Gasterosteus aculeatus (three-spined stickleback): 120834859
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Entry
120834859 CDS
T07457
Symbol
rbck1
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1 isoform X1
KO
K10630
RanBP-type and C3HC4-type zinc finger-containing protein 1 [EC:
2.3.2.31
]
Organism
gat
Gasterosteus aculeatus (three-spined stickleback)
Pathway
gat04217
Necroptosis
gat04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
gat00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
120834859 (rbck1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
120834859 (rbck1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gat04121
]
120834859 (rbck1)
Enzymes [BR:
gat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
120834859 (rbck1)
Ubiquitin system [BR:
gat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
120834859 (rbck1)
Multi subunit type E3
LUBAC complex
120834859 (rbck1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-RING_5
zf-C3HC4_2
zf-RING_2
zf-C3HC4
Zn_ribbon_RanBP
ubiquitin
IBR
zf-RING_11
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
120834859
NCBI-ProteinID:
XP_040059123
UniProt:
A0AAQ4P9P1
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All DBs
Position
XVII:complement(5078154..5085039)
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AA seq
615 aa
AA seq
DB search
MSTSCTWVSFTFLSPPADKSRRDSARHSSFWSSSPGCGLSGPRTGPTNYLSHLFLSPPPL
LRKPGSHADGAVTSQTTQGGTMASDVAARVALKEGSCDKAEAEELALSLSDALNSGNEQE
AVQLCQRLSKLSVPVCVSIDSQAYPQDSIRLRVGVEDAQSDTDIPLNVLVSPDMTIAQLK
EKINLDFGFHPSLQRWVIGKRLAQDRETLHSHGVRHNGDQAFLFILSAKAAHLHLHQHKQ
EQDQQRLDSIMESMQLLPRGPAKGGEKTADPLQYIPPSRPKHVPPAPPAPPCPRPKPAVP
AKPQMRWSCPICTFLNKPTRPGCEMCGEDRPDDYQVPDSYQPDQQEVLRIQLESLAVVQY
EEAQREERERNFQSLLATEDKNLIPNATEADCPICFSRLEAEEGVVLRECLHTFCRECLR
ATVVNSLEAEVSCPETCDSKLLDREIKALLTDEEHQRFLELRLSIAESRSEHSFHCQTAN
CRGWCIYEDEVNEFHCELCQQVNCILCRAIHTGMNCKDYQDDLRIRAENDQAAQQTKQML
ESLLQNKEAMKCPRCDIVIQKKDGCDWICCLMCKTEICWVTKQARWGPNGNGDTSGGCRC
RVDRKPCHPNCQNCH
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacttcctgtacttgggtgagtttcacttttctttctcccccagctgacaagtca
cggcgggactccgcgcgccacagcagcttctggtcttcgtctcctggctgtggactatct
ggaccccgaactggacccacgaactacctgtcccacctttttttaagcccccctcccctt
ttgaggaagccagggtctcatgcggacggtgcggtgacgtcacagaccacgcaaggtggg
acgatggcctctgacgttgcggcgagagtcgcgctgaaagaaggatcttgcgataaggca
gaagcggaggaactggccctctccctgagtgatgccctcaacagtgggaacgaacaggaa
gcggtccaactctgccagcggctgtccaagctctctgtcccagtgtgcgtcagcatcgac
agccaggcataccctcaggactccataaggttacgggtcggagtggaggatgctcagtcg
gacaccgacatccctctgaatgttttggtgtctcccgacatgacaatcgcacaacttaaa
gaaaagataaacctagatttcgggttccacccctcgctgcagcgctgggtgatcgggaag
cggttggctcaggaccgcgagacgttgcacagccacggcgtgcgtcacaacggagaccag
gccttcctgttcatcctctcggccaaagctgcccacctccatctgcaccaacacaagcag
gagcaggaccaacagcgtttagacagtatcatggagtccatgcaacttctacccagaggg
cctgcaaaaggtggtgagaagaccgctgatcctcttcaatacattcctccttctcgtccc
aaacacgttcctcctgctcctcctgctcctccttgtcctcgtcctaaacccgcggtgccg
gctaaacctcagatgcgctggtcctgccccatttgcacgttcctcaacaaacccacgcgc
cccggctgcgagatgtgtggggaagatcggccggacgactaccaggtgcctgacagttac
cagccggaccagcaggaggttcttcgaatccagctggaaagcctggccgtggttcagtac
gaagaggcccagcgggaggaacgagagaggaacttccagagtttgctggcaaccgaagac
aagaacctcatccccaacgccaccgaggcagactgtcctatctgcttctctcgcttagag
gcggaggagggcgttgtgctccgagagtgtctacacaccttctgcagggagtgtctcaga
gcgacagtcgtgaacagccttgaggcagaggtgtcctgtcctgagacatgcgacagcaag
ctgctggaccgagagatcaaagcgctgctgacggacgaggagcaccagcgcttcctggag
ctgcgtctgagcatcgcggagagccgctcggagcacagcttccactgtcagacggccaac
tgtcgcggctggtgcatctacgaggacgaggtcaatgagttccactgtgaactctgccag
caagtcaactgcattctctgccgggccatccatacgggcatgaattgcaaagactaccag
gacgacctgcgcatccgggcagaaaacgaccaggcggctcagcagacgaagcagatgctc
gagagcctgctacagaataaggaggccatgaaatgtccacggtgtgacatcgtcatccag
aaaaaagacggctgtgattggatctgctgtttgatgtgcaagacggaaatctgctgggtc
accaaacaagcccgctggggaccaaatggcaatggcgacacatctggcggctgtaggtgc
cgagtcgacagaaagccgtgccatcccaactgccaaaactgccactga
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