KEGG   Gasterosteus aculeatus (three-spined stickleback): 120834988
Entry
120834988         CDS       T07457                                 
Symbol
poc1a
Name
(RefSeq) POC1 centriolar protein homolog A
  KO
K16482  centriolar protein POC1
Organism
gat  Gasterosteus aculeatus (three-spined stickleback)
Brite
KEGG Orthology (KO) [BR:gat00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:gat03036]
    120834988 (poc1a)
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:gat03037]
    120834988 (poc1a)
Chromosome and associated proteins [BR:gat03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    120834988 (poc1a)
Cilium and associated proteins [BR:gat03037]
 Primary cilia and associated proteins
  Other primary cilia associated proteins
   120834988 (poc1a)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_IFT122_1st ANAPC4_WD40 Beta-prop_EIPR1 NBCH_WD40 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_IFT140_1st WD40_RFWD3 Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_Vps41 eIF2A Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_WDR35_TULP_N Beta-prop_HPS5 Ge1_WD40 Beta-prop_NWD2_C RMC1_N Beta-prop_NUP159_NUP214 Beta-prop_DCAF12 Beta-prop_Nup120_160 WD40_like PROPPIN Nucleoporin_N Beta-prop_WDR75_2nd DUF6491
Other DBs
NCBI-GeneID: 120834988
NCBI-ProteinID: XP_040059360
LinkDB
Position
XVII:6290128..6318308
AA seq 470 aa
MSSSPSDPTLERHFKGHRDNVTSVDFNCNMKQIATGSMDSCVMIWNMKTQMRAYRFEGHK
DAVLSVQFSPSGHLVASASRDKTVRLWVPSMKAESTAFRAHTATVRSVNFSGDGQNLVTA
SDDKTIKVWTVHRQKFLLSLNQHINWVRSAKFSPDDRLIVSSSDDKTIKLWDKNSRECIH
SFYEHSGYANYVDFHPSGTCIAAACTDNSVKVWDIRSHKMLQHYQVHSGAVNSLSFHPAG
NFLITASSDFTMKILDLLEGKLLYTLHGHQGRVSAVAFSRTGEYFASGGSDEQVMVWKSN
FDSAEDGDGVRLQHQTTSSLHPLASSCKAQPSISLHPCALRREASEPSEHFNGRDSHAAA
HTQSASRSVSHSTATPPHAHGPLGSAASSSAQRPPSRVSTQHPLRVAGTPGGGVPPGLAS
TLEHIVGQLDVLTQTVSILEQRLTLTEDKLQECLENQMEIGLHLQRPEEA
NT seq 1413 nt   +upstreamnt  +downstreamnt
atgtcttcgtccccgtctgatccaactctagaaagacatttcaagggccacagggacaat
gttacaagcgtggacttcaactgcaacatgaaacaaattgccacaggctctatggactcc
tgtgtgatgatatggaacatgaaaactcagatgcgagcgtatcgttttgagggacacaaa
gacgccgtcctctctgttcagttctctccgtccggccacctggtggcctctgcctccaga
gacaagactgttcgtctttgggtgcccagcatgaaggctgaatcgaccgctttcagggct
cacacggccaccgtgcgcagtgttaacttctctggtgatggacagaatctggtcacggcc
tccgacgacaagaccatcaaagtgtggaccgtccacaggcaaaagtttctcctctctctc
aaccagcacatcaactgggtccgttctgcaaaattttctccagacgatcgcttgattgtg
tcgtccagtgatgataagacaataaagctgtgggacaagaatagcagagagtgcattcat
tctttctatgagcattctggttatgcaaactatgtggacttccatccaagtggaacttgc
atcgctgcagcctgtactgacaactctgtgaaggtgtgggacatccggtcacataagatg
ctgcagcactaccaagtccacagcggtgcggtgaacagtttgtcgttccacccggccggt
aatttcctcataactgcgtcgagcgatttcacaatgaagatactggaccttctggagggg
aagctgctgtacacgctgcacggacaccagggtcgagtgagcgcagttgccttctccagg
acgggggagtactttgcctccggaggttctgatgaacaggtaatggtgtggaagagcaac
tttgactctgcggaggacggtgacggcgtcaggctgcagcatcaaactacttccagcttg
cacccactagcatccagctgcaaggctcagccctccatcagcttgcatccgtgcgcgctg
cgccgcgaggcttctgaaccatctgaacattttaatggacgggactcccacgccgccgcc
cacacgcagagcgccagtcgcagtgtcagccacagcacagcgactcctccccacgcccac
ggacccctcggcagcgccgcctcctcctccgcccagcggcctccgagccgcgtttcaaca
cagcaccccctccgggtcgcagggacgccggggggaggagtcccccctggtttagccagc
accctggaacacatcgtaggccagctggatgttctcactcagacggtttcgatcttggag
cagcgtctgacgctgacggaggacaagctccaggagtgtttggagaaccagatggagatc
ggtctgcatctccagagaccagaggaggcctaa

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