Gasterosteus aculeatus (three-spined stickleback): 120834828
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Entry
120834828 CDS
T07457
Name
(RefSeq) RNA-binding protein 39-like
KO
K13091
RNA-binding protein 23/39
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gat03041
]
120834828
Spliceosome [BR:
gat03041
]
Common components
Common spliceosomal components
General mRNP proteins
120834828
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_MUD2_C
RRM_occluded
RBD_DEAH11
RRM_5
RRM_7
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
120834828
NCBI-ProteinID:
XP_040059062
LinkDB
All DBs
Position
17:1045492..1050094
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AA seq
490 aa
AA seq
DB search
MADDLDIEAMLDAPYRKEDSKNQSPNGQEERPKRKKRSREKKRSREKKRSRSRERKRSRS
REKRRSRSRERRSSRERGGRYRDHHQQRRRSKTKSPVRKEKSPIRPPMDNLTPEERDART
VFCMQLAARIRPRDLEDFFSAVGKVRDVRMISDRNSRKSKGIAYIEFVETNSVPLAIGLT
GQRLLGVPIIVQASQAEKNRAAAAAAAANNLQKGSSGPMRLYVGSLHFNITEDMLRGIFE
PFGRIESIQLMMDSDTRQSKGYGFITFADAECAKKALDQLNGFELAGRPMKVGNVTERTD
AFASFLDSDELERSGIDLGTTGRLQLMARLAEGTGLQMPPAAQQALQMSGVIAMGAMAAV
SAAMNPNMQSSAPSVPSHPLATHCFQLSNMFHPSCEDPPGWEMDIQHDVIEECNKHGGVV
HIYIDKNSAEGNVYVKCPSIPAATAAVNALHGRYFAGKMITAAYVPLPTYHNLFPDSATN
SLQLSLPQRR
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgacctggacatcgaggccatgctggatgctccgtacagaaaggaggactcc
aagaaccaaagccctaacggacaagaggaacgccccaagaggaagaagcgcagccgggag
aagaagcgcagccgggagaagaagcgcagccggagccgcgagcgcaaacgcagccgcagc
agagagaagaggaggagtcgtagcagggagcgtcgcagcagcagggagagggggggccgc
tacagagaccaccaccagcaacgcaggcgttcaaagactaagagtcccgtcaggaaggag
aagagtccaatccggccgcccatggataacctgacaccagaggagcgcgatgcgcgcacg
gtgttctgcatgcagctggccgccaggataagacctcgagacctggaggatttcttttct
gctgtagggaaggttcgggatgtgaggatgatttcggacaggaactcccgcaagtccaag
ggcatcgcctacatcgagtttgtggagaccaactctgtccctctggccattggccttacg
gggcaaaggctgctgggagttcccatcatcgttcaggcctcgcaggcggaaaagaaccgt
gcagccgcagcggcggccgcagccaacaacctgcagaagggatcatcgggaccgatgagg
ctgtacgtcggctctctgcacttcaacatcactgaggacatgctgagagggatttttgag
ccgtttggacggattgagagcatccagctgatgatggacagtgacacaagacagtctaaa
ggctacggcttcatcacttttgcagatgctgagtgtgccaagaaagccctggatcagctg
aacggcttcgagctggcgggtcgacccatgaaggtgggtaatgtgactgagcgcaccgac
gccttcgcctccttcctggacagcgacgagcttgagcgcagcggcattgacctcgggacc
accggacgcctgcagctgatggcccggctggccgagggtactggtctacagatgcctccc
gccgctcagcaggctctgcagatgagcggcgtgatcgccatgggagccatggctgccgtg
tcagctgccatgaatccgaacatgcaatcttctgctccgagtgttccctctcacccgctc
gccacgcactgcttccaactgtccaacatgttccatcccagctgcgaggaccctcctggt
tgggagatggatatccagcacgatgtcatcgaggagtgcaacaaacatgggggagttgtt
cacatctacatcgacaagaactctgctgagggaaacgtttacgtgaagtgtccttcgatc
cccgctgctacggccgcagtcaacgctctgcacggacgatattttgctggtaagatgatc
acagcggcgtacgtcccgttgcccacctaccacaacctgttcccggactctgccaccaac
tcgctgcagctgtcccttccccagcgacggtga
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