaagccctacttcctcagattgtctcttcctggcagaatagtggaagatgggagg
gaaacggccaagtttgacattgatgctggtctcgtcactctccgggtcccaaaggaaaca
gctggagagcactttgaagggctccagatgctgacgagtctcctcgcccccaaaggcgcc
cgctcagcaaaaccactgatcgaggacctgagcgcaggaggcggcgagggcgccggaggt
aacgaggacgacgacgacgactttgactggcagatggagcaggaggtgcacagggagcgc
tccgaggaggagctgggcgctctgcagaagtacggctttggcaaccagaggtgtggagtg
tttgccagattacaggaggagctgagcgacgtgatcgacctgaagaacccagagggagcg
acggccgacgagaggaggcgagggcggctcgacgcagaggtgtccgccttctcccccgac
cattacctggccgatttgtttgaggatgctgagataaaggagctgctgaagttcaggccg
tggtgggataagctgagtcccacagagcagggcgggcaagcggcggtttctttcaccgat
gacgagaaggagcagctgaggaagttcaccaaccgctcgtacctgctggacaaggcgtcc
cgtcaccaagcgtggctcagccttgtggacatcctgctggcctactgctacgaagcgcgc
tccacggagggcgagcacaacgtcgagtccccgtggaccatcagaaaactcagtgggact
ctctgctggctggagacttacagctcgctgcacgacgtcctgctgtcgtttgcacggagg
gtcctgtgctacccgctctacagacacttcgcactggcgtccgcggctgtccgggacgca
actaagattctgcagacagggaaggccggcgtcctcaggtgcctgctggatatccacaga
gtgttccgggagaacgacccggcctacatcctgaacgacctgtacatcaccgactactgc
gtctggatccagagggtcaagtccaagaagacgtcagcccttgccgaagacgttacagca
cgcctgcctgcgatataatattcggggctggatctggaggagctcgaggaggcggcaact
atcgtggccgaggaagaggaggaggaggaagaagaagatggagcagcctccgactgcgat
ccgatatcccacagcagcagcagcagtggtgactcgtctggcgagagcgaggaatcagag
gctgaagggcaaagctgcaccgaatccaaggagggagggggcggagcagaaggagggggg
acgtctaaggacaaccctccgcagcccccacccgccctggctgcatcccccgtcccccgg
gcgcccgcgagcaccctcccctctgcctcacagggctcccgcctgctgatccaggagctg
ggggagcagatgcaggaggagctgaggatctccagccgccacggagcagagagaacgtcg
gggagcgtcggcggcactttgttggagccgagcagaaacccgctgctcatcgtggcaacg
cgggaggagagcgacgtggtcctctga
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integrated database retrieval system
